IndraLab

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| 19

sparser
"The results of Co-IP and western blot revealed that there was an exogenous specifical interaction between Flag-USP8 and His-PD-L1 (Fig. xref )."

sparser
"A FANCD2 interaction with the highly expressed Flag-USP8 or with the lower-expressed VDUI could not be detected, indicating that the observed USP1/FANCD2 interaction is specific ( Figure 4C , middle a[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Exogenous in vivo ubiquitination assay revealed that the polyubiquitination level of His-PD-L1 was obviously decreased in Flag-USP8 transduced HEK-293T cells (Fig. xref )."

sparser
"Besides, we mutated K6, K11, K27, K29, K33, K48, K63 lysine residues on the ubiquitin to arginine (K6R, K11R, K27R, K29R, K33R, K48R, K63R) and co-transfected His-PD-L1, Flag-USP8, and HA-Ub (including wide type and mutated type) into HEK-293T cells."

sparser
"To validate this notion, we stably transfected Flag-USP8 into UROtsa( SNHG1 ), while shRNAs specifically targeting USP8 (shUSP8#1 and shUSP8#2) were stably introduced into U5637(sh SNHG1 #1)."

sparser
"Our data demonstrated that ectopic expression of Flag-USP8 restored PTEN levels in UROtsa( SNHG1 ) cells, while USP8 knockdown attenuated PTEN levels in U5637(sh SNHG1 #1) cells (Fig.  xref C and D)."

sparser
"As shown in Fig.  xref I, PTEN was presented in the immune-complex pulled down of Flag-USP8 using anti-USP8 antibodies, strongly indicating the interaction USP8 enzyme with PTEN protein."

sparser
"Flag-USP8 interacted with HA-TAB2 ( xref G, lane 4) or Myc-TAK1 ( xref H, lane 4)."

sparser
"The ubiquitination of TAB2 and TAK1 was markedly attenuated in the presence of Myc-USP8 or Flag-USP8 in a dose-dependent manner ( xref I, lane 4, 6 ; xref J, lane 4, 6 ), as compared with that in the absence of Myc-USP8 or Flag-USP8 ( xref I, lane 3; xref J, lane 3)."

sparser
"Then, to verify the results of proteomics and ubiquitinome, we co-transfected Flag-USP8 and Myc-NBR1 into HEK-293T cells."

sparser
"Flag-USP8 interacted with Myc-BECN1 ( xref A, lane 4)."

sparser
"Moreover, Myc-BECN1 was ubiquitinated in the absence of Flag-USP8, whereas significant deubiquitination of Myc-BECN1 could observed in the presence of Flag-USP8 in a dose-dependent manner ( xref B, lane 4–6 vs. lane 3), indicating that USP8 induces the de-ubiquitination of BECN1."

sparser
"The results of Co-IP and western blot revealed that there was an exogenous specifical interaction between Flag-USP8 and Myc-NBR1 (Fig. xref )."

sparser
"In addition, Flag-USP8 interacted with Myc-p62 ( xref D, lane 4)."

sparser
"Myc-p62 was ubiquitinated in the absence of Flag-USP8 ( xref E, lane 3), whereas marked deubiquitination could be seen in the presence of Flag-USP8 in a dose-dependent manner ( xref E, lane 4–6 vs. lane 3), indicating that USP8 induces the deubiquitination of p62."

sparser
"Exogenous in vivo ubiquitination assay revealed that the polyubiquitination level of Myc-NBR1 was markedly decreased in Flag-USP8 transduced HEK-293T cells (Fig. xref )."

sparser
"To identify which lysine residues of ubiquitin are involved in USP8 de-ubiquitination process of NBR1, we mutated K6, K11, K27, K29, K33, K48, K63 lysine residues on the ubiquitin to arginine (K6R, K11R, K27R, K29R, K33R, K48R, K63R) and co-transfected Myc-NBR1, Flag-USP8, and HA-Ub (including wide type and mutated type) into HEK-293T cells."

sparser
"To identify whether K767 (Lys-767) and K887 (Lys-887) lysine sites on the NBR1 identified by ubiquitinome are involved in USP8-mediated de-ubiquitination process, we mutated K767 and K887 lysine to arginine on the NBR1 and co-transfected Myc-NBR1 (including wide type and K767R-mutation and K887R-mutation), Flag-USP8, and HA-Ub into HEK-293T cells."

sparser
"To address this problem, we co-transfected Flag-USP8 and His-PD-L1 into HEK-293T cells."