IndraLab

Statements


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sparser
"The results revealed that many unique pathways are enriched in the communications involving the KYNU(+) macrophage subpopulation, such as THBS (THBS1-CD47, THBS1-SDC1, THBS1-SDC4), TENASCIN (TNXB-SDC4), THY1 (THY1-(ITGAX+ITGB2)), GALECTIN (LGALS9-HAVCR2), ICAM (ICAM1-(ITGAX+ITGB2)), ANNEXIN (ANXA1-FPR1), and COMPLEMENT (C3-(ITGAX+ITGB2))."

sparser
"Outeiro-Bernstein et al. discovered that the binding of THBS1 to SDC4 inhibited the apoptosis of vascular endothelial cells and maintained their adhesion function [ xref ]."

reach
"Ferrari do Outeiro-Bernstein et al. discovered that the binding of THBS1 to SDC4 inhibited apoptosis of vascular endothelial cells and maintained their adhesion function [70]."

sparser
"Endothelial cells demonstrated profibrotic signaling via THBS1-SDC4, PDGFB-PDGFRα, and JAG1-NOTCH3 signaling targeting epithelial cells, fibroblasts, and smooth muscle cells, respectively."

sparser
"Further ligand-receptor analysis revealed that immune signal axis such as Tnf−Tnfrsf1a, Itga4-Vcam1, Thbs1Sdc4, Cxcl1−Cxcr2 might participate in the intercellular crosstalk between injured PTCs, macrophage, and monocytes ( xref – xref and xref )."

reach
"There are indications that binding of TSP-1 to syndecan-4 proteoglycan mediates tubulogenesis and their protection from apoptosis [XREF_BIBR]."

reach
"Outeiro-Bernstein et al. discovered that the binding of THBS1 to SDC4 inhibited the apoptosis of vascular endothelial cells and maintained their adhesion function [51]."

sparser
"Additional novel L–R gene pairs FGF-NRP1, THBS1-SDC4 , and ANXA2-ROBO4 are non- VEGF L–R pairs, identified within the angiogenic regulation group and previously shown to regulate and maintain the microvasculature within glomeruli ( xref – xref )."

sparser
"The chord diagram illustrates THBS1-SDC4 signaling among endothelial cells, epithelial cells, fibroblasts, and smooth muscle cells (Fig.  xref A)."

sparser
"A high degree of interaction between THBS1-SDC4 and CNN1-SDC4 was observed, indicating that fibroblasts are the main sending cells affecting changes in the epithelial cell pathway ( xref )."

reach
"In saline mice, we discovered major interactions between Thbs1 (thrombospondin1) and Sdc1 (Syndecan-1), Sdc4 (Syndecan-4), and Cd36 (Figure 7E)."

sparser
"Analysis of outgoing FN1, THBS, and SPP signaling from Mono&Maph to vascular cells revealed several ligand-receptor pairs with high communication probabilities, including Fn1-Sdc4 and Fn1- (Itga5 + Itgb1), Thbs1-Sdc4, and Spp1- (Itga5 + Itgb1) respectively (Fig.  xref )."

sparser
"Interaction between thrombospondin 1 (THBS1) and syndecan 4 (SDC4) was predicted to mediate the interaction of basal, neuroendocrine, and tuft cells with UCT cells ( xref )."

sparser
"Among the ligand-receptor pairs of THBS signaling, the Thbs1-Sdc4 ligand-receptor pair showed the highest communication probability, especially in Maph-2 to SMC-2 communication ( xref )."

sparser
"Examination of each ligand-receptor pair in THBS signaling revealed that Thbs1-Sdc4 signaling was the dominant pathway from macrophages to SMCs, especially from Maph-1 to SMC-2 ( xref )."

sparser
"Thbs1-Sdc4 and Thbs1-Cd47 were responsible for communication from SMCs to macrophages, and from Fib-2 to fibroblasts, SMCs, and macrophages ( xref )."

sparser
"By analyzing each ligand-receptor pair of THBS signaling between macrophages and SMCs, we identified that Thbs1-Sdc4 was the most elevated pathway sent from Maph-2 to SMCs (especially synthetic SMC-2), and that Thbs1-Cd47 signaling sent from SMC-2 to macrophages (especially pro-inflammatory Maph-2) was decreased by AAA."

sparser
"Of note, Thbs1-Sdc4 signaling was increased the most at Day 7, and slightly decreased at Day 14."

sparser
"Thbs1-Sdc4 and Thbs1-Cd47 were the major signaling pathways sent from SMCs (SMC-3) to macrophages."

sparser
"Although UCT cells demonstrated low levels of THBS1 expression, the reciprocal interaction of THBS1 and SDC4 may explain the high interaction probability of this pair within the UCT cells."

reach
"However, by binding to syndecan-4, TSP-1 can also exert pro angiogenic effects, protecting ECs from apoptosis and stimulating tubulogenesis [XREF_BIBR]."

sparser
"Ligand-receptor pairs such as ADGRE5-CD55, CD99-CD99, and THBS1-SDC4 were shown to increase in incoming signaling from monocytes in the non-survivor group in both methods, while HLA-DMB-CD4, ANXA1-FPR2, and FCER2A-(ITGAX+ITGB2) were shown to decrease in incoming signaling from monocytes in the non-surviving sepsis group in both methods."

sparser
"We performed a clinical relevance analysis on the representative ligand-receptor pairs in the PAAD data from TCGA and found that the ligand-receptor pairs represented by ADGRE5-CD55, AGRN-DAG1, EFNA1-EPHA2, COL1A1-CD44, THBS1-SDC4, and LGALS9-CD44 were expressed at a higher level in tumor tissues compared with normal tissues, and the high expression of ligand-receptor pairs was associated with poor prognosis ( xref B and xref )."

sparser
"In state 1, neutrophils engaged macrophages predominantly via Thbs1‐Cd36, Thbs1‐Cd47, and Thbs1Sdc4 axes, which are closely associated with immune suppression and macrophage polarization (Figure xref , Supporting Information)."

sparser
"When macrophages acted as signal senders, the THBS (THBS1-CD47, THBS1-SDC1, and THBS1-SDC4) pathway was enriched in the cell interactions of the KYNU(+) macrophage subpopulation."

sparser
"There are indications that binding of TSP-1 to syndecan-4 proteoglycan mediates tubulogenesis and their protection from apoptosis [ xref ]."