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"Furthermore, the genetic studies have helped to separate different entities, like BAP1-inactivated melanocytic tumors, which were initially considered a subgroup of ST since their histologic features overlap with STUMP ."

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"Tumor suppressors such as p53, BRCA1-associated protein 1 (BAP1), and Kelch-like ECH-associated protein 1 (KEAP1) have been shown to exert their tumor-suppressive functions via inducing ferroptosis.P53 is regarded as the most critical barrier for cancer development by its cell-cycle surveillance function."

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"One explanation for the limited palette of tumors promoted by BAP1 loss is that it activates a specific apoptotic program in other cell backgrounds (18)."

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"BAP1-inactivated melanocytoma (BIM) is a novel subgroup of melanocytic neoplasm listed in the 5th edition of WHO classification of skin tumor."

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"BAP1 inhibits tumor development, in part, via SLC7A11 and ferroptosis [48]."

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"Moreover, various tumor suppressors, such as p53 and BRCA1-associated protein 1 (BAP1), have been discovered to deter cancer progression by obstructing ferroptosis [9]."

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"BAP1-inaktivierter melanozytärer Tumor: ein Fallbericht: BAP1 inactivated melanocytic tumor: a case report."

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"A deterministic role for BAP1 has been shown in mice, where Bap1 loss induces more proliferative, higher-grade tumors (Gu et al., 2017)."

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"[[Translated article]]BAP1-inactivated Melanocytic Tumor: Dermoscopic Features to Aid Diagnosis."

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"Various tumor proteins, tumor suppressors like p53 and BRCA1-associated protein 1 (BAP1), and alterations in oncogenic signaling pathways within cancer cells may act as predictive biomarkers for the response to therapies that induce ferroptosis."

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"Intricately connected to internal environmental homeostasis, ferroptosis partakes in diverse tumor progression stages and activates various tumor suppressors, such as p53 and BRCA1-associated protein 1 (BAP1) (Jiang et al., 2015; Zhang et al., 2018; Chen et al., 2021; Zhao, Yang & Yang, 2022)."

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"In vivo results using a chicken embryo choriollantoic membrane (CAM) assay showed that BaP1 inhibits tumor growth, angiogenesis, and tumor proliferation."

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"11.1 BIMT (BAP1-Inactivated Melanocytic Tumor)."

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"A number of tumor suppressors such as p53 and BRCA1-associated protein 1 (BAP1) participate in the cell ferroptosis [ 34 ]."

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"BaP1 Reduces Tumor Growth, Angiogenesis, and Tumor Proliferation."

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"From the skin perspective, inactivation of this gene may predispose an individual to BAP1-inactivated melanocytic tumors, formerly called atypical Spitz tumors, and a subsequent diagnosis of BAP1 TPDS (Masoomian et al., 2018)."

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"Thus, conversely, deletion of the BAP1 gene leads to blocked execution of apoptosis and promotes malignant tumor survival, which may be an important reason for the high incidence of cancers in BAP1 +/[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

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"Furthermore, our in vivo results, using CAM assay, sustained the anticancer activity of BaP1, as it was found that BaP1 inhibits tumor growth, angiogenesis and tumor proliferation, relevant hallmarks of cancer."

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"Secondly, BAP1-mutated patients have been reported to develop BIMTs (multiple BAP1-inactivated melanocytic tumors), also known as BAP1-inactivated melanocytic tumors, which are multiple, skin-colored or reddish-brown, dome-shaped melanocytic tumors which tend to develop early in life (median 31 years, range 10–56 years) and increase in number with age [59]."

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"JAAD Game Changers: Clinical and dermoscopic features of cutaneous BAP1-inactivated melanocytic tumors: Results of a multicenter case-control study by the International Dermoscopy Society."

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"IL1RAP–xCT interactions may therefore alter xCT PTMs by affecting its association with other regulatory molecules, thereby enhancing its transporter activity or efficiency.Oncoproteins such as mutant KRAS and tumor suppressors such as p53 and BAP1 can activate or repress xCT, respectively, during tumorigenesis (36, 48, 49)."

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"Multiple Flesh-Colored Nodules: A Patient with Multiple BAP 1-Inactivated Melanocytic Tumors."

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"Germline mutations in BAP1 predispose carriers to the BAP1 tumor predisposition syndrome (BAP1-TPDS), characterized by BAP1-inactivated nevi (BINs), uveal melanoma, cutaneous melanoma, mesothelioma, renal cell carcinoma, and other tumors."

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"BINs are highly penetrant, present in up to 90% of mutation carriers, and typically present as multiple, skin colored or reddish-brown, dome-shaped melanocytic tumors (also or previously called BAP1-inactivlated melanocytic tumors, Wiesner nevi, BAPomas, nevoid melanoma-like melanocytic proliferations, BAP1 mutant Spitz nevi, and melanocytic BAP1-mutated atypical intradermal tumors)."

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"Although the MYCN protein was elevated upon BAP1 overexpression, our results of in vitro cells assay and in vivo xenograft assay using the BAP1 overexpressed BE2C and/or SH-EP Tet21/N cells demonstrated that, BAP1 overexpression could also inhibit cell proliferation, migration, colony formation and tumor growth which is similar with the results of BAP1 knockdown."

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"First, some tumor suppressors, such as p53 and BRCA1-associated protein 1 (BAP1), are involved in regulating ferroptosis in cancer cells (Jiang et al., 2015; Zhang et al., 2018)."

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"BAP1 can promote ferroptosis and suppress tumor tumorigenesis [39]."

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"Individuals with pathogenic BAP1 variants face an elevated risk of diverse tumors, notably BAP1-inactivated melanocytic nevi/tumors, uveal melanoma, cutaneous melanoma, mesothelioma, renal cell carcinoma, and basal cell carcinoma."

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"Genetic studies on PM reported a low prevalence of oncogene driver mutations and low tumor mutational burden, and the vast majority of recurrent mutations predominantly result in loss-of-function of tumor suppressors, including BAP1, TP53, CDKN2A, NF2, and LATS2 [12, 13]."

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"For example, the expression of the system xc− antiporter subunit SLC7A11, required for cystine uptake and GSH synthesis, is inhibited by the tumor suppressors BAP1 , p53 , and Kelch-like ECH-associated protein 1 (KEAP1) ."

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"The BAP1 gene encodes BRCA1-associated protein 1, which suppresses tumors by promoting the activity of the Hippo tumor suppressor pathway[20]."

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"Zhang et al. showed that BAP1 inhibits tumor progression by promoting cellular ferroptosis (15)."

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"In brief, in this WHO pathway I, these exceptions include some site-specific nevi, deep-penetrating/plexiform nevi, or melanocytomas; pigmented epithelioid melanocytomas; and BAP1-inactivated tumors or melanocytomas, in which atypia of the dermal component merits greater attention (as is also true in most advanced [beyond T1a] melanomas)."

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"These include deep-penetrating/plexiform nevi or tumors; BAP1-inactivated tumors; pigmented epithelioid melanocytoma; cellular blue nevi; and proliferative nodules and atypical variants."

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"In vivo results using a chicken embryo choriollantoic membrane ( CAM ) assay showed that BaP1 inhibits tumor growth , angiogenesis , and tumor proliferation ."

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"This mechanism contributes, at least in part, to BAP1-mediated tumor suppression in vivo ."

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"We excluded the OMT group because the number of patients per category (blue cell tumors, Wint Activated Melanocytic tumors, BAP1 inactivated tumors…"

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"High IP 3 R3-protein levels were found to be maintained by tumor suppressors BAP1 and PTEN, supporting cell death susceptibility."

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"However, it remains unknown how BAP1 loss promotes tumor progression."

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"Patients were older than 18, had received at least one form of treatment and 99% of them had BAP1 (BRCA1-associated protein 1) inactivated tumors."

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"OTUB1 overexpression is frequently found in various human cancers, which maintains high expression of SLC7A11 in cancer cells by posttranslational regulation of OTUB1.De-repression of SLC7A11 also promotes tumor development partly via inhibiting ferroptosis, e.g., genetic mutations or deletions of tumor suppressor p53 or BAP1."

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"Novel insights into the BAP1-inactivated melanocytic tumor."

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"These cases demonstrate the importance of routine BAP1 tumor testing in meningioma with rhabdoid features regardless of grade, germline testing for patients with BAP1 inactivated tumors, and tailored cancer screening in this population."

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"Because germline mutations produce a TPDS, genetic testing should be offered to patients found to have BAP1 inactivated tumors."

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"Ferroptosis at least partly mediates tumor-suppressive activities of several tumor suppressors such as p53 and BAP1 ."

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"Of note, knockdown of BAP1 promoted intrahepatic tumor metastasis, with both BAP1 knockdown groups (shBAP1#1 and shBAP1#3) showing more frequent irregular tumor borders with invasion into the adjacent liver parenchyma, more frequent tumor microsatellite formation and venous invasion (Fig. 3C, D)."

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"An Atypical Presentation of BAP1-Inactivated Melanocytic Tumor."

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"Mullerian adenosarcoma: clinicopathologic and molecular characterization highlighting recurrent BAP1 loss and distinctive features of high-grade tumors."

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"BAP1-inactivated melanocytic tumor (BIMT) is considered a type of intermediate melanocytic tumor [1]."

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"Fusions involved known tumor suppressors BAP1, MTAP, and LRP1B, and a clonal oncogenic fusion involving CACNA1D-ERC2, PARD3B-NT5DC2, and STAB2-NT5DC2 fusions were also identified as clonal fusions."

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"BAP1-inactivated melanocytic tumor (BIMT) is a group of melanocytic neoplasms with epithelioid cell morphology molecularly characterized by the loss of function of BAP1, a tumor suppressor gene located on chromosome 3p21, and a mutually exclusive mitogenic driver mutation, more commonly BRAF."

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"Mutation analyses revealed that the high-CRRS HCC patients had a high mutational frequency of some tumor suppressors such as tumor protein P53 (TP53) and Breast-cancer susceptibility gene 1 (BRCA1)-associated protein 1 (BAP1) and a low frequency of catenin beta 1 (CTNNB1)."

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"BAP1 inactivated melanocytic tumor: a case report."

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"This compound reduced the survival, proliferation, and migration of human colorectal cancer cells, and BaP1 blocked in vivo tumor growth and proliferation as well as angiogenesis."

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"Several tumor suppressors (such as p53, BRCA1-associated protein 1 (BAP1), and fumarase) exert their anti-tumor function by promoting ferroptosis, suggesting the potential physiological role of ferrop[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

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"Moreover, BAP1 partially prevents the progression of tumors via SLC7A11 as well as ferroptosis, and cancer-related BAP1 mutants end up losing their capacities to suppress SLC7A11 and to stimulate ferroptosis [25]."

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"The tumor inhibitor BAP1 is a ubiquitin carboxyl-terminal hydrolase with deubiquitination activity that is involved in regulating many cellular processes, such as DNA damage repair and programmed cell death [21]."

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"We postulate that, under oxidative conditions, PTEN may be promoting ferroptosis through its inhibition of AKT (1) by activating GSK3β, reducing expression of NRF2 and its target gene xCT, and depleting GSH pools and (2) through reducing mTOR activity and its downstream ferroptosis inhibitory mechanisms, as reported in other studies.Several other tumor suppressors, such as p53 and BAP1, have also been reported previously to promote ferroptosis, contributing to their tumor-suppressive properties."

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"For instance, hepatocellular carcinoma patients in the high cuprotosis-related risk score had a high mutational frequency of some tumor suppressors such as tumor protein P53 (TP53) and Breast-cancer susceptibility gene 1 (BRCA1)-associated protein 1 (BAP1) and a low frequency of catenin beta 1 (CTNNB1) [9]."

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"Tumor suppressors, such as BAP1 and p53, control the activation of ferroptosis ( Table 3 )."

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"While Elf4 deletion in MC38 cells does not alter the rate of tumor growth compared to control WT cells, Bap1 deletion in MC38 cells led to efficient clearance of the cancer cells."

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"Confirming previous findings [14], The Cancer Genome Atlas (TCGA) study reported that the tumor suppressors BAP1, CDKN2A, NF2, TP53, LATS2, and SETD2 were among the most frequently mutated in 74 PMs samples."

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"Loss of Bap1 increases tumor inflammation."

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"These results suggest that the infiltration of tumor antigen-specific CD8 T cells promoted by Bap1 deletion is dependent on cDC1 cells."

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"Consequently, our findings indicate that Bap1 deletion in cancer cells stimulates an anti-tumor response that relies on cDC1-CD8 T cell activation.Having observed a significant increase in antigen-specific CD8 T cells in Bap1-KO tumors, we sought to investigate the role of tumor antigen presentation in Bap1-KO tumor clearance."

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"It is worth noticing that, through 3p loss, cancer cells also delete other important tumor suppressors such as VHL, SETD2,BAP1, and PBRM1."

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"C1 possessed more mutations in three well‐known tumor suppressors including TP53 and BAP1, while C2 possessed more mutations in genes CTNNB1, APOB1, and EEF1A1 (Figure 3d)."

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"Zhang et al. showed that BAP1 inhibits tumor progression by promoting cellular ferroptosis ( 15 ) ."

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"Previous reports, including ours, have demonstrated that BAP1 could promote apoptosis and ferroptosis to inhibit tumor development."

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"The proband carrying the GPV in the BAP1 gene (MH20) was also diagnosed with cutaneous atypical spitzoid tumors, BIMTs (BAP1-inactivated melanocytic tumors), which are considered clinical markers of BAP1 germline mutation."

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"For one thing, well-known tumor suppressors including P53 and BAP1 have been reported to serve a functional purpose in ferroptosis, which demonstrated that ferroptosis serves as a natural obstacle in tumorigenesis [35,36]."

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"The addition of BAP1 loss increased tumor proliferation and melanoma size."

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"BAP1-Inactivated Melanoma Arising From BAP1-Inactivated Melanocytic Tumor in a Patient With BAP1 Germline Mutation: A Case Report and Review of the Literature."

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"BAP1-inactivated melanocytic tumors represent a subset of epithelioid melanocytic neoplasms resulting from biallelic inactivation of the BAP1 gene and by a driver mutation that activate the MAP kinase pathway, most commonly BRAFV600E."

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"BAP1 loss is crucial for the diagnosis of BAP1-inactivated melanocytic tumors, while PRKR1A1 loss supports the diagnosis of PEM.For predicting prognosis in melanomas, several GEP assays have been developed for risk stratification.For predicting response to systemic therapy in high-stage melanomas, BRAF mutation status must be assessed, either using IHC specific for the V600E mutant protein or using BRAF gene mutation analysis before BRAF-inhibitor and MEK-inhibitor therapy can be initiated.Overall, the role of molecular assays in characterizing melanocytic lesions is expanding, particularly for the purpose of differentiating between benign and malignant tumors."

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"BAP1 is identified to inhibit tumor proliferation by stabilizing LATS (Lee et al., 2020a), while tripartite motif-containing 29 (TRIM29) directly binds to YAP1 and avoids YAP1 from ubiquitinated degradation (Deng et al., 2021)."

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"Surprisingly, depletion of BAP1 significantly accelerated tumor growth in BALB/c mice (Figure 5D) and shortened the animal survival rate (Figure 5E)."

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"RAF1 fusions have been recently detected in cutaneous melanocytic neoplasms, including conventional melanoma, congenital nevus and BAP-1 inactivated tumors."

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"Together, these results demonstrated that tumor-infiltrating immune cells were attenuated by loss of BAP1, promoting B cell lymphoma proliferation in vivo."

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"The mutational landscape of MPM described low TMB and identified tumor suppressors BAP1, NF2, TP53, LATS2, and SETD2 as significant mutated genes [9]."

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"Sometimes, ferroptosis contributed to the antitumour effects of the tumor suppressors such as p53 and BAP1."

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"Inactivation of Vhl together with Pbrm1 in the Pax8 lineage induces low-grade ccRCC, while disruption of Vhl and Bap1 induces distinctive high-grade tumors (23)."

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"In addition, multiple tumor suppressors, such as p53 and BRCA1-associated protein 1 (BAP1), are affected by ferroptosis, confirming that ferroptosis inherently hinders cancer progression ."

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"Furthermore, tumor suppressors such as p53 and BRCA1-associated protein 1 hinder tumor growth partly by transcriptionally repressing SLC7A11 expression and promoting ferroptosis [ 32 , 33 ]."

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"For instance, tumor suppressor p53 and BAP1 could suppress tumor development by promoting either apoptotic or ferroptotic cell death."

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"This result suggested that BAP1 inhibited tumor progression partly via modulating SLC7A11 and ferroptosis [13]."

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"The homozygous loss of tumor suppressors BAP1 and PBRM1, found in both tumor samples may also contribute to cancer progression, because defective chromatin remodeling and HR repair over time will give rise to genomic instability (Thompson and Schild 2001; Hopson and Thompson 2017) and increased mutation rate, consistent with the findings in our study."

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"BAP1-TPDS is characterized by increased risk of solid tumors, including mesothelioma, cutaneous and uveal melanoma, renal cell carcinoma, and BAP1-inactivated melanocytic tumors [2]."

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"Thus targeting BAP1 may enhance the effect of tumor suppression [59]."

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"The tumor suppressors BAP1 and TP53 remained the genes whose alteration correlated significantly with objective response (Supplementary Table 5)."

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"Tumor suppressors such as p53 and BAP1 establish ferroptosis as a barrier to cancer development (Jiang et al., 2015; Zhang et al., 2018a), while evasion of ferroptosis contributes to tumor progression and resistance (Angeli et al., 2019)."

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"The BAP1 gene encodes BRCA1-associated protein 1 , which suppresses tumors by promoting the activity of the Hippo tumor suppressor pathway [ 20 ] ."

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"The knockdown of SLC7A11 in UMRC6 cells (a BAP1-deficient renal cancer cell line) marginally affects cancer cell proliferation, suggesting that the BAP1-mediated tumor suppression through regulating SLC7A11 [80]."

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"As for MPM, next-generation sequencing of 216 MPM patients showed that the tumor suppressors BAP1, NF2, and SETD2 were significantly mutated through gene fusions and splicing alterations (Bueno et al., 2015)."

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"In addition to asbestos exposure, DPM development depends mostly on the inactivation of tumor suppressors such as NF2, BAP1, and CDKN2A, the loss of which recapitulates DPM features also in mice (14, 42, 43)."

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"Re-mapping the mouse LUAD genome onto the human LUAD genome revealed that, in all samples investigated, oncogenes, such as AKT1 and tumor suppressors, such as PBRM1, SETD2, BAP1, and SMAD3, were recurrently affected by copy-number gains (pink) and losses (blue) respectively in both human and mouse tumors irrespective of E or EP status (Fig. 2a)."

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"3 The most commonly mutated genes identified were tumor suppressors or chromatin remodelers (such as BAP1, NF2, SETD2, DDX3X, etc.)."