IndraLab

Statements


| 1 12
| 12

sparser
"It is known that Val328 and Phe332 of AMSH-LP interact with ubiquitin Ile44, but structural comparison shows that the equivalent positions in Rpn11 (Val83 and Phe87) are oriented in an opposite direction from AMSH-LP ( xref B)."

sparser
"Cys282 is next to the active site, and in fact it makes a van der Waals contact with Leu73 of the distal ubiquitin in the structure of AMSH-LP DUB domain bound to Lys63-linked ubiquitin dimer. xref In the disulfide orientation, however, as seen in the model of AMSH244 bound to Lys63-linked diubiquitin (please see below), the contact is lost."

sparser
"Interestingly, in the structure of AMSH-LP DUB domain bound to Lys63-linked ubiquitin dimer, the corresponding residue pair is still seen in a similar position as the substrate-free form, xref suggesting that these residues close the active site during catalysis as well, perhaps to help position the scissile peptide bond or stabilize the transition state or both."

sparser
"The Oγ atom of AMSH’s Ser346 is pointing away from Glu64 of the proximal ubiquitin ( xref ), contrary to the equivalent residue in both free and ubiquitin-bound AMSH-LP, which are at distances of 2.4Å and 2.6Å from proximal ubiquitin’s Glu64, respectively."

sparser
"The structural basis for this recognition was elucidated with the homologous protein, AMSH-LP, bound to Lys63-linked dimer of ubiquitin ( xref )."
| 4

sparser
"Proximal ubiquitin binding is similar to that observed in the crystal structure of AMSH-LP bound to K63-Ub 2 ."

sparser
"Figure xref d shows the superposition of Sst2 Δ220 –K63-Ub 2 and AMSH-LP bound to K63-Ub 2 (PDB entry 2ZNV( xref ))."

sparser
"The structure was determined by molecular replacement using a model of Sst2–K63-Ub 2 generated by superimposition of Sst2 cat with the structure of AMSH-LP bound to K63-Ub 2 (PDB entry 2ZNV( xref )) and refined yielding satisfactory crystallographic, free R factors and good stereochemistry (Table xref )."

sparser
"The overall three-dimensional fold of Sst2 Δ220 –K63-Ub 2 is highly similar to the structure of the DUB domain of AMSH-LP bound to K63-Ub 2 (PDB entry 2ZNV) with an rmsd of 1.19 Å of Cα atoms over 266 residues from both Sst2 and K63-Ub 2 ."
Ubiquitin binds STAMBPL1 and rpn11. 1 / 1
| 1

sparser
"Rpn11 and AMSH-LP bind ubiquitin in a similar orientation, but their interaction with the Ile44 hydrophobic patch is quite different."

sparser
"Thus, it is likely that BRCC36 and AMSH-LP bind K63-Ub 2 similarly."

sparser
"AMSH-LP binds the distal ubiquitin via its Leu8/Ile44/Val70 hydrophobic patch conserved in NEDD8."
STAMBPL1 increases the amount of Ubiquitin.
| 1
STAMBPL1 increases the amount of Ubiquitin. 1 / 1
| 1

reach
"Since our data clearly indicate that STAMBPL1 affects Snail stability via the proteasome, we assessed if the levels of the main ubiquitin ligases or DUBs involved in the regulation of Snail half-life are modulated by STAMBPL1."
STAMBPL1 affects BIRC5
| 8 4
STAMBPL1 binds BIRC5.
| 1 4
| 1 2

reach
"STAMBPL1 interacted with survivin and c-FLIP, resulted in reduction of ubiquitination."

sparser
"However, although cepharanthine reduces STAMBPL1 expression and overexpression of STAMBPL1 inhibits cepharanthine-mediated downregulation of survivin, interaction between STAMBPL1 and survivin was not investigated."

sparser
"As shown in xref C, we detected the interaction between STAMBPL1 and survivin."
| 2

sparser
"STAMBPL1 interacted with survivin and c-FLIP, resulted in reduction of ubiquitination."

sparser
"Thus, these data reveal that STAMBPL1 directly interacts with survivin and c-FLIP, resulting in stabilization of proteins."
STAMBPL1 inhibits BIRC5.
| 3
| 3

reach
"Ectopic expression of STAMBPL1 significantly inhibited CEP induced survivin downregulation (XREF_FIG F)."

reach
"Next, we investigated whether overexpression of STAMBPL1 prevents CEP induced survivin downregulation."

reach
"Honokiol Enhances TRAIL Mediated Apoptosis through STAMBPL1 Induced Survivin and c-FLIP Degradation."
STAMBPL1 activates BIRC5.
| 2
| 2

reach
"Knockdown of STAMBPL1 reduced survivin and c-FLIP protein levels, while overexpression of STAMBPL1 inhibited honokinol induced survivin and c-FLIP degradation."

reach
"Our findings provided that honokiol could overcome TRAIL resistance through survivin and c-FLIP degradation induced by inhibition of STAMBPL1 expression."
STAMBPL1 increases the amount of BIRC5.
| 1
STAMBPL1 increases the amount of BIRC5. 1 / 1
| 1

reach
"Cepharanthine Enhances TRAIL Mediated Apoptosis Through STAMBPL1 Mediated Downregulation of Survivin Expression in Renal Carcinoma Cells."
STAMBPL1 decreases the amount of BIRC5.
| 1
STAMBPL1 decreases the amount of BIRC5. 1 / 1
| 1

reach
"Knockdown of STAMBPL1 reduced survivin and c-FLIP protein levels, while overexpression of STAMBPL1 inhibited honokinol induced survivin and c-FLIP degradation."
UBD affects STAMBPL1
| 3 7
| 2 7

sparser
"The crystal structure of the catalytic domain of AMSH-LP bound to its substrate Lys63-linked diubiquitin (PBD ID: 2ZNV) reveals the flap adopting a closed position over the active site ( xref )."

sparser
"The crystal structure of the catalytic core domain of AMSH-LP bound to K63-linked diubiquitin has provided a molecular description of this specificity xref ."

sparser
"Only recently was Lys63-linkage specificity understood from the structural analysis of the DUB domain of AMSH-LP bound Lys63-linked diubiquitin. xref This structure reveals interactions between the enzyme and both the distal and proximal ubiquitins, but the basis for specificity arises from residues in the proximal site of the enzyme interacting with the proximal ubiquitin, despite a more extensive interaction with the distal ubiquitin (a significantly more accessible surface area is buried upon interaction with distal than proximal ubiquitin). xref Overall, AMSH adopts very similar interactions when modeled according to the ubiquitin-bound structure of AMSH-LP."

sparser
"The structure of AMSH-LP bound to K63-linked diubiquitin demonstrates that the recognition of the proximal ubiquitin in diubiquitin determines AMSH-LP linkage selectivity xref ."

sparser
"However, this residue, in fact, the two-residue turn segment, Leu402-Phe403, needs to move apart relative to Thr316 to make room for the diubiquitin substrate to position itself correctly in the active site. (These observations are also true in the structure of AMSH-LP bound to diubiquitin.) It seems likely that the β-turn segment is dynamic, fluctuating between open and closed forms; the substrate binds to the open form, perhaps by conformational selection."

sparser
"Modeling of the catalytic domain of AMSH onto the structure of AMSH-LP bound to Lys63-linked diubiquitin revealed four residues within AMSH (Thr341, Phe343, Ser346, and Phe395) that could determine its specificity for Lys63-linked polyubiquitin chains by recognizing the tri-peptide sequence motif Gln62-Lys63-Glu64 within the proximal ubiquitin, which encompasses the acceptor Lys63 and its two immediate flanking residues."

sparser
"How JAMM/MPNDUBs cleave ubiquitin chains with K63-linkage specificity has been explained by the crystal structure of AMSH-LP bound to K63-linked di-ubiquitin: Two insertion loops orient the distal and proximal ubiquitin in order to place the isopeptide bond at lysine 63 in direct proximity to the active site [ xref ]."

reach
"Recent structure determination of the K63 linked diubiquitin bound to AMSH-LP revealed specific interactions between the proximal ubiquitin and the DUB catalytic core as well as an inserted motif."

reach
"(These observations are also true in the structure of AMSH-LP bound to diubiquitin.)"
UBD binds STAMBPL1 and Phe403. 1 / 1
| 1

reach
"X-ray crystal structures of the DUB domains of both AMSH-LP and Sst2 bound to diubiquitin shows Phe403 collapsed onto the Lys63 side chain of the proximal ubiquitin; however, the flap residues appear to retain their mobility even in presence of bound substrate or product (indicated by relatively weak electron density enveloping these residues and higher B-factors than internal residues)."
STAMBPL1 affects STAMBP
1 | 3 6
STAMBPL1 binds STAMBP.
1 | 1 5
1 | 1 3

sparser
"To quantify the interaction of the UbVs with STAMBP and STAMBPL1 and to validate the key residues responsible for the tight binding, we used isothermal titration calorimetry (ITC) to measure the interaction thermodynamics (Fig. 3)."

reach
"Both STAMBP and STAMBPL1 localize to early endosomes by binding to clathrin (31); however, STAMBPL1 fails to bind to STAM due to residue substitutions in the SBM-like motif, suggesting it may function in different signaling pathway from that of STAMBP (30) ."
| DOI

sparser
"Hameed et al. developed a zinc chelating ABP that forms a tight complex with STAMBP and STAMBPL1 and inhibits the activity of the proteasomal DUB Rpn11 (PSMD14 in humans)."

sparser
"Hence, it is possible that AMSH and AMSH-LP might be associated with a proteasome or other unknown large protein complex in the nucleus through their MPN domain."

No evidence text available
| 1

sparser
"Hameed et al. developed a zinc chelating ABP that forms a tight complex with STAMBP and STAMBPL1 and inhibits the activity of the proteasomal DUB Rpn11 (PSMD14 in humans)."

sparser
"We further show that AMSH and AMSH-LP bind to the terminal domain of clathrin heavy chain via a novel clathrin-binding site conserved between these proteins."
STAMBPL1 inhibits STAMBP.
| 2
| 2

reach
"Next, we compared the K63-diUb (FRET) cleavage inhibition by the UbVs with STAMBP JAMM to the inhibition of fulllength STAMBP activated by STAM protein and full-length STAMBPL1."
| DOI

reach
"Next, we compared the K63-diUb (FRET) cleavage inhibition by the UbVs with STAMBPJAMM to the inhibition of full-length STAMBP activated by STAM protein and full-length STAMBPL1."
STAMBPL1 activates STAMBP.
| 1
| 1

sparser
"Next, we compared the K63-diUb (FRET) cleavage inhibition by the UbVs with STAMBPJAMM to the inhibition of full-length STAMBP activated by STAM protein and full-length STAMBPL1."
STAMBPL1 affects SNAI1
| 2 6
STAMBPL1 binds SNAI1.
| 6

sparser
"Hence, we analysed 35 additional human tumour types for a STAMBPL1-SNAI1 co-signature (Fig.  xref )."

sparser
"A significant STAMBPL1-SNAI1 co-signature was observed across multiple tumour types."

sparser
"Prevalence of a STAMBPL1-SNAI1 co-signature across a spectrum of tumour types."

sparser
"Altogether, these data highlight the prevalence of the identified STAMBPL1-SNAI1 association across an extensive number of tumours types."

sparser
"While our study does not address the mechanistic details on this regulation, we uncover a substantial STAMBPL1-SNAI1 link across multiple human tumours."

sparser
"Importantly, we found that 24 tumour types showed a positive correlation, out of which >4000 samples in 12 TCGA tumours displayed a significant STAMBPL1-SNAI1 co-expression profile (Fig.  xref )."
STAMBPL1 inhibits SNAI1.
| 1
| 1

reach
"By downregulating the level of Ubiquitin using RNA interference-mediated knockdown of Ubb and Ubc, we found that knockdown of UbC that instructs tandem units of ubiquitin with nine repeats resulted in more efficient attenuation of both K48 and total and mono-Ub levels without affecting STAMBPL1 levels (Supplementary Fig. S3e) and that downregulation of UbC effectively hindered STAMBPL1-mediated Snail protein reduction (Fig. 4i)."
STAMBPL1 activates SNAI1.
| 1
| 1

reach
"Since STAMBPL1 has been shown to be an indirect activator of nuclear factor-κB) (NF-κB) signalling, and given that this pathway promotes Snail stabilisation through the synthesis of COP9 signalosome 2 protein (CSN2), we assessed if CSN2 is relevant for STAMBPL1 effect on Snail."
STAMBPL1 is modified
6 | 2
STAMBPL1 is phosphorylated.
6 |
STAMBPL1 is phosphorylated on S242. 3 / 3
3 |

No evidence text available

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STAMBPL1 is phosphorylated on S400. 1 / 1
1 |

No evidence text available
STAMBPL1 is phosphorylated on T392. 1 / 1
1 |

No evidence text available
STAMBPL1 is phosphorylated on S25. 1 / 1
1 |

No evidence text available
STAMBPL1 is methylated.
| 2
STAMBPL1 is methylated. 2 / 2
| 2

sparser
"We found that dysregulation of miR-29C, miR-34A, miR-98, and miR-215; and methylation of ANKRD1, ARID5B, CDCA2, PIF1, STAMBPL1, TROAP, ZNF165 , and HIST1H2AJ in HeLa cells could result in cell proliferation and anti-apoptosis through NFκB, TGF-β, and PI3K pathways."

sparser
"It has been reported that NUF2, TROAP, STAMBPL1 , and ARID5B can be methylated in cancers. xref Furthermore, we used the DNA methylation profile of human cervical cancer and ESCs to validate our findings."
STAMBPL1 affects CFLAR
| 4 3
STAMBPL1 binds CFLAR.
| 1 3
| 2

sparser
"STAMBPL1 interacted with survivin and c-FLIP, resulted in reduction of ubiquitination."

sparser
"Thus, these data reveal that STAMBPL1 directly interacts with survivin and c-FLIP, resulting in stabilization of proteins."
| 1 1

sparser
"In addition, STAMBPL1 also bound endogenous c-FLIP in Caki cells ( xref D)."

reach
"STAMBPL1 interacted with survivin and c-FLIP, resulted in reduction of ubiquitination."
STAMBPL1 activates CFLAR.
| 2
| 2

reach
"Our findings provided that honokiol could overcome TRAIL resistance through survivin and c-FLIP degradation induced by inhibition of STAMBPL1 expression."

reach
"Knockdown of STAMBPL1 reduced survivin and c-FLIP protein levels, while overexpression of STAMBPL1 inhibited honokinol induced survivin and c-FLIP degradation."
STAMBPL1 decreases the amount of CFLAR.
| 1
STAMBPL1 decreases the amount of CFLAR. 1 / 1
| 1

reach
"Knockdown of STAMBPL1 reduced survivin and c-FLIP protein levels, while overexpression of STAMBPL1 inhibited honokinol induced survivin and c-FLIP degradation."
STAMBP affects STAMBPL1
1 | 1 5
1 | 1 3

sparser
"To quantify the interaction of the UbVs with STAMBP and STAMBPL1 and to validate the key residues responsible for the tight binding, we used isothermal titration calorimetry (ITC) to measure the interaction thermodynamics (Fig. 3)."

reach
"Both STAMBP and STAMBPL1 localize to early endosomes by binding to clathrin (31); however, STAMBPL1 fails to bind to STAM due to residue substitutions in the SBM-like motif, suggesting it may function in different signaling pathway from that of STAMBP (30) ."
| DOI

sparser
"Hameed et al. developed a zinc chelating ABP that forms a tight complex with STAMBP and STAMBPL1 and inhibits the activity of the proteasomal DUB Rpn11 (PSMD14 in humans)."

sparser
"Hence, it is possible that AMSH and AMSH-LP might be associated with a proteasome or other unknown large protein complex in the nucleus through their MPN domain."

No evidence text available
| 1

sparser
"Hameed et al. developed a zinc chelating ABP that forms a tight complex with STAMBP and STAMBPL1 and inhibits the activity of the proteasomal DUB Rpn11 (PSMD14 in humans)."

sparser
"We further show that AMSH and AMSH-LP bind to the terminal domain of clathrin heavy chain via a novel clathrin-binding site conserved between these proteins."
SNAI1 affects STAMBPL1
| 1 6
SNAI1 binds STAMBPL1.
| 6

sparser
"Hence, we analysed 35 additional human tumour types for a STAMBPL1-SNAI1 co-signature (Fig.  xref )."

sparser
"A significant STAMBPL1-SNAI1 co-signature was observed across multiple tumour types."

sparser
"Prevalence of a STAMBPL1-SNAI1 co-signature across a spectrum of tumour types."

sparser
"Altogether, these data highlight the prevalence of the identified STAMBPL1-SNAI1 association across an extensive number of tumours types."

sparser
"While our study does not address the mechanistic details on this regulation, we uncover a substantial STAMBPL1-SNAI1 link across multiple human tumours."

sparser
"Importantly, we found that 24 tumour types showed a positive correlation, out of which >4000 samples in 12 TCGA tumours displayed a significant STAMBPL1-SNAI1 co-expression profile (Fig.  xref )."
SNAI1 inhibits STAMBPL1.
| 1
| 1

reach
"By genetically depleting STAMBPL1 in these cells, we observed a primary effect on Snail protein levels (Fig. 4b)."
| 2 4
| 2 2

eidos
"Recently , we reported the depletion of STAMBPL1 increases apoptotic cell death through accumulation of intracellular ROS and lysosome-dependent XIAP degradation in prostate cancer cells [ 34 ] , and we also reported that levels of STAMBPL1 is correlated with the expression of survivin in cepharanthine treated renal cancer cells [ 35 ] ."

eidos
"In response to genotoxic stress , the degradation of STAMBPL1 augments apoptotic cell death ."

reach
"Targeting the Deubiquitinase STAMBPL1 Triggers Apoptosis in Prostate Cancer Cells by Promoting XIAP Degradation."

reach
"In response to genotoxic stress, the degradation of STAMBPL1 augments apoptotic cell death."
| 2

reach
"STAMBPL1 RNAi depletion triggered caspase-3/-7-dependent apoptosis in PC3 and DU145 cells."

reach
"Taken together, these studies show that STAMBPL1 depletion induces apoptosis by promoting XIAP lysosomal degradation, and suggest that targeting deubiquitinase STAMBPL1 might offer promising therapeutic strategy for prostate cancer."
STAMBPL1 affects K63-Ub 2
| 6
STAMBPL1 binds K63-Ub 2. 5 / 5
| 5

reach
"Figure XREF_FIG d shows the superposition of Sst2 Delta220 -K63-Ub 2 and AMSH-LP bound to K63-Ub 2 (PDB entry 2ZNV)."

reach
"Proximal ubiquitin binding is similar to that observed in the crystal structure of AMSH-LP bound to K63-Ub 2."

reach
"Thus, it is likely that BRCC36 and AMSH-LP bind K63-Ub 2 similarly.Comparison of the BRCC36 homodimer and heterodimer structures suggests an explanation for the loss of catalytic activity in the homod[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

reach
"The structure was determined by molecular replacement using a model of Sst2-K63-Ub 2 generated by superimposition of Sst2 cat with the structure of AMSH-LP bound to K63-Ub 2 (PDB entry 2ZNV) and refined yielding satisfactory crystallographic, free R factors and good stereochemistry."

reach
"Thus, it is likely that BRCC36 and AMSH-LP bind K63-Ub 2 similarly."
STAMBPL1 binds DUB domain and K63-Ub 2. 1 / 1
| 1

reach
"The overall three-dimensional fold of Sst2 Delta220 -K63-Ub 2 is highly similar to the structure of the DUB domain of AMSH-LP bound to K63-Ub 2 (PDB entry 2ZNV) with an rmsd of 1.19 A of Calpha atoms over 266 residues from both Sst2 and K63-Ub 2."
STAMBPL1 affects K63
| 6
| 4

sparser
"Proximal ubiquitin binding is similar to that observed in the crystal structure of AMSH-LP bound to K63-Ub 2 ."

sparser
"Figure xref d shows the superposition of Sst2 Δ220 –K63-Ub 2 and AMSH-LP bound to K63-Ub 2 (PDB entry 2ZNV( xref ))."

sparser
"The structure was determined by molecular replacement using a model of Sst2–K63-Ub 2 generated by superimposition of Sst2 cat with the structure of AMSH-LP bound to K63-Ub 2 (PDB entry 2ZNV( xref )) and refined yielding satisfactory crystallographic, free R factors and good stereochemistry (Table xref )."

sparser
"The overall three-dimensional fold of Sst2 Δ220 –K63-Ub 2 is highly similar to the structure of the DUB domain of AMSH-LP bound to K63-Ub 2 (PDB entry 2ZNV) with an rmsd of 1.19 Å of Cα atoms over 266 residues from both Sst2 and K63-Ub 2 ."

sparser
"Thus, it is likely that BRCC36 and AMSH-LP bind K63-Ub 2 similarly."
| 1

sparser
"In contrast, AMSH-LP and its yeast homolog Sst2 bind K63 diUb with K M of ~ 50 μM and k cat of ~ 1 s − 1 , substantiall[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
K63-Ub 2 affects STAMBPL1
| 6
STAMBPL1 binds K63-Ub 2. 5 / 5
| 5

reach
"Figure XREF_FIG d shows the superposition of Sst2 Delta220 -K63-Ub 2 and AMSH-LP bound to K63-Ub 2 (PDB entry 2ZNV)."

reach
"Proximal ubiquitin binding is similar to that observed in the crystal structure of AMSH-LP bound to K63-Ub 2."

reach
"Thus, it is likely that BRCC36 and AMSH-LP bind K63-Ub 2 similarly.Comparison of the BRCC36 homodimer and heterodimer structures suggests an explanation for the loss of catalytic activity in the homod[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

reach
"The structure was determined by molecular replacement using a model of Sst2-K63-Ub 2 generated by superimposition of Sst2 cat with the structure of AMSH-LP bound to K63-Ub 2 (PDB entry 2ZNV) and refined yielding satisfactory crystallographic, free R factors and good stereochemistry."

reach
"Thus, it is likely that BRCC36 and AMSH-LP bind K63-Ub 2 similarly."
STAMBPL1 binds DUB domain and K63-Ub 2. 1 / 1
| 1

reach
"The overall three-dimensional fold of Sst2 Delta220 -K63-Ub 2 is highly similar to the structure of the DUB domain of AMSH-LP bound to K63-Ub 2 (PDB entry 2ZNV) with an rmsd of 1.19 A of Calpha atoms over 266 residues from both Sst2 and K63-Ub 2."
K63 affects STAMBPL1
| 6
| 4

sparser
"Proximal ubiquitin binding is similar to that observed in the crystal structure of AMSH-LP bound to K63-Ub 2 ."

sparser
"Figure xref d shows the superposition of Sst2 Δ220 –K63-Ub 2 and AMSH-LP bound to K63-Ub 2 (PDB entry 2ZNV( xref ))."

sparser
"The structure was determined by molecular replacement using a model of Sst2–K63-Ub 2 generated by superimposition of Sst2 cat with the structure of AMSH-LP bound to K63-Ub 2 (PDB entry 2ZNV( xref )) and refined yielding satisfactory crystallographic, free R factors and good stereochemistry (Table xref )."

sparser
"The overall three-dimensional fold of Sst2 Δ220 –K63-Ub 2 is highly similar to the structure of the DUB domain of AMSH-LP bound to K63-Ub 2 (PDB entry 2ZNV) with an rmsd of 1.19 Å of Cα atoms over 266 residues from both Sst2 and K63-Ub 2 ."

sparser
"Thus, it is likely that BRCC36 and AMSH-LP bind K63-Ub 2 similarly."
| 1

sparser
"In contrast, AMSH-LP and its yeast homolog Sst2 bind K63 diUb with K M of ~ 50 μM and k cat of ~ 1 s − 1 , substantiall[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
5 |
Valproic acid decreases the amount of STAMBPL1.
4 |
Valproic acid decreases the amount of STAMBPL1. 4 / 4
4 |

No evidence text available

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Valproic acid increases the amount of STAMBPL1.
1 |
Valproic acid increases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
Ubiquitin affects K63
| 5
| 4

sparser
"Proximal ubiquitin binding is similar to that observed in the crystal structure of AMSH-LP bound to K63-Ub 2 ."

sparser
"Figure xref d shows the superposition of Sst2 Δ220 –K63-Ub 2 and AMSH-LP bound to K63-Ub 2 (PDB entry 2ZNV( xref ))."

sparser
"The structure was determined by molecular replacement using a model of Sst2–K63-Ub 2 generated by superimposition of Sst2 cat with the structure of AMSH-LP bound to K63-Ub 2 (PDB entry 2ZNV( xref )) and refined yielding satisfactory crystallographic, free R factors and good stereochemistry (Table xref )."

sparser
"The overall three-dimensional fold of Sst2 Δ220 –K63-Ub 2 is highly similar to the structure of the DUB domain of AMSH-LP bound to K63-Ub 2 (PDB entry 2ZNV) with an rmsd of 1.19 Å of Cα atoms over 266 residues from both Sst2 and K63-Ub 2 ."

sparser
"Thus, it is likely that BRCC36 and AMSH-LP bind K63-Ub 2 similarly."
STAMBPL1 affects STAM
| 5
| 3

sparser
"These results indicate that, unlike AMSH, AMSH-LP cannot bind to the STAMs."

sparser
"We observed a significant enhancement of IL-2-mediated c- myc induction in AMSH-LP-transfected cells as well as AMSH-transfected cells, although AMSH-LP did not associate physically with either STAM [MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"We addressed whether the SBM-like motif of AMSH-LP could bind STAM1."
| 1

sparser
"Consistent with this, coimmunoprecipitation analyses revealed that AMSH-LP could not bind to STAM1, STAM2, or Grb2, all of which contain an SH3 domain that interacts with AMSH [2,3,11] ."
| 1

sparser
"Another STAM family protein, STAM2, did not bind to AMSH-LP either, although AMSH strongly binds to STAM2 (data not shown)."
STAMBPL1 affects CLTC
4 | 1
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No evidence text available

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sparser
"We further show that AMSH and AMSH-LP bind to the terminal domain of clathrin heavy chain via a novel clathrin-binding site conserved between these proteins."
STAM affects STAMBPL1
| 5
| 3

sparser
"These results indicate that, unlike AMSH, AMSH-LP cannot bind to the STAMs."

sparser
"We observed a significant enhancement of IL-2-mediated c- myc induction in AMSH-LP-transfected cells as well as AMSH-transfected cells, although AMSH-LP did not associate physically with either STAM [MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"We addressed whether the SBM-like motif of AMSH-LP could bind STAM1."
| 1

sparser
"Consistent with this, coimmunoprecipitation analyses revealed that AMSH-LP could not bind to STAM1, STAM2, or Grb2, all of which contain an SH3 domain that interacts with AMSH [2,3,11] ."
| 1

sparser
"Another STAM family protein, STAM2, did not bind to AMSH-LP either, although AMSH strongly binds to STAM2 (data not shown)."
K63 affects Ubiquitin
| 5
| 4

sparser
"Proximal ubiquitin binding is similar to that observed in the crystal structure of AMSH-LP bound to K63-Ub 2 ."

sparser
"Figure xref d shows the superposition of Sst2 Δ220 –K63-Ub 2 and AMSH-LP bound to K63-Ub 2 (PDB entry 2ZNV( xref ))."

sparser
"The structure was determined by molecular replacement using a model of Sst2–K63-Ub 2 generated by superimposition of Sst2 cat with the structure of AMSH-LP bound to K63-Ub 2 (PDB entry 2ZNV( xref )) and refined yielding satisfactory crystallographic, free R factors and good stereochemistry (Table xref )."

sparser
"The overall three-dimensional fold of Sst2 Δ220 –K63-Ub 2 is highly similar to the structure of the DUB domain of AMSH-LP bound to K63-Ub 2 (PDB entry 2ZNV) with an rmsd of 1.19 Å of Cα atoms over 266 residues from both Sst2 and K63-Ub 2 ."

sparser
"Thus, it is likely that BRCC36 and AMSH-LP bind K63-Ub 2 similarly."
CLTC affects STAMBPL1
4 | 1
4 |

No evidence text available

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sparser
"We further show that AMSH and AMSH-LP bind to the terminal domain of clathrin heavy chain via a novel clathrin-binding site conserved between these proteins."
BIRC5 affects STAMBPL1
| 1 4
| 1 2

reach
"STAMBPL1 interacted with survivin and c-FLIP, resulted in reduction of ubiquitination."

sparser
"However, although cepharanthine reduces STAMBPL1 expression and overexpression of STAMBPL1 inhibits cepharanthine-mediated downregulation of survivin, interaction between STAMBPL1 and survivin was not investigated."

sparser
"As shown in xref C, we detected the interaction between STAMBPL1 and survivin."
| 2

sparser
"STAMBPL1 interacted with survivin and c-FLIP, resulted in reduction of ubiquitination."

sparser
"Thus, these data reveal that STAMBPL1 directly interacts with survivin and c-FLIP, resulting in stabilization of proteins."
K63 affects STAMBPL1, and Ubiquitin
| 4
| 4

sparser
"Proximal ubiquitin binding is similar to that observed in the crystal structure of AMSH-LP bound to K63-Ub 2 ."

sparser
"Figure xref d shows the superposition of Sst2 Δ220 –K63-Ub 2 and AMSH-LP bound to K63-Ub 2 (PDB entry 2ZNV( xref ))."

sparser
"The structure was determined by molecular replacement using a model of Sst2–K63-Ub 2 generated by superimposition of Sst2 cat with the structure of AMSH-LP bound to K63-Ub 2 (PDB entry 2ZNV( xref )) and refined yielding satisfactory crystallographic, free R factors and good stereochemistry (Table xref )."

sparser
"The overall three-dimensional fold of Sst2 Δ220 –K63-Ub 2 is highly similar to the structure of the DUB domain of AMSH-LP bound to K63-Ub 2 (PDB entry 2ZNV) with an rmsd of 1.19 Å of Cα atoms over 266 residues from both Sst2 and K63-Ub 2 ."
Honokiol affects STAMBPL1
| 4
| 4

eidos
"In our study , the honokiol inhibited STAMBPL1 expression ( Figure 5B ) ."

eidos
"Honokiol induced STAMBPL1 downregulation in tested cancer cells ( ACHN , A498 , A549 , and Hela cells ) ( Figure 6E ) ."

eidos
"Therefore , we tested alteration of various DUBs expression and discovered that honokiol only decreased STAMBPL1 which is classified as JAMM family ( Figure 5B ) ."

eidos
"Honokiol decreased STAMBPL1 expression , resulting in degradation of survivin and c-FLIP protein ."
CFLAR affects STAMBPL1
| 1 3
| 2

sparser
"STAMBPL1 interacted with survivin and c-FLIP, resulted in reduction of ubiquitination."

sparser
"Thus, these data reveal that STAMBPL1 directly interacts with survivin and c-FLIP, resulting in stabilization of proteins."
| 1 1

sparser
"In addition, STAMBPL1 also bound endogenous c-FLIP in Caki cells ( xref D)."

reach
"STAMBPL1 interacted with survivin and c-FLIP, resulted in reduction of ubiquitination."
3 |
Cyclosporin A increases the amount of STAMBPL1. 3 / 3
3 |

No evidence text available

No evidence text available

No evidence text available
TP53 affects STAMBPL1
| 2 1
TP53 activates STAMBPL1.
| 1 1
Mutated TP53 activates STAMBPL1. 1 / 1
| 1

reach
"Thus, the mechanism by which mutant p53 might activate STAMBPL1 is therefore likely through its interaction with these TFs, which possess responsive to mutant p53."
TP53 activates STAMBPL1. 1 / 1
| 1

sparser
"Thus, the mechanism by which mutant p53 might activate STAMBPL1 is therefore likely through its interaction with these TFs, which possess responsive to mutant p53. xref – xref Although future studies are needed to delineate whether other DUBs are involved in mutant p53-induced EMT or to other mutant p53-mediated oncogenic pro-survival benefits (ref. xref , xref ), our findings suggest an involvement of mutant p53 in driving the expression of STAMBPL1 as a novel pro-EMT GOF, providing further rationale to investigate DUB expression by other oncoproteins."
TP53 increases the amount of STAMBPL1.
| 1
TP53 increases the amount of STAMBPL1. 1 / 1
| 1

reach
"While ChIP assay revealed p53 enrichment on MDM2 and CDKN1A promoters in p53 -expressing cells (up to ~4% and ~10% of input), no significant (>1%) occupancy on any of the six predicted was detected for either WT or p53 (Supplementary Fig. S5c), indicating that the expression of STAMBPL1 gene is not directly regulated by p53 ."
STAMBPL1 affects Tax
| 3
STAMBPL1 activates Tax.
| 2
STAMBPL1 activates Tax. 2 / 2
| 2

reach
"Furthermore, overexpression of STAMBPL1 enhances the stability of Tax by blocking its proteasomal degradation, whereas siRNA silencing of STAMBPL1 promotes Tax degradation."
| PMC

reach
"Silencing of STAMBPL1 with siRNA inhibits Tax activation of both the canonical and noncanonical NF-kappaB signaling pathways."
| PMC
STAMBPL1 deubiquitinates Tax.
| 1
STAMBPL1 leads to the deubiquitination of Tax. 1 / 1
| 1

reach
"Importantly, STAMBPL1 does not induce Tax de-ubiquitination but protects Tax from degradation."
STAMBPL1 affects SMAD7
1 | 1 1
STAMBPL1 binds SMAD7.
1 | 1
| 1

sparser
"Previous studies reported that although they did not investigate the DUB activity of STAMBPL1, STAMBPL1 interact with Smad2 and Smad7, followed by induction of TGF-β-mediated transcriptional activity [ xref ]."

No evidence text available
STAMBPL1 inhibits SMAD7.
| 1
| 1

reach
"Similarly, AMSH-LP has been reported to sequester SMAD7, thereby exerting a positive impact on the TGFbeta pathway (XREF_FIG C) XREF_BIBR."
STAMBPL1 affects NFkappaB
| 2
| 1

reach
"Silencing of STAMBPL1 with siRNA inhibits Tax activation of both the canonical and noncanonical NF-kappaB signaling pathways."
| PMC
Modified STAMBPL1 activates NFkappaB. 1 / 1
| 1

reach
"Overexpression of wild-type STAMBPL1, but not a catalytically inactive mutant, enhances Tax mediated NF-kappaB activation and the induction of NF-kappaB target genes."
| PMC
STAMBPL1 affects DUSP1
| 2 1
STAMBPL1 binds DUSP1.
| 1 1
| 1 1

reach
"STAMBPL1 interacts with MKP-1 and stabilizes MKP-1 via deubiquitination."

sparser
"STAMBPL1 interacts with MKP-1 and stabilizes MKP-1 via deubiquitination."
STAMBPL1 increases the amount of DUSP1.
| 1
STAMBPL1 increases the amount of DUSP1. 1 / 1
| 1

reach
"STAMBPL1 promotes breast cancer cell resistance to cisplatin partially by stabilizing MKP-1 expression."
Sst2 affects STAMBPL1
| 1 1
| 1

reach
"In contrast, AMSH-LP and its yeast homologue Sst2 bind K63 diUb with K M ~ 50 muM, and k cat ~ 1 s -1, substantially below the catalytic proficiency associated with cleavage of some small peptides by thermolysin."
| 1

sparser
"In contrast, AMSH-LP and its yeast homolog Sst2 bind K63 diUb with K M of ~ 50 μM and k cat of ~ 1 s − 1 , substantiall[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
Silicon dioxide increases the amount of STAMBPL1.
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Silicon dioxide increases the amount of STAMBPL1. 1 / 1
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No evidence text available
Silicon dioxide decreases the amount of STAMBPL1.
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Silicon dioxide decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
DiUb affects STAMBPL1
| 2
STAMBPL1 binds diUb. 2 / 2
| 2

reach
"(E) A comparison of the diUb/STAMBPL1 complex structure (left) and UbV/STAMBPL1 structure overlaid with diUb (right)."
| DOI

reach
"E, a comparison of the diUb/STAMBPL1 complex structure (left) and UbV/STAMBPL1 structure overlaid with diUb (right)."
2 |
Cisplatin increases the amount of STAMBPL1.
1 |
Cisplatin increases the amount of STAMBPL1. 1 / 1
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No evidence text available
Cisplatin decreases the amount of STAMBPL1.
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Cisplatin decreases the amount of STAMBPL1. 1 / 1
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No evidence text available
2 |
Bisphenol A increases the amount of STAMBPL1.
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Bisphenol A increases the amount of STAMBPL1. 1 / 1
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No evidence text available
Bisphenol A decreases the amount of STAMBPL1.
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Bisphenol A decreases the amount of STAMBPL1. 1 / 1
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No evidence text available
2 |
Aflatoxin B1 methylates STAMBPL1.
1 |
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No evidence text available
Aflatoxin B1 increases the amount of STAMBPL1.
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Aflatoxin B1 increases the amount of STAMBPL1. 1 / 1
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No evidence text available
UbVSP.1 affects STAMBPL1
| 2
UbVSP.1 inhibits STAMBPL1.
| 1
UbVSP.1 inhibits STAMBPL1. 1 / 1
| 1

reach
"In addition, UbVSP.1 appeared to inhibit STAMBPL1 to some extent, whereas UbVSP.3 showed no inhibitory effect with STAMBPL1 (Fig. S2A)."
UbVSP.1 binds STAMBPL1.
| 1
STAMBPL1 binds UbVSP.1. 1 / 1
| 1

reach
"A strong hydrogen bond network is then formed between the Arg72 guanidinium and the backbone carbonyl group of Glu326 in ins-1 and between the amide group of Gln49 of UbVSP.1 with the backbone carbonyl and amide of Val328 and Glu326, thus stabilizing the interaction between the STAMBPL1 and UbVSP.1 (Fig. 2G)."
TRIP13 affects STAMBPL1
1 1 |
1 1 |

No evidence text available

No evidence text available
STAMBPL1 affects sst2
| 1 1
| 1

reach
"In contrast, AMSH-LP and its yeast homologue Sst2 bind K63 diUb with K M ~ 50 muM, and k cat ~ 1 s -1, substantially below the catalytic proficiency associated with cleavage of some small peptides by thermolysin."
| 1

sparser
"In contrast, AMSH-LP and its yeast homolog Sst2 bind K63 diUb with K M of ~ 50 μM and k cat of ~ 1 s − 1 , substantiall[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
STAMBPL1 affects diUb
| 2
STAMBPL1 binds diUb. 2 / 2
| 2

reach
"(E) A comparison of the diUb/STAMBPL1 complex structure (left) and UbV/STAMBPL1 structure overlaid with diUb (right)."
| DOI

reach
"E, a comparison of the diUb/STAMBPL1 complex structure (left) and UbV/STAMBPL1 structure overlaid with diUb (right)."
STAMBPL1 affects TRIP13
1 1 |
1 1 |

No evidence text available

No evidence text available
STAMBPL1 affects STAM2
| 2
| 1

sparser
"Consistent with this, coimmunoprecipitation analyses revealed that AMSH-LP could not bind to STAM1, STAM2, or Grb2, all of which contain an SH3 domain that interacts with AMSH [2,3,11] ."
| 1

sparser
"Another STAM family protein, STAM2, did not bind to AMSH-LP either, although AMSH strongly binds to STAM2 (data not shown)."
STAMBPL1 affects SMAD2
1 | 1
| 1

sparser
"Previous studies reported that although they did not investigate the DUB activity of STAMBPL1, STAMBPL1 interact with Smad2 and Smad7, followed by induction of TGF-β-mediated transcriptional activity [ xref ]."

No evidence text available
STAMBPL1 affects RNF32
2 |

No evidence text available

No evidence text available
STAMBPL1 affects RAB2A
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No evidence text available

No evidence text available
STAMBPL1 affects MTOR
| 2
STAMBPL1 activates MTOR. 2 / 2
| 2

reach
"We talk to first authors Dong Wang and Chenchen Xu about their paper, "E3 ligase RNF167 and deubiquitinase STAMBPL1 modulate mTOR and cancer progression," and group leader Ying Liu about how the research in her lab in Beijing has evolved, how curiosity is key, and the guilt involved with being a female scientist and mother and how reprioritizing helps her juggle."

reach
"E3 ligase RNF167 and deubiquitinase STAMBPL1 modulate mTOR and cancer progression."
STAMBPL1 affects GTSE1
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No evidence text available

No evidence text available
STAMBPL1 affects GAK
2 |
2 |

No evidence text available

No evidence text available
STAMBPL1 affects FAS
| 2
| 2

sparser
"STAMBPL1-FAS fusion isoform was identified in sample 1 M (metastasis cancer) and 2 M (the metastasis cancer): XM_011539985 from STAMBPL1 and XM_011539766.2 from FAS (Fig.  xref )."

sparser
"However, subsequent analysis using Taqman qPCR showed that the STAMBPL1-FAS fusion isoform can be found in all 6 cancer samples (Supplementary Fig.  xref ), implying a wider distribution of this gene fusion in colon cancers."
STAMBPL1 affects Clathrin
| 1 1

reach
"Both STAMBP and STAMBPL1 localize to early endosomes by binding to clathrin (31); however, STAMBPL1 fails to bind to STAM due to residue substitutions in the SBM-like motif, suggesting it may function in different signaling pathway from that of STAMBP (30) ."
| DOI

sparser
"We further show that AMSH and AMSH-LP bind to the terminal domain of clathrin heavy chain via a novel clathrin-binding site conserved between these proteins."
STAMBPL1 affects CLINT1
2 |

No evidence text available

No evidence text available
STAM2 affects STAMBPL1
| 2
| 1

sparser
"Consistent with this, coimmunoprecipitation analyses revealed that AMSH-LP could not bind to STAM1, STAM2, or Grb2, all of which contain an SH3 domain that interacts with AMSH [2,3,11] ."
| 1

sparser
"Another STAM family protein, STAM2, did not bind to AMSH-LP either, although AMSH strongly binds to STAM2 (data not shown)."
SMAD7 affects STAMBPL1
1 | 1
| 1

sparser
"Previous studies reported that although they did not investigate the DUB activity of STAMBPL1, STAMBPL1 interact with Smad2 and Smad7, followed by induction of TGF-β-mediated transcriptional activity [ xref ]."

No evidence text available
SMAD2 affects STAMBPL1
1 | 1
| 1

sparser
"Previous studies reported that although they did not investigate the DUB activity of STAMBPL1, STAMBPL1 interact with Smad2 and Smad7, followed by induction of TGF-β-mediated transcriptional activity [ xref ]."

No evidence text available
RNF32 affects STAMBPL1
2 |

No evidence text available

No evidence text available
RAB2A affects STAMBPL1
2 |

No evidence text available

No evidence text available
NFkappaB affects STAMBPL1
| 2
NFkappaB inhibits STAMBPL1.
| 1
| 1

reach
"Overexpression of wild-type STAMBPL1, but not a catalytically inactive mutant, enhanced Tax mediated NF-kappaB activation, whereas silencing of STAMBPL1 with siRNA impaired Tax activation of both the canonical and noncanonical NF-kappaB signaling pathways."
NFkappaB activates STAMBPL1.
| 1
| 1

reach
"Overexpression of wild-type STAMBPL1, but not a catalytically inactive mutant, enhanced Tax mediated NF-kappaB activation, whereas silencing of STAMBPL1 with siRNA impaired Tax activation of both the canonical and noncanonical NF-kappaB signaling pathways."
GTSE1 affects STAMBPL1
2 |

No evidence text available

No evidence text available
GAK affects STAMBPL1
2 |
2 |

No evidence text available

No evidence text available
FAS affects STAMBPL1
| 2
| 2

sparser
"STAMBPL1-FAS fusion isoform was identified in sample 1 M (metastasis cancer) and 2 M (the metastasis cancer): XM_011539985 from STAMBPL1 and XM_011539766.2 from FAS (Fig.  xref )."

sparser
"However, subsequent analysis using Taqman qPCR showed that the STAMBPL1-FAS fusion isoform can be found in all 6 cancer samples (Supplementary Fig.  xref ), implying a wider distribution of this gene fusion in colon cancers."
DUSP1 affects STAMBPL1
| 1 1
| 1 1

reach
"STAMBPL1 interacts with MKP-1 and stabilizes MKP-1 via deubiquitination."

sparser
"STAMBPL1 interacts with MKP-1 and stabilizes MKP-1 via deubiquitination."
Clathrin affects STAMBPL1
| 1 1

reach
"Both STAMBP and STAMBPL1 localize to early endosomes by binding to clathrin (31); however, STAMBPL1 fails to bind to STAM due to residue substitutions in the SBM-like motif, suggesting it may function in different signaling pathway from that of STAMBP (30) ."
| DOI

sparser
"We further show that AMSH and AMSH-LP bind to the terminal domain of clathrin heavy chain via a novel clathrin-binding site conserved between these proteins."
CLINT1 affects STAMBPL1
2 |

No evidence text available

No evidence text available
CFLAR affects BIRC5
| 2
| 2

sparser
"STAMBPL1 interacted with survivin and c-FLIP, resulted in reduction of ubiquitination."

sparser
"Thus, these data reveal that STAMBPL1 directly interacts with survivin and c-FLIP, resulting in stabilization of proteins."
BRCC3 affects STAMBPL1
| 2
BRCC3 deubiquitinates STAMBPL1.
| 1
BRCC3 deubiquitinates STAMBPL1. 1 / 1
| 1

reach
"To identify the DUB associated with NALP7, we over-expressed plasmids expressing several candidate DUBs including BRCC3, which deubiquitinates NALP3, COPS5, STAMBPL1, USP7 and the endosome associated DUBs, STAMBP and USP8."
BRCC3 binds STAMBPL1.
| 1

reach
"Thus, it is likely that BRCC36 and AMSH-LP bind K63-Ub 2 similarly.Comparison of the BRCC36 homodimer and heterodimer structures suggests an explanation for the loss of catalytic activity in the homod[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
BIRC5 affects CFLAR, and STAMBPL1
| 2
| 2

sparser
"STAMBPL1 interacted with survivin and c-FLIP, resulted in reduction of ubiquitination."

sparser
"Thus, these data reveal that STAMBPL1 directly interacts with survivin and c-FLIP, resulting in stabilization of proteins."
(+)-JQ1 compound decreases the amount of STAMBPL1. 2 / 2
2 |

No evidence text available

No evidence text available
1 |
Vincristine decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
Urethane affects STAMBPL1
1 |
Urethane decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Tunicamycin increases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Triadimefon increases the amount of STAMBPL1. 1 / 1
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No evidence text available
1 |
Topotecan decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Thapsigargin increases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Sulforaphane increases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
Sst2 affects K63
| 1
| 1

sparser
"In contrast, AMSH-LP and its yeast homolog Sst2 bind K63 diUb with K M of ~ 50 μM and k cat of ~ 1 s − 1 , substantiall[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
Rpn11 affects Ubiquitin
| 1
Ubiquitin binds STAMBPL1 and rpn11. 1 / 1
| 1

sparser
"Rpn11 and AMSH-LP bind ubiquitin in a similar orientation, but their interaction with the Ile44 hydrophobic patch is quite different."
1 |
Resveratrol increases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Propiconazole increases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Progesterone decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
Potassium chromate decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
Polyubiquitin affects STAMBPL1
| 1
STAMBPL1 binds polyubiquitin. 1 / 1
| 1

sparser
"Thus, the structure of the AMSH-LP domain bound to K63-linked polyubiquitin reveals one mode by which DUBs discriminate between polyubiquitin isoforms."
1 |

No evidence text available
1 |
Paracetamol decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Oxaliplatin decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Nickel sulfate decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Nickel atom increases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
Methyl methanesulfonate decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
Methamphetamine decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Melphalan decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Lead diacetate decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Jinfukang decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Ionomycin increases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-941 decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-885-5p decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-766-3p decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
Hsa-miR-6868-3p decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
Hsa-miR-6849-3p decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
Hsa-miR-6837-3p decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
Hsa-miR-6754-3p decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
Hsa-miR-6720-5p decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
Hsa-miR-6512-3p decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-548p decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
Hsa-miR-5197-5p decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-508-5p decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
Hsa-miR-4778-3p decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
Hsa-miR-4633-5p decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-412-3p decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-23c decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-23b-3p decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-23a-3p decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-215-5p decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-192-5p decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
Hsa-miR-130a-5p decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-1248 decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
Hsa-miR-1237-3p decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
Hsa-miR-103a-3p decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
Hexabromocyclododecane decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Formaldehyde decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Folic acid increases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Flutamide increases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Flusilazole increases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Fluoranthene increases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Fenarimol increases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
Ethyl methanesulfonate decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
Ethanol affects STAMBPL1
1 |
Ethanol increases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Entinostat decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Endosulfan increases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
Ectopic following affects STAMBPL1
| 1
Ectopic following activates STAMBPL1. 1 / 1
| 1

eidos
"A 137 number of novel host factors have been confirmed to facilitate SARS-CoV-2 pseudovirus entry ,138 151HEK293T cells , besides ACE2 and CTSL , the ectopic expression of any of the following genes could 152 effectively enable SARS-CoV-2 infection , CLEC4G , CPLX1 , LDLRAD3 , TMEM30A , and STAMBPL1 153 ( Fig. 3B ) ."
| DOI
1 |
Doxorubicin decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Dorsomorphin decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
Choline affects STAMBPL1
1 |
Choline increases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
| 1

eidos
"However , although cepharanthine reduces STAMBPL1 expression and overexpression of STAMBPL1 inhibits cepharanthine-mediated downregulation of survivin , interaction between STAMBPL1 and survivin was not investigated ."
1 |
1 |

No evidence text available
1 |
Calcitriol increases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
Butanal affects STAMBPL1
1 |
Butanal increases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |

No evidence text available
1 |
Benzo[a]pyrene increases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |

No evidence text available
Atrazine affects STAMBPL1
1 |
Atrazine decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
All-trans-retinoic acid increases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Acetamide increases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
Abrine affects STAMBPL1
1 |
Abrine increases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
ZNF106 affects STAMBPL1
1 |

No evidence text available
YPEL3 affects STAMBPL1
| 1
| 1

sparser
"These data suggest that STAMBPL1, CEP55, YPEL3 and IGFBP1 may be associated with the prognosis of patients with PAAD."
WNK1 affects STAMBPL1
1 |
1 |

No evidence text available
VTI1B affects STAMBPL1
1 |

No evidence text available
Ubiquitin affects rpn11
| 1
Ubiquitin binds STAMBPL1 and rpn11. 1 / 1
| 1

sparser
"Rpn11 and AMSH-LP bind ubiquitin in a similar orientation, but their interaction with the Ile44 hydrophobic patch is quite different."
Ubiquitin affects PTCH1
| 1

sparser
"AMSH-LP binds the distal ubiquitin via its Leu8/Ile44/Val70 hydrophobic patch conserved in NEDD8."
Ubiquitin affects BRCC36
| 1

sparser
"Thus, it is likely that BRCC36 and AMSH-LP bind K63-Ub 2 similarly."
UbV SP.1 affects STAMBPL1
| 1
UbV SP.1 inhibits STAMBPL1. 1 / 1
| 1

reach
"In addition, UbV SP.1 appeared to inhibit STAMBPL1 to some extent, whereas UbV SP.3 showed no inhibitory effect with STAMBPL1 (Fig. S2A) ."
| DOI
USP49 affects STAMBPL1
1 |

No evidence text available
UBE2N affects STAMBPL1
1 |

No evidence text available
UBD affects Phe403
| 1
UBD binds STAMBPL1 and Phe403. 1 / 1
| 1

reach
"X-ray crystal structures of the DUB domains of both AMSH-LP and Sst2 bound to diubiquitin shows Phe403 collapsed onto the Lys63 side chain of the proximal ubiquitin; however, the flap residues appear to retain their mobility even in presence of bound substrate or product (indicated by relatively weak electron density enveloping these residues and higher B-factors than internal residues)."
UBC affects STAMBPL1
1 |
1 |

No evidence text available
Tobacco Smoke Pollution decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
TRIM27 affects STAMBPL1
1 |

No evidence text available
TCF4 affects STAMBPL1
1 |
1 |

No evidence text available
STX8 affects STAMBPL1
1 |
1 |

No evidence text available

reach
"As a result, viral transcription and replication are greatly suppressed by either LEF1 or STAMBPL1, resulting in selective viral replication in LEF1 and STAMPBPL1 low expressing cells."
STAMBPL1 affects survivin c-FLIP protein
| 1
STAMBPL1 activates survivin c-FLIP protein. 1 / 1
| 1

eidos
"Knockdown of STAMBPL1 reduced survivin and c-FLIP protein levels , while overexpression of STAMBPL1 inhibited honokinol-induced survivin and c-FLIP degradation ."
STAMBPL1 affects rpn11
| 1
Ubiquitin binds STAMBPL1 and rpn11. 1 / 1
| 1

sparser
"Rpn11 and AMSH-LP bind ubiquitin in a similar orientation, but their interaction with the Ile44 hydrophobic patch is quite different."
STAMBPL1 affects polyubiquitin
| 1
STAMBPL1 binds polyubiquitin. 1 / 1
| 1

sparser
"Thus, the structure of the AMSH-LP domain bound to K63-linked polyubiquitin reveals one mode by which DUBs discriminate between polyubiquitin isoforms."
| 1
STAMBPL1 increases the amount of messenger RNA. 1 / 1
| 1

reach
"qPCR results revealed, beyond the knockdown efficiency, that depletion of STAMBPL1 causes an elevation of CDH1 and a reduction of VIM messenger RNA (mRNA) levels (Fig. 2b)."

reach
"STAMBPL1 expression contributes to EMT."
STAMBPL1 affects cepharanthine-mediated survivin
| 1
STAMBPL1 activates cepharanthine-mediated survivin. 1 / 1
| 1

eidos
"However , although cepharanthine reduces STAMBPL1 expression and overexpression of STAMBPL1 inhibits cepharanthine-mediated downregulation of survivin , interaction between STAMBPL1 and survivin was not investigated ."
STAMBPL1 affects breast cancer cell resistance cisplatin
| 1
STAMBPL1 activates breast cancer cell resistance cisplatin. 1 / 1
| 1

eidos
"STAMBPL1 promotes breast cancer cell resistance to cisplatin partially by stabilizing MKP-1 expression ."
STAMBPL1 affects ZNF106
1 |

No evidence text available
STAMBPL1 affects YPEL3
| 1
| 1

sparser
"These data suggest that STAMBPL1, CEP55, YPEL3 and IGFBP1 may be associated with the prognosis of patients with PAAD."
STAMBPL1 affects XIAP
| 1
| 1

reach
"Taken together, these studies show that STAMBPL1 depletion induces apoptosis by promoting XIAP lysosomal degradation, and suggest that targeting deubiquitinase STAMBPL1 might offer promising therapeutic strategy for prostate cancer."
STAMBPL1 affects WNK1
1 |
1 |

No evidence text available
STAMBPL1 affects VTI1B
1 |

No evidence text available
STAMBPL1 affects VIM
| 1
STAMBPL1 increases the amount of VIM. 1 / 1
| 1

reach
"qPCR results revealed, beyond the knockdown efficiency, that depletion of STAMBPL1 causes an elevation of CDH1 and a reduction of VIM messenger RNA (mRNA) levels (Fig. 2b)."
STAMBPL1 affects Ubiquitin, and rpn11
| 1
Ubiquitin binds STAMBPL1 and rpn11. 1 / 1
| 1

sparser
"Rpn11 and AMSH-LP bind ubiquitin in a similar orientation, but their interaction with the Ile44 hydrophobic patch is quite different."
STAMBPL1 affects UbVSP.1
| 1
STAMBPL1 binds UbVSP.1. 1 / 1
| 1

reach
"A strong hydrogen bond network is then formed between the Arg72 guanidinium and the backbone carbonyl group of Glu326 in ins-1 and between the amide group of Gln49 of UbVSP.1 with the backbone carbonyl and amide of Val328 and Glu326, thus stabilizing the interaction between the STAMBPL1 and UbVSP.1 (Fig. 2G)."
STAMBPL1 affects USP49
1 |

No evidence text available
STAMBPL1 affects UBE2N
1 |

No evidence text available
STAMBPL1 affects UBC
1 |
1 |

No evidence text available
STAMBPL1 affects TRIM27
1 |

No evidence text available
STAMBPL1 affects TP53
| 1
STAMBPL1 activates mutated TP53. 1 / 1
| 1

reach
"Concomitantly, we observed that STAMBPL1 expression was elevated in cells with mutant p53-elicited EMT (Fig. 6c)."
STAMBPL1 affects TGFß
| 1
STAMBPL1 activates TGFß. 1 / 1
| 1

reach
"Leukaemia (2) AMSH-LP Potentiates TGFß signaling through interaction with inihibitory I-SMADs (62) None reportedKidney (2), liver, brain, HNSCC.Brain, testicular, leukaemia, brain."
STAMBPL1 affects TGFB
| 1
STAMBPL1 activates TGFB. 1 / 1
| 1

reach
"Finally, AMSH-LP and UCHL5 promote TGF-beta responses through their interaction with inhibitory I-SMADs [XREF_BIBR, XREF_BIBR]."
STAMBPL1 affects TCF4
1 |
1 |

No evidence text available
STAMBPL1 affects STX8
1 |
1 |

No evidence text available
STAMBPL1 affects SP1
| 1
| 1

sparser
"While our study highlights and connect three key signalling pathways: mutant p53, EMT and DUBs, showing that STAMBPL1 is transcriptionally elevated in mutant p53-expressing cells, STAMBPL1 seems not to be under a direct regulation by p53 R175H . However, out of the known TFs that help recruit mutant p53 to the chromatin to upregulate genes, xref we found that E2F2, E2F6, MAFF and SP1 can bind to the core promoter region of STAMBPL1 by their motif search using Eukaryotic promoter database."
STAMBPL1 affects SNRPA1
1 |

No evidence text available
STAMBPL1 affects SMAP2
1 |

No evidence text available
STAMBPL1 affects SIPA1L1
1 |

No evidence text available
STAMBPL1 affects SHBG
| 1
| 1

sparser
"Hameed et al. developed a zinc chelating ABP that forms a tight complex with STAMBP and STAMBPL1 and inhibits the activity of the proteasomal DUB Rpn11 (PSMD14 in humans)."
STAMBPL1 affects SESN2
| 1

sparser
"Lastly, a cell-permeable peptide that blocks the STAMBPL1-Sestrin2 interaction inhibits mTORC1 and provides a potential option for cancer therapy."
STAMBPL1 affects RPN11
| 1
| 1

reach
"In fact, whereas the Ins-2 loop of AMSH-LP contacts the proximal ubiquitin, restricting linkage specificity [44], in Rpn11, it anchors the enzyme to the proteasome [45,66]."
STAMBPL1 affects REPS1
1 |

No evidence text available
STAMBPL1 affects Phe403
| 1
UBD binds STAMBPL1 and Phe403. 1 / 1
| 1

reach
"X-ray crystal structures of the DUB domains of both AMSH-LP and Sst2 bound to diubiquitin shows Phe403 collapsed onto the Lys63 side chain of the proximal ubiquitin; however, the flap residues appear to retain their mobility even in presence of bound substrate or product (indicated by relatively weak electron density enveloping these residues and higher B-factors than internal residues)."
STAMBPL1 affects PTCH1
| 1

sparser
"AMSH-LP binds the distal ubiquitin via its Leu8/Ile44/Val70 hydrophobic patch conserved in NEDD8."
STAMBPL1 affects PSEN1
1 |

No evidence text available
STAMBPL1 affects PNMA1
1 |

No evidence text available
STAMBPL1 affects PIK3C2A
1 |

No evidence text available
STAMBPL1 affects PICALM
1 |

No evidence text available
STAMBPL1 affects OTUB1
1 |

No evidence text available
| 1
| 1

reach
"Knockout of STAMBPL1 or correction of the heterozygous STAMBPL1 mutation in a human colon cancer cell line suppresses xenograft tumor growth."
STAMBPL1 affects NUMB
1 |
1 |

No evidence text available
STAMBPL1 affects MYC
| 1
STAMBPL1 decreases the amount of MYC. 1 / 1
| 1

reach
"It is of great interest that the C-terminal-half-deleted mutants of AMSH and AMSH-LP, which lack the JAMM motifs, are unable to induce the IL-2-mediated c- myc expression."
STAMBPL1 affects MAST1
1 |

No evidence text available
STAMBPL1 affects MAGEA6
1 |

No evidence text available
STAMBPL1 affects MAFF
| 1
| 1

sparser
"While our study highlights and connect three key signalling pathways: mutant p53, EMT and DUBs, showing that STAMBPL1 is transcriptionally elevated in mutant p53-expressing cells, STAMBPL1 seems not to be under a direct regulation by p53 R175H . However, out of the known TFs that help recruit mutant p53 to the chromatin to upregulate genes, xref we found that E2F2, E2F6, MAFF and SP1 can bind to the core promoter region of STAMBPL1 by their motif search using Eukaryotic promoter database."
STAMBPL1 affects LAX1
1 |
1 |

No evidence text available
STAMBPL1 affects JAB
| 1
| 1

sparser
"1 / STAMBPL1 JAMM complex at 2.0 Å resolution (PDB:7L97, Fig. 2B and Table 1 ) in space group C 2 ."
STAMBPL1 affects INCA1
1 |

No evidence text available
STAMBPL1 affects IKZF3
1 |

No evidence text available
STAMBPL1 affects IGFBP1
| 1
| 1

sparser
"These data suggest that STAMBPL1, CEP55, YPEL3 and IGFBP1 may be associated with the prognosis of patients with PAAD."
STAMBPL1 affects HMX3
1 |
1 |

No evidence text available
STAMBPL1 affects HIP1R
1 |

No evidence text available
STAMBPL1 affects GRB2
| 1
| 1

sparser
"Consistent with this, coimmunoprecipitation analyses revealed that AMSH-LP could not bind to STAM1, STAM2, or Grb2, all of which contain an SH3 domain that interacts with AMSH [2,3,11] ."
STAMBPL1 affects GPRIN1
1 |

No evidence text available
STAMBPL1 affects GOLGA2
1 |

No evidence text available
STAMBPL1 affects GNPTAB
1 |

No evidence text available
STAMBPL1 affects EPS15
1 |

No evidence text available
STAMBPL1 affects ECSIT
1 |

No evidence text available
STAMBPL1 affects E7
1 |
1 |

No evidence text available
STAMBPL1 affects E2F6
| 1
| 1

sparser
"While our study highlights and connect three key signalling pathways: mutant p53, EMT and DUBs, showing that STAMBPL1 is transcriptionally elevated in mutant p53-expressing cells, STAMBPL1 seems not to be under a direct regulation by p53 R175H . However, out of the known TFs that help recruit mutant p53 to the chromatin to upregulate genes, xref we found that E2F2, E2F6, MAFF and SP1 can bind to the core promoter region of STAMBPL1 by their motif search using Eukaryotic promoter database."
STAMBPL1 affects DUB domain
| 1
STAMBPL1 binds DUB domain and K63-Ub 2. 1 / 1
| 1

reach
"The overall three-dimensional fold of Sst2 Delta220 -K63-Ub 2 is highly similar to the structure of the DUB domain of AMSH-LP bound to K63-Ub 2 (PDB entry 2ZNV) with an rmsd of 1.19 A of Calpha atoms over 266 residues from both Sst2 and K63-Ub 2."
| 1

eidos
"In addition , STAMBPL1 deubiquitinylates the anti-apoptotic protein Survivin and thus ameliorates cell survival ."
STAMBPL1 affects CNTN2
| 1
STAMBPL1 leads to the deubiquitination of CNTN2. 1 / 1
| 1

reach
"The deubiquitination of Tax-1 can be also mediated by STAM binding protein like 1 (STAMBPL1), which was identified in an RNA interference screen XREF_BIBR."
STAMBPL1 affects CLTCL1
1 |

No evidence text available
STAMBPL1 affects CEP72
1 |

No evidence text available
STAMBPL1 affects CEP55
| 1
| 1

sparser
"These data suggest that STAMBPL1, CEP55, YPEL3 and IGFBP1 may be associated with the prognosis of patients with PAAD."
STAMBPL1 affects CDH1
| 1
STAMBPL1 increases the amount of CDH1. 1 / 1
| 1

reach
"These analyses showed that the KO of STAMBPL1 caused a significant restoration in the expression of E-cadherin, both transcriptionally and at protein levels, and a significant vimentin reduction."
STAMBPL1 affects CDC37
1 |

No evidence text available
STAMBPL1 affects CC2D2A
1 |

No evidence text available
STAMBPL1 affects CAPZA2
1 |

No evidence text available
STAMBPL1 affects BRCC36
| 1

sparser
"Thus, it is likely that BRCC36 and AMSH-LP bind K63-Ub 2 similarly."
STAMBPL1 affects BRCC3
| 1

reach
"Thus, it is likely that BRCC36 and AMSH-LP bind K63-Ub 2 similarly.Comparison of the BRCC36 homodimer and heterodimer structures suggests an explanation for the loss of catalytic activity in the homod[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
STAMBPL1 affects BMP2K
1 |

No evidence text available
STAMBPL1 affects AP1B1
1 |

No evidence text available
STAMBPL1 affects A2M
1 |
1 |

No evidence text available
STAMBP affects SHBG
| 1
| 1

sparser
"Hameed et al. developed a zinc chelating ABP that forms a tight complex with STAMBP and STAMBPL1 and inhibits the activity of the proteasomal DUB Rpn11 (PSMD14 in humans)."
STAMBP affects Clathrin
| 1

sparser
"We further show that AMSH and AMSH-LP bind to the terminal domain of clathrin heavy chain via a novel clathrin-binding site conserved between these proteins."
STAM2 affects GRB2
| 1
| 1

sparser
"Consistent with this, coimmunoprecipitation analyses revealed that AMSH-LP could not bind to STAM1, STAM2, or Grb2, all of which contain an SH3 domain that interacts with AMSH [2,3,11] ."
STAM affects STAM2, and STAMBPL1
| 1
| 1

sparser
"Another STAM family protein, STAM2, did not bind to AMSH-LP either, although AMSH strongly binds to STAM2 (data not shown)."
STAM affects GRB2
| 1
| 1

sparser
"Consistent with this, coimmunoprecipitation analyses revealed that AMSH-LP could not bind to STAM1, STAM2, or Grb2, all of which contain an SH3 domain that interacts with AMSH [2,3,11] ."
SP1 affects STAMBPL1
| 1
| 1

sparser
"While our study highlights and connect three key signalling pathways: mutant p53, EMT and DUBs, showing that STAMBPL1 is transcriptionally elevated in mutant p53-expressing cells, STAMBPL1 seems not to be under a direct regulation by p53 R175H . However, out of the known TFs that help recruit mutant p53 to the chromatin to upregulate genes, xref we found that E2F2, E2F6, MAFF and SP1 can bind to the core promoter region of STAMBPL1 by their motif search using Eukaryotic promoter database."
SNRPA1 affects STAMBPL1
1 |

No evidence text available
SNP rs2862833 affects STAMBPL1
| 1
SNP rs2862833 increases the amount of STAMBPL1. 1 / 1
| 1

reach
"The protective SNP rs2862833, a downstream variant of the FAS gene, increased the expression of FAS (Z-score 10.8, P = 3.51 x10 -27) and the STAMBPL1 and ACTA2 locus (Z-score 38.25, P = 9.81 x10 -198)."
SMURF2 affects STAMBPL1
1 |
SMURF2 ubiquitinates STAMBPL1. 1 / 1
1 |
SMAP2 affects STAMBPL1
1 |

No evidence text available
SMAD7 affects SMAD2
| 1
| 1

sparser
"Previous studies reported that although they did not investigate the DUB activity of STAMBPL1, STAMBPL1 interact with Smad2 and Smad7, followed by induction of TGF-β-mediated transcriptional activity [ xref ]."
SIPA1L1 affects STAMBPL1
1 |

No evidence text available
SHBG affects STAMBPL1
| 1
| 1

sparser
"Hameed et al. developed a zinc chelating ABP that forms a tight complex with STAMBP and STAMBPL1 and inhibits the activity of the proteasomal DUB Rpn11 (PSMD14 in humans)."
SESN2 affects STAMBPL1
| 1

sparser
"Lastly, a cell-permeable peptide that blocks the STAMBPL1-Sestrin2 interaction inhibits mTORC1 and provides a potential option for cancer therapy."
REPS1 affects STAMBPL1
1 |

No evidence text available
Phe403 affects UBD
| 1
UBD binds STAMBPL1 and Phe403. 1 / 1
| 1

reach
"X-ray crystal structures of the DUB domains of both AMSH-LP and Sst2 bound to diubiquitin shows Phe403 collapsed onto the Lys63 side chain of the proximal ubiquitin; however, the flap residues appear to retain their mobility even in presence of bound substrate or product (indicated by relatively weak electron density enveloping these residues and higher B-factors than internal residues)."
PTCH1 affects Ubiquitin
| 1

sparser
"AMSH-LP binds the distal ubiquitin via its Leu8/Ile44/Val70 hydrophobic patch conserved in NEDD8."
PSEN1 affects STAMBPL1
1 |

No evidence text available
PNMA1 affects STAMBPL1
1 |

No evidence text available
PIK3C2A affects STAMBPL1
1 |

No evidence text available
PICALM affects STAMBPL1
1 |

No evidence text available
OTUB1 affects STAMBPL1
1 |

No evidence text available
NUMB affects STAMBPL1
1 |
1 |

No evidence text available
N-nitrosodiethylamine increases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
MYC affects STAMBPL1
| 1
MYC activates mutated STAMBPL1. 1 / 1
| 1

reach
"Second, defective intracellular trafficking and localization, originating from D406G germline mutation of STAMBPL1 and enhanced by MYC network activation, inhibit cell polarity establishment and cell differentiation, preventing cell cycle exit."
MAST1 affects STAMBPL1
1 |

No evidence text available
MAGEA6 affects STAMBPL1
1 |

No evidence text available
MAFF affects STAMBPL1
| 1
| 1

sparser
"While our study highlights and connect three key signalling pathways: mutant p53, EMT and DUBs, showing that STAMBPL1 is transcriptionally elevated in mutant p53-expressing cells, STAMBPL1 seems not to be under a direct regulation by p53 R175H . However, out of the known TFs that help recruit mutant p53 to the chromatin to upregulate genes, xref we found that E2F2, E2F6, MAFF and SP1 can bind to the core promoter region of STAMBPL1 by their motif search using Eukaryotic promoter database."
LAX1 affects STAMBPL1
1 |
1 |

No evidence text available
1 |
L-methionine increases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
K63-Ub 2 affects DUB domain
| 1
STAMBPL1 binds DUB domain and K63-Ub 2. 1 / 1
| 1

reach
"The overall three-dimensional fold of Sst2 Delta220 -K63-Ub 2 is highly similar to the structure of the DUB domain of AMSH-LP bound to K63-Ub 2 (PDB entry 2ZNV) with an rmsd of 1.19 A of Calpha atoms over 266 residues from both Sst2 and K63-Ub 2."
K63 affects sst2
| 1
| 1

sparser
"In contrast, AMSH-LP and its yeast homolog Sst2 bind K63 diUb with K M of ~ 50 μM and k cat of ~ 1 s − 1 , substantiall[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
K63 affects BRCC36
| 1

sparser
"Thus, it is likely that BRCC36 and AMSH-LP bind K63-Ub 2 similarly."
JAB affects STAMBPL1
| 1
| 1

sparser
"1 / STAMBPL1 JAMM complex at 2.0 Å resolution (PDB:7L97, Fig. 2B and Table 1 ) in space group C 2 ."
INCA1 affects STAMBPL1
1 |

No evidence text available
IKZF3 affects STAMBPL1
1 |

No evidence text available
IGFBP1 affects YPEL3
| 1
| 1

sparser
"These data suggest that STAMBPL1, CEP55, YPEL3 and IGFBP1 may be associated with the prognosis of patients with PAAD."
HMX3 affects STAMBPL1
1 |
1 |

No evidence text available
HIP1R affects STAMBPL1
1 |

No evidence text available
GSK3 affects STAMBPL1
| 1
GSK3 decreases the amount of STAMBPL1. 1 / 1
| 1

reach
"Consistent with the effect of GSK-3 inhibition to stimulate the transcription of Snail, in this study, we show that GSK-3α/β inhibition can induce a significant STAMBPL1 expression in all cell lines tested, signifying that this stimulation is able to trigger similar STAMBPL1 molecular response in several cell and cancer types and suggest that GSK-3α/β inhibition may converge upon common signalling element in multiple carcinomas to activate STAMBPL1."
GRB2 affects STAMBPL1
| 1
| 1

sparser
"Consistent with this, coimmunoprecipitation analyses revealed that AMSH-LP could not bind to STAM1, STAM2, or Grb2, all of which contain an SH3 domain that interacts with AMSH [2,3,11] ."
GPRIN1 affects STAMBPL1
1 |

No evidence text available
GOLGA2 affects STAMBPL1
1 |

No evidence text available
GNPTAB affects STAMBPL1
1 |

No evidence text available
FOXO1 affects STAMBPL1
1 |
Transcriptionally active FOXO1 increases the amount of STAMBPL1. 1 / 1
1 |

"Supplemental Table S1. Transcripts found in Class I [activated by FKHR]"
EPS15 affects STAMBPL1
1 |

No evidence text available
ECSIT affects STAMBPL1
1 |

No evidence text available
E7 affects STAMBPL1
1 |
1 |

No evidence text available
E2F6 affects STAMBPL1
| 1
| 1

sparser
"While our study highlights and connect three key signalling pathways: mutant p53, EMT and DUBs, showing that STAMBPL1 is transcriptionally elevated in mutant p53-expressing cells, STAMBPL1 seems not to be under a direct regulation by p53 R175H . However, out of the known TFs that help recruit mutant p53 to the chromatin to upregulate genes, xref we found that E2F2, E2F6, MAFF and SP1 can bind to the core promoter region of STAMBPL1 by their motif search using Eukaryotic promoter database."
DUB domain affects STAMBPL1
| 1
STAMBPL1 binds DUB domain and K63-Ub 2. 1 / 1
| 1

reach
"The overall three-dimensional fold of Sst2 Delta220 -K63-Ub 2 is highly similar to the structure of the DUB domain of AMSH-LP bound to K63-Ub 2 (PDB entry 2ZNV) with an rmsd of 1.19 A of Calpha atoms over 266 residues from both Sst2 and K63-Ub 2."
1 |
Cuprizone decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
Clathrin affects STAMBP
| 1

sparser
"We further show that AMSH and AMSH-LP bind to the terminal domain of clathrin heavy chain via a novel clathrin-binding site conserved between these proteins."
CLTCL1 affects STAMBPL1
1 |

No evidence text available
CLTC affects STAMBP
| 1

sparser
"We further show that AMSH and AMSH-LP bind to the terminal domain of clathrin heavy chain via a novel clathrin-binding site conserved between these proteins."
CEP72 affects STAMBPL1
1 |

No evidence text available
CEP55 affects YPEL3
| 1
| 1

sparser
"These data suggest that STAMBPL1, CEP55, YPEL3 and IGFBP1 may be associated with the prognosis of patients with PAAD."
CDC37 affects STAMBPL1
1 |

No evidence text available
CC2D2A affects STAMBPL1
1 |

No evidence text available
CAPZA2 affects STAMBPL1
1 |

No evidence text available
BRCC36 affects Ubiquitin
| 1

sparser
"Thus, it is likely that BRCC36 and AMSH-LP bind K63-Ub 2 similarly."
BMP2K affects STAMBPL1
1 |

No evidence text available
1 |
Aroclor 1254 decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
Air Pollutants increases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |
AZM551248 increases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
AP1B1 affects STAMBPL1
1 |

No evidence text available
A2M affects STAMBPL1
1 |
1 |

No evidence text available
1 |

No evidence text available
2-hydroxypropanoic acid decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
2-butoxyethanol decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available

No evidence text available
17beta-estradiol decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1-methylanthracene increases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1,1-dichloroethene increases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available
1 |

No evidence text available
(-)-demecolcine decreases the amount of STAMBPL1. 1 / 1
1 |

No evidence text available