IndraLab

Statements


OTUD4 is modified
9 | 57
OTUD4 is methylated.
| 42
OTUD4 is methylated. 10 / 42
| 42

sparser
"For this study, 514 samples obtained from 150 women were assessed cytologically and by Quantitative Multiplex Methylation-Specific PCR (QM-MSP) for methylation of cyclin D2, APC, HIN1, RASSF1A, and RAR-beta2."
| PMC

sparser
"In situ case tumors had more frequent methylation of HIN1 than invasive cancers (P=0.02)."

sparser
"Methylation of cyclin D2, APC, HIN1, RASSF1A, and RAR-beta2 was measured by quantitative multiplex methylation-specific PCR in 290 benign and malignant breast epithelial cell samples obtained by palpation-directed fine-needle aspiration biopsy from 164 women."

sparser
"The high specificity of HIN1 methylation in discriminating patients with NPC from normal individuals indicates its role as a tumor marker for NPC."

sparser
"CYCLIND2, GSTP1 , and HIN1 promoter methylation also appeared to modify the associations between obesity and BC-specific mortality, but the interaction was of borderline significance ( p < 0.10)."

sparser
"Certain genes methylated in precursor lesions of the esophagus demonstrate that DNA methylation may serve as esophageal cancer early detection marker, such as methylation of HIN1 , TFPI-2 , DACH1 , and SOX17."

sparser
"Synthetic log use was associated with elevated odds of HIN1 methylation (OR=2.14, 95%CI=1.34–3.42) and CDH1 methylation (OR=2.26, 95%CI=1.06–4.79) ( Table 4 )."

sparser
"Cases with detectable adducts were less likely to have a methylated HIN1 gene(ROR=0.66, 95%CI 0.42-1.05), although the confidence intervals included the null value and the interaction was not statistically significant (p ≥ 0.10)."

sparser
"Cumulative RASSF1A, TWIST1, and HIN1 gene methylation accurately distinguished ducts with cancerous versus benign lesions (100% sensitivity, 72% specificity, and area under the curve of 0.91 according to receiving operating characteristic analyses)."

sparser
"For heterogeneity analysis, AP2 methylation heterogeneity is associated with tumor size ( P < 0.01), CDH1 methylation heterogeneity is associated with lymph node metastasis ( P < 0.05), DACT2 methylation heterogeneity is associated with tumor size ( P < 0.01), HIN1 methylation heterogeneity is associated with tumor size and extra-thyroidal extension (all P < 0.01)."
OTUD4 is phosphorylated.
9 | 14
OTUD4 is phosphorylated. 10 / 14
| 14

sparser
"Studies have confirmed that casein kinase II (CK2) induces the phosphorylation of OTUD4 at residues Ser202, which is adjacent to the catalytic OTU domain ( xref )."

sparser
"This activity depends on the phosphorylation of OTUD4 near its catalytic domain ( xref ) as well as a putative UIM motif adjacent to the OTU domain ( xref )."

sparser
"In this study, we show that OTUD4, a K48-specific deubiquitinase which we previously showed to be important for maintaining the stability of alkylation repair enzymes ( xref ), has a completely distinct function in modulating innate immune signaling via NF-κB. We find that OTUD4 is phosphorylated in vivo , activating an unrecognized K63-linked deubiquitinase activity."

sparser
"Knockdown of the kinase CK2α or CK2α prime, or both in HEK293 cells decreased phosphorylation of purified OTUD4, and similarly impaired OTUD4 K63 DUB activity ( xref and xref )."

sparser
"In contrast, the phosphorylation of OTUD4 occurs at a SXXE/D motif xref which is recognised by the kinase casein kinase 2 (CK2) xref , xref ."

sparser
"Furthermore, CKII-induced phosphorylation of OTUD4 promoted the preferential hydrolysis of the Ub chain changed from K48- to K63-linked chains, which plays an essential role in innate immune signalling ( xref )."

sparser
"Zhao et al. demonstrate that OTUD4 is phosphorylated near its catalytic domain, activating a dormant K63-specific deubiquitinase activity."

sparser
"Whether or not OTUD4 is also phosphorylated when acting in these different compartments requires further investigation."

sparser
"Recent evidence however, has revealed that phosphorylation of OTUD4 can alter the enzymatic activity of the protein, permitting a K63-linkage specific deubiquitination of the Toll like receptor/ Interleukin-1 receptor (TLR/IL-1R) associated factor, MyD88 xref ."

sparser
"In addition, phosphorylation of OTUD4 confers K63 deubiquitinase activity, allowing it to deubiquitinate MyD88 and subsequently deactivate TLR-mediated NF-κB signaling [ xref ]."
OTUD4 is phosphorylated on S940. 9 / 9
9 |

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OTUD4 is ubiquitinated.
| 1
OTUD4 is ubiquitinated. 1 / 1
| 1

sparser
"FIGURE 5: ICP0-mediated ubiquitination of OTUD4 and VIM. (A) Venn diagram showing 12 proteins identified by both ICP0 interactome and ubiquitinome analyses. (B) Summary of ubiquitination sites on VIM (upper) and OTUD4 (lower)."
OTUD4 affects XPC
1 | 2 4
OTUD4 binds XPC.
| 4
| 4

sparser
"We validated the XPC-OTUD4 interaction by co-IP and demonstrated that OTUD4 knockdown in human cells indeed affects the levels of ubiquitinated XPC, supporting a hypothesis that the OTUD4 deubiquitinase is involved in XPC recycling by removing the ubiquitin moiety."

sparser
"We found that XPC and OTUD4 interact directly in a co-immunoprecipitation experiment ( xref )."

sparser
"In addition, we have validated the OTUD4XPC interaction in Human cells."

sparser
"Importantly, we validated the XPC-OTUD4 interaction by co-IP and provided evidence that OTUD4 knockdown in human cells indeed affects the levels of ubiquitinated XPC, supporting a hypothesis that the OTUD4 deubiquitinase is involved in XPC recycling by cleaving the ubiquitin moiety."
OTUD4 deubiquitinates XPC.
1 | 2
OTUD4 deubiquitinates XPC. 3 / 3
1 | 2

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"We speculate that deubiquitination of XPC by OTUD4 could be responsible for the removal of XPC from damage sites, possibly leading to XPC recycling."

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"It is not known whether OTUD4 works independently or cooperatively with USP7 to deubiquitinate XPC."

"Importantly, we validated the XPC-OTUD4 interaction by co-IP and provided evidence that OTUD4 knockdown in human cells indeed affects the levels of ubiquitinated XPC, supporting a hypothesis that the OTUD4 deubiquitinase is involved in XPC recycling by cleaving the ubiquitin moiety."
OTUD4 affects MAVS
1 | 3 2
OTUD4 deubiquitinates MAVS.
1 | 2
OTUD4 deubiquitinates MAVS. 3 / 3
1 | 2

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"That study showed that OTUD4 deubiquitinates and stabilizes MAVS, thereby activating downstream signaling in the RIG-I like receptor RNA sensing pathway."

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"However, OTUD4 positively regulates IFN signaling and enhances host antiviral activities by deubiquitinating K48-Ub on MAVS (66)."

"Induction of OTUD4 by viral infection promotes antiviral responses through deubiquitinating and stabilizing MAVS"
OTUD4 binds MAVS.
| 2
| 2

sparser
"The deubiquitinase OTUD4 interacts with MAVS to remove its K48-linked polyubiquitin chains and thereby maintains MAVS stability and promotes innate antiviral signaling."

sparser
"Viral infection leads to the IRF3/7-dependent upregulation of OTUD4 which interacts with MAVS to remove K48-linked polyubiquitin chains, thereby maintaining MAVS stability and promoting innate antiviral signaling."
OTUD4 activates MAVS.
| 1
OTUD4 activates MAVS. 1 / 1
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"OTUD4, a deubiquitinase, enhances MAVS mediated signaling by stabilizing MAVS and by eliminating K48 linked ubiquitins."
USP9X affects OTUD4
3 | 1 1
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"Characterization of ALKBH3 interacting proteins show that USP7 and USP9x associate with another DUB OTU deubiquitinase 4 (OTUD4) to form a protein complex that deubiquitinates ALKBH3 [XREF_BIBR]."

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sparser
"If indeed OTUD4-bound USP9X can affect TβR deubiquitination, it may explain both the catalytic and non-catalytic functions of OTUD4 in TGFβ regulation."

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USP7 affects OTUD4
4 | 1
4 | 1

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"Characterization of ALKBH3 interacting proteins show that USP7 and USP9x associate with another DUB OTU deubiquitinase 4 (OTUD4) to form a protein complex that deubiquitinates ALKBH3 [XREF_BIBR]."
OTUD4 affects USP9X
3 | 1 1
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"Characterization of ALKBH3 interacting proteins show that USP7 and USP9x associate with another DUB OTU deubiquitinase 4 (OTUD4) to form a protein complex that deubiquitinates ALKBH3 [XREF_BIBR]."

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sparser
"If indeed OTUD4-bound USP9X can affect TβR deubiquitination, it may explain both the catalytic and non-catalytic functions of OTUD4 in TGFβ regulation."

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OTUD4 affects USP7
4 | 1
4 | 1

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"Characterization of ALKBH3 interacting proteins show that USP7 and USP9x associate with another DUB OTU deubiquitinase 4 (OTUD4) to form a protein complex that deubiquitinates ALKBH3 [XREF_BIBR]."
OTUD4 affects ALKBH3
4 | 1
OTUD4 binds ALKBH3.
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OTUD4 deubiquitinates ALKBH3.
| 1
OTUD4 deubiquitinates ALKBH3. 1 / 1
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"Besides USP11, OTUD4 is another USP7 partner that deubiquitinates DNA demethylases ALKBH2 and ALKBH3 [118]."
OTUD4 affects AKT
| 5
OTUD4 inhibits AKT.
| 2
OTUD4 inhibits AKT. 2 / 2
| 2

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"Akt pathway activity repressed by HIN-1 was enhanced in HIF-2alpha-deficient human NSCLC cells and xenografts [XREF_BIBR]."

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"Expression of HIN-1 also inhibits Akt mediated retention of p27 in the cytoplasm."
| PMC
OTUD4 phosphorylates AKT.
| 1
OTUD4 leads to the phosphorylation of AKT. 1 / 1
| 1

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"Our results indicate that restoration of HIN-1 can enhance the susceptibility of cytotoxic drugs and increase the apoptosis related enzyme activities in H1N-1-transfected cancer cells by influencing the Akt phosphorylation."
OTUD4 decreases the amount of AKT.
| 1
Modified OTUD4 decreases the amount of phosphorylated AKT. 1 / 1
| 1

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"Furthermore, overexpression of HIN-1 reduces the expression of phosphorated-AKT (p-AKT), c-myc, Bcl-2 and cyclinD1 while Bax was increased."
OTUD4 activates AKT.
| 1
OTUD4 activates AKT. 1 / 1
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"AKT signaling pathway activated by HIN-1 methylation in non small cell lung cancer."
ICP0 affects OTUD4
| 3 2
ICP0 ubiquitinates OTUD4.
| 1 2
ICP0 ubiquitinates OTUD4. 3 / 3
| 1 2

sparser
"Indeed, we confirmed that both OTUD4 and VIM could be ubiquitinated by ICP0."

reach
"To examine whether VIM and OTUD4 were ubiquitinated by ICP0, we co-transfected ubiquitin, VIM or OTUD4, and ICP0 or its control (empty vector or ring finger mutant) into Neuro-2a cells before immunoprecipitation of VIM and OTUD4 and analysis of ubiquitination levels by Western blots."

sparser
"To examine whether VIM and OTUD4 were ubiquitinated by ICP0, we co-transfected ubiquitin, VIM or OTUD4, and ICP0 or its control (empty vector or ring finger mutant) into Neuro-2a cells before immunoprecipitation of VIM and OTUD4 and analysis of ubiquitination levels by Western blots."
ICP0 inhibits OTUD4.
| 2
ICP0 inhibits OTUD4. 2 / 2
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"However, in KOS-infected cells, neither overexpressing nor knocking down OTUD4 had a significant effect indicating an ICP0-dependent block of OTUD4 activity."

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"Comparison of WT and RFm viruses showed no indication of ICP0-induced degradation of OTUD4 or VIM at later times (Figure 6A)."
Harpin affects OTUD4
| 4
Harpin activates OTUD4.
| 3
Harpin activates OTUD4. 3 / 3
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"This showed that the harpin induced 1 (HIN1) gene is responsive to Spm."

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"The higher expression of HR marker genes, harpin-induced 1 (Hin1) and hypersensitivity-related (Hsr203JI), supported the role of C1 and Rep in HR response in plants."

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"In contrast to activation by beta-megaspermin, harpin (Psph)-induced activation of the 48-kD salicylic acid responsive mitogen activated protein kinase (MAPK) and HIN1 transcript accumulation were independent of extracellular calcium."
Harpin inhibits OTUD4.
| 1
Harpin inhibits OTUD4. 1 / 1
| 1

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"Inhibition of MAP kinase pathways, demonstrated by lack of SIPK kinase activity, affected elicitor induced accumulation of HIN1 transcript in tobacco cells treated with harpin from P. syringae pv."
XPC affects OTUD4
| 4
| 4

sparser
"We validated the XPC-OTUD4 interaction by co-IP and demonstrated that OTUD4 knockdown in human cells indeed affects the levels of ubiquitinated XPC, supporting a hypothesis that the OTUD4 deubiquitinase is involved in XPC recycling by removing the ubiquitin moiety."

sparser
"We found that XPC and OTUD4 interact directly in a co-immunoprecipitation experiment ( xref )."

sparser
"In addition, we have validated the OTUD4XPC interaction in Human cells."

sparser
"Importantly, we validated the XPC-OTUD4 interaction by co-IP and provided evidence that OTUD4 knockdown in human cells indeed affects the levels of ubiquitinated XPC, supporting a hypothesis that the OTUD4 deubiquitinase is involved in XPC recycling by cleaving the ubiquitin moiety."
OTUD4 affects TGFB
| 2 1 1
OTUD4 activates TGFB.
| 2 1
OTUD4 activates TGFB. 3 / 3
| 2 1

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"OTUD4 enhances TGFbeta signalling through regulation of the TGFbeta receptor complex."

eidos
"Specifically , we find that OTUD4 enhances TGFbeta signalling by promoting the membrane presence of TGFbeta receptor I. Furthermore , we demonstrate that OTUD4 inactivates the TGFbeta negative regulator SMURF2 suggesting that OTUD4 regulates multiple nodes of the TGFbeta pathway to enhance TGFbeta activity ."

eidos
"OTUD4 enhances TGFbeta signalling through regulation of the TGFbeta receptor complex ."
OTUD4 binds TGFB.
| 1
| 1

sparser
"We therefore sought to validate whether or not OTUD4 interacted with components of the TGFβ receptor complex."
OTUD4 affects RNF216
| 2 2
OTUD4 binds RNF216.
| 1 2
| 1 2

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"This possibility is bolstered by the observation of epistatic interactions between RNF216 and OTUD4, with simultaneous knockdown of both genes resulting in more severe phenotypes."

sparser
"Mutations in the ubiquitin ligase RNF216 and the deubiquitianse OTUD4 also associate with GHS."

sparser
"Indeed, the phenotype in the index pedigree appears to have been caused by the interaction of hypomorphic mutations in RNF216 and OTUD4 ."
OTUD4 inhibits RNF216.
| 1
OTUD4 inhibits RNF216. 1 / 1
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"The syndrome of hypogonadotropic hypogonadism, ataxia, and dementia can be caused by inactivating mutations in RNF216 or by the combination of mutations in RNF216 and OTUD4."
OTUD4 affects MYD88
| 4
| 4

sparser
"On the other hand, the amount of MyD88 associated with OTUD4 appeared minimally changed under the same conditions ( xref )."

sparser
"Immunoprecipitation of OTUD4 from mouse embryonic fibroblast (MEF) cell extracts demonstrated the interaction between OTUD4 and MyD88, suggesting that this interaction exists at the endogenous level ( xref )."

sparser
"Taken together, these results demonstrated that OTUD4 associates directly with MyD88."

sparser
"We confirmed the interaction of OTUD4 with MyD88 by immunoprecipitation (IP) of Flag-tagged MyD88, along with HA-tagged OTUD4 co-expressed in HEK293 cells ( xref )."
ALKBH3 affects OTUD4
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Bisphenol A affects OTUD4
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Bisphenol A increases the amount of OTUD4.
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Bisphenol A increases the amount of OTUD4. 2 / 2
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Bisphenol A decreases the amount of OTUD4.
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Bisphenol A decreases the amount of OTUD4. 1 / 1
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UBC affects OTUD4
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SMN2 affects OTUD4
| 3
| 1

sparser
"We found that endogenous SMN1, FLAG-tagged HuB (also known as ELAVL2) and MycIGF2BP3 interacted with OTUD4 ( xref C–E;)."
| 1

sparser
"In fact, treatment of lysates with RNase prior to IP reduced or abolished the interaction of OTUD4 with SMN1, HuB and G3BP1, suggesting that OTUD4 binds to these proteins via RNA ( xref C,D,F, right lane of each panel)."
| 1

sparser
"Because OTUD4 interacted with SMN1 in co-IPs and SMN1 has been well characterized in neuronal RNP granules ( xref ; xref ), we co-expressed mOrange2–OTUD4 with neonGreen–SMN1 in hippocampal neurons for live-cell imaging."
RNF216 affects OTUD4
| 1 2
| 1 2

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"This possibility is bolstered by the observation of epistatic interactions between RNF216 and OTUD4, with simultaneous knockdown of both genes resulting in more severe phenotypes."

sparser
"Mutations in the ubiquitin ligase RNF216 and the deubiquitianse OTUD4 also associate with GHS."

sparser
"Indeed, the phenotype in the index pedigree appears to have been caused by the interaction of hypomorphic mutations in RNF216 and OTUD4 ."
OTUD4 affects UBC
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OTUD4 affects SMN2
| 3
| 1

sparser
"We found that endogenous SMN1, FLAG-tagged HuB (also known as ELAVL2) and MycIGF2BP3 interacted with OTUD4 ( xref C–E;)."
| 1

sparser
"In fact, treatment of lysates with RNase prior to IP reduced or abolished the interaction of OTUD4 with SMN1, HuB and G3BP1, suggesting that OTUD4 binds to these proteins via RNA ( xref C,D,F, right lane of each panel)."
| 1

sparser
"Because OTUD4 interacted with SMN1 in co-IPs and SMN1 has been well characterized in neuronal RNP granules ( xref ; xref ), we co-expressed mOrange2–OTUD4 with neonGreen–SMN1 in hippocampal neurons for live-cell imaging."
OTUD4 affects NFkappaB
| 3
OTUD4 activates NFkappaB.
| 2
| 2

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"Knockout or knockdown of OTUD4 impairs RNA virus triggered activation of IRF3 and NF-kappaB, expression of their downstream target genes, and potentiates VSV replication in vitro and in vivo."

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"Additionally, the knockout of OTUD4 impairs RNA virus-triggered activation of IRF3 and NF-kB and the expression of their downstream target genes, and potentiates VSV replication in vitro and in vivo (66) ."
OTUD4 inhibits NFkappaB.
| 1
| 1

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"Additionally, the liver inflammatory response and tissue damage were ameliorated in mice overexpressing OTUD4.Taken together, these results show that OTUD4 can negatively regulate NF-kappaB activation by suppressing the K63 linked ubiquitination of TRAF6, thus alleviating hepatic ischemia-reperfusion injury."
OTUD4 affects FlaG
| 3
| 3

sparser
"These RNA-IPs showed a clear enrichment of RNA with FLAGOTUD4 compared to that seen in control IPs ( xref C)."

sparser
"We applied UV crosslinking to stabilize RNA–protein interactions, immunoprecipitated FLAGOTUD4 and subsequently isolated the co-precipitated RNA from OTUD4 or control beads."

sparser
"To elucidate whether the OTUD4 granules also contained RNA, we carried out in situ hybridization with a fluorescently (Cy3)-labeled oligo(dT) probe to detect poly(A)-tails of mRNAs ( xref B), together with immunostaining for FLAGOTUD4."
OTUD4 affects EGFP
| 3
| 3

sparser
"Primary rat hippocampal neurons were transfected with EGFPOTUD4 and imaged by confocal microscopy."

sparser
"EGFPOTUD4 resided not only in the cell body but also showed prominent granular structures in proximal and distal parts of axons and in dendrites ( xref A)."

sparser
"We stained EGFPOTUD4-expressing neurons with an anti-FMRP antibody to look for colocalization of EGFPOTUD4 and FMRP ( xref A)."
OTUD4 affects ADSL
| 3
OTUD4 decreases the amount of ADSL. 3 / 3
| 3

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"Mechanistically, knockout of OTUD4 results in hyper K63-linked ubiquitination of MyD88 and increases the activation of NF-κB and MAPKs to promote the expression of AMPs."

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"Here, we report that the ovarian tumor family deubiquitinase 4 (OTUD4) in Paneth cells restricts the expression of AMPs and thereby promotes experimental colitis and bacterial infection."

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"Knockout of OTUD4 promotes the expression of AMPs in intestinal organoids after stimulation with lipopolysaccharide (LPS) or peptidoglycan (PGN) and in the intestinal epithelial cells (IECs) of mice after DSS treatment or Salmonella typhimurium ( S ."
MAVS affects OTUD4
| 1 2
MAVS binds OTUD4.
| 2
| 2

sparser
"The deubiquitinase OTUD4 interacts with MAVS to remove its K48-linked polyubiquitin chains and thereby maintains MAVS stability and promotes innate antiviral signaling."

sparser
"Viral infection leads to the IRF3/7-dependent upregulation of OTUD4 which interacts with MAVS to remove K48-linked polyubiquitin chains, thereby maintaining MAVS stability and promoting innate antiviral signaling."
MAVS activates OTUD4.
| 1
MAVS activates OTUD4. 1 / 1
| 1

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"OTUD4 is induced by virus infection and targets MAVS ubiquitination, triggeringIRF3 and NF-κB signaling to sustain antiviral responses [85]."
FlaG affects OTUD4
| 3
| 3

sparser
"These RNA-IPs showed a clear enrichment of RNA with FLAGOTUD4 compared to that seen in control IPs ( xref C)."

sparser
"We applied UV crosslinking to stabilize RNA–protein interactions, immunoprecipitated FLAGOTUD4 and subsequently isolated the co-precipitated RNA from OTUD4 or control beads."

sparser
"To elucidate whether the OTUD4 granules also contained RNA, we carried out in situ hybridization with a fluorescently (Cy3)-labeled oligo(dT) probe to detect poly(A)-tails of mRNAs ( xref B), together with immunostaining for FLAGOTUD4."
EGFP affects OTUD4
| 3
| 3

sparser
"Primary rat hippocampal neurons were transfected with EGFPOTUD4 and imaged by confocal microscopy."

sparser
"EGFPOTUD4 resided not only in the cell body but also showed prominent granular structures in proximal and distal parts of axons and in dendrites ( xref A)."

sparser
"We stained EGFPOTUD4-expressing neurons with an anti-FMRP antibody to look for colocalization of EGFPOTUD4 and FMRP ( xref A)."
Vasotocin affects OTUD4
| 1 1
| 1 1

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"XREF_FIG d, AVT also decreases Otud4, Otud5 and Otud7b in addition to Otub1 and c-Maf."

eidos
"As shown in Fig. 5d , AVT also decreases Otud4 , Otud5 and Otud7b in addition to Otub1 / c-Maf ."
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Trichostatin A decreases the amount of OTUD4. 2 / 2
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MiR-103a-3p affects OTUD4
| 1 1
MiR-103a-3p inhibits OTUD4.
| 1
MiR-103a-3p inhibits OTUD4. 1 / 1
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eidos
"Increased miR-103a-3p expression leads to downregulation OTUD4 to stimulate ZIKV replication through the activation of p38 MAPK signaling pathway ."
MiR-103a-3p activates OTUD4.
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MiR-103a-3p activates OTUD4. 1 / 1
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"Zika virus infection induced the expression of miR-103a-3p, which subsequently activated p38 MAPK signaling pathway by targeting OTUD4 to facilitate ZIKV replication."
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Hsa-miR-6875-3p decreases the amount of OTUD4. 2 / 2
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Hsa-miR-6809-3p decreases the amount of OTUD4. 2 / 2
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Hsa-miR-6516-5p decreases the amount of OTUD4. 2 / 2
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Hsa-miR-5571-5p decreases the amount of OTUD4. 2 / 2
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Hsa-miR-513a-5p decreases the amount of OTUD4. 2 / 2
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Hsa-miR-498 affects OTUD4
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Hsa-miR-498 decreases the amount of OTUD4. 2 / 2
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Hsa-miR-4778-3p decreases the amount of OTUD4. 2 / 2
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Hsa-miR-4760-3p decreases the amount of OTUD4. 2 / 2
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Hsa-miR-4753-3p decreases the amount of OTUD4. 2 / 2
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Hsa-miR-4714-3p decreases the amount of OTUD4. 2 / 2
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Hsa-miR-455-3p decreases the amount of OTUD4. 2 / 2
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Hsa-miR-4282 decreases the amount of OTUD4. 2 / 2
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Hsa-miR-4272 decreases the amount of OTUD4. 2 / 2
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Hsa-miR-30b-5p decreases the amount of OTUD4. 2 / 2
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Hsa-miR-27b-3p decreases the amount of OTUD4. 2 / 2
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Hsa-miR-27a-3p decreases the amount of OTUD4. 2 / 2
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Hsa-miR-19b-3p decreases the amount of OTUD4. 2 / 2
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Hsa-miR-130b-5p decreases the amount of OTUD4. 2 / 2
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DsDNA affects OTUD4
| 2
OTUD4 binds dsDNA. 2 / 2
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"Structure based mutagenesis of OB1 N-terminal residues (Lys48 and Lys53) for minor groove interaction and of OB2 residues (Arg224) for major groove recognition showed that these positively charged residues are crucial for HIN1 and dsDNA interaction (XREF_FIG, XREF_SUPPLEMENTARY)."

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"Crystal structures of the p202 HIN1 and dsDNA complexes show that the two OB folds are very similar to those of AIM2, but that the dsDNA binds p202 HIN1 at an almost opposite surface compared with that used in AIM2 HIN (XREF_FIG) [XREF_BIBR, XREF_BIBR, XREF_BIBR]."
WBP2NL affects OTUD4
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TRAF1 affects OTUD4
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Smoke affects OTUD4
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Smoke increases the amount of OTUD4.
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Smoke increases the amount of OTUD4. 1 / 1
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Smoke decreases the amount of OTUD4.
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Smoke decreases the amount of OTUD4. 1 / 1
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SMN2 affects ELAVL2
| 2
| 1

sparser
"We found that endogenous SMN1, FLAG-tagged HuB (also known as ELAVL2) and MycIGF2BP3 interacted with OTUD4 ( xref C–E;)."
| 1

sparser
"In fact, treatment of lysates with RNase prior to IP reduced or abolished the interaction of OTUD4 with SMN1, HuB and G3BP1, suggesting that OTUD4 binds to these proteins via RNA ( xref C,D,F, right lane of each panel)."
RARB affects OTUD4
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RARB activates OTUD4. 2 / 2
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"RARbeta causes cell cycle arrest, growth inhibition and induction of apoptosis, and HIN-1 in cycle reentry [XREF_BIBR]."

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"RARbeta causes cell cycle arrest, growth inhibition and induction of apoptosis, and HIN-1 in cycle reentry [XREF_BIBR]."

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"The deubiquitinase OTUD4 inhibits the expression of antimicrobial peptides in Paneth cells to support intestinal inflammation and bacterial infection."

reach
"OTUD4 has been shown to deubiquitinate K63-linked chains of 274 myeoloid differentiation primary response 88 (MYD88) and to downregulate NF-kB-dependent 275 inflammation."
| DOI
OTUD4 affects dsDNA
| 2
OTUD4 binds dsDNA. 2 / 2
| 2

reach
"Structure based mutagenesis of OB1 N-terminal residues (Lys48 and Lys53) for minor groove interaction and of OB2 residues (Arg224) for major groove recognition showed that these positively charged residues are crucial for HIN1 and dsDNA interaction (XREF_FIG, XREF_SUPPLEMENTARY)."

reach
"Crystal structures of the p202 HIN1 and dsDNA complexes show that the two OB folds are very similar to those of AIM2, but that the dsDNA binds p202 HIN1 at an almost opposite surface compared with that used in AIM2 HIN (XREF_FIG) [XREF_BIBR, XREF_BIBR, XREF_BIBR]."
OTUD4 affects cisplatin
| 2
| 2

reach
"In this study, overexpression of HIN-1 enhanced ES2 cell sensitivity to paclitaxel and cisplatin through inhibiting cell growth and enhancing apoptosis."

reach
"Furthermore, overexpression of HIN-1 enhanced ES2 cell sensitivity to paclitaxel and cisplatin through significantly inhibiting cell growth and increasing early and late apoptosis, which supports the results of HIN-1 promoter methylation with downregulation of HIN-1 expression causing poor survival outcomes in OCCA patients."
| 2

reach
"Overexpression of OTUD4 increases radiosensitivity of NSCLC cells exhibiting as impaired clonogenic formation ability, enhanced cell cycle arrest and increased cell apoptosis."

reach
"Expression of HIN-1 in synchronized cells inhibits cell cycle re-entry and the phosphorylation of the retinoblastoma protein (Rb), while in exponentially growing cells HIN-1 induces apoptosis without apparent cell cycle arrest or an effect on Rb phosphorylation."
| PMC
OTUD4 affects WBP2NL
2 |
2 |

No evidence text available

No evidence text available
OTUD4 affects TRAF1
2 |
2 |

No evidence text available

No evidence text available
OTUD4 affects RB1
| 2
Modified OTUD4 leads to the dephosphorylation of RB1. 2 / 2
| 2

reach
"Expression of HIN-1 in synchronized cells inhibits cell cycle re-entry and the phosphorylation of the retinoblastoma protein (Rb), while in exponentially growing cells HIN-1 induces apoptosis without apparent cell cycle arrest or an effect on Rb phosphorylation."
| PMC

reach
"Expression of HIN-1 in synchronized cells inhibits cell cycle re-entry and the phosphorylation of the retinoblastoma protein (Rb), while in exponentially growing cells HIN-1 induces apoptosis without apparent cell cycle arrest or an effect on Rb phosphorylation."
| PMC
OTUD4 affects OTUD4
| 2
OTUD4 decreases the amount of OTUD4.
| 1
Methylated OTUD4 decreases the amount of OTUD4. 1 / 1
| 1

reach
"We also identified that methylation of HIN-1 downregulated the expression of HIN-1 in OCCA cell lines and cancerous tissues according to RT-PCR, Western blot, and IHC analyses."
OTUD4 activates OTUD4.
| 1
OTUD4 activates OTUD4. 1 / 1
| 1

reach
"To investigate the role of WRKY46 in plant defense, we analyzed expression of a luciferase (LUC) reporter driven by a routinely used W-box-containing defense related promoter, NDR1 and HIN1 like 10 (NHL10), in Arabidopsis protoplasts co-expressing either different variants of WRKY46 or CFP (as a control for expression of a defense unrelated protein)."

reach
"Furthermore, overexpression of OTUD4 could inhibit tumor cell proliferation, migration and invasion of breast, liver and lung cancer cells through inhibiting the AKT signaling pathway."

reach
"As further evidence that HIN-1 can influence invasive behavior, expression of HIN-1 markedly inhibited the invasion and migration of breast cancer cell lines in Boyden chamber assays."
| PMC
OTUD4 affects NIBAN2
| 1 1
| 1

reach
"ChIP, RNA binding protein immunoprecipitation assay and dual-luciferase reporter gene assay were applied to verify interaction between DNMT1 and MEG3, miR-494-3p and MEG3 and OTUD4."
| 1

sparser
"ChIP, RNA binding protein immunoprecipitation assay and dual-luciferase reporter gene assay were applied to verify interaction between DNMT1 and MEG3, miR-494-3p and MEG3 and OTUD4."
OTUD4 affects Interferon
| 2
OTUD4 increases the amount of Interferon. 2 / 2
| 2

reach
"[178] This is supported by the observation that knockout or knockdown of OTUD4 impairs the RNA virus triggered expression of type I interferon and enhances VSV replication, both in vitro and in vivo."

reach
"Therefore, OTUD4 could enhance type I IFN expression during HSV-1 infection, and this function appeared to be blocked by ICP0-dependent processes.After confirming that ICP0 was important for HSV-1 lytic infection in neuronal cells, we combined quantitative interactome and ubiquitinome approaches to identify targets of ICP0 followed by validation of the interaction and ubiquitination events in Neuro-2a cells."
OTUD4 affects IgG
| 2
OTUD4 activates IgG. 2 / 2
| 2

reach
"In coculture experiments, sorted pTFH cells supported HIN1 stimulated IgG production by autologous B cells only in vaccine responders."

reach
"In coculture experiments, pTfh supported HIN1 stimulated IgG production by autologous B cells."
OTUD4 affects IRF3
| 2
OTUD4 activates IRF3. 2 / 2
| 2

reach
"Knockout or knockdown of OTUD4 impairs RNA virus triggered activation of IRF3 and NF-kappaB, expression of their downstream target genes, and potentiates VSV replication in vitro and in vivo."

reach
"Additionally, the knockout of OTUD4 impairs RNA virus-triggered activation of IRF3 and NF-kB and the expression of their downstream target genes, and potentiates VSV replication in vitro and in vivo (66) ."
OTUD4 affects IGF2BP3
| 2
| 1

sparser
"We found that endogenous SMN1, FLAG-tagged HuB (also known as ELAVL2) and MycIGF2BP3 interacted with OTUD4 ( xref C–E;)."
| 1

sparser
"In contrast, the interaction of IGF2BP3 and TIAR with OTUD4 was even enhanced after RNase treatment ( xref E,G)."
OTUD4 affects IFNA
| 2
OTUD4 increases the amount of IFNA. 2 / 2
| 2

reach
"In concordance with the luciferase results, quantification of endogenous IFN-α mRNA showed that induction of IFN-α expression by KOS but not 7134 virus was obvious at an MOI of 2, and overexpressed OTUD4 significantly increased IFN-α mRNA levels in 7134 but not KOS infected cells (Figure 6F)."

reach
"At a lower MOI of 0.5, where induction of IFN-α expression was no longer detectable even in KOS infected cells, overexpressed OTUD4 significantly increased IFN-α mRNA levels in 7134 but not KOS virus infected cells."
OTUD4 affects GST
| 2
| 2

sparser
"GSTOTUD4 or GST protein alone, as a control, were coupled to glutathione–Sepharose beads and incubated with biotinylated RNA or without RNA."

sparser
"The fluorescence intensity in the presence of biotinylated RNA was more than 10-fold higher for GSTOTUD4 compared to the GST control, indicating that OTUD4 was able to bind RNA under these conditions ( xref B)."
OTUD4 affects ESS2
| 2
OTUD4 activates ESS2. 2 / 2
| 2

reach
"Furthermore, overexpression of HIN-1 enhanced ES2 cell sensitivity to paclitaxel and cisplatin through significantly inhibiting cell growth and increasing early and late apoptosis, which supports the results of HIN-1 promoter methylation with downregulation of HIN-1 expression causing poor survival outcomes in OCCA patients."

reach
"In this study, overexpression of HIN-1 enhanced ES2 cell sensitivity to paclitaxel and cisplatin through inhibiting cell growth and enhancing apoptosis."
OTUD4 affects ELAVL2
| 2
| 1

sparser
"We found that endogenous SMN1, FLAG-tagged HuB (also known as ELAVL2) and MycIGF2BP3 interacted with OTUD4 ( xref C–E;)."
| 1

sparser
"In fact, treatment of lysates with RNase prior to IP reduced or abolished the interaction of OTUD4 with SMN1, HuB and G3BP1, suggesting that OTUD4 binds to these proteins via RNA ( xref C,D,F, right lane of each panel)."
OTUD4 affects DNMT1
| 1 1
| 1

reach
"ChIP, RNA binding protein immunoprecipitation assay and dual-luciferase reporter gene assay were applied to verify interaction between DNMT1 and MEG3, miR-494-3p and MEG3 and OTUD4."
| 1

sparser
"ChIP, RNA binding protein immunoprecipitation assay and dual-luciferase reporter gene assay were applied to verify interaction between DNMT1 and MEG3, miR-494-3p and MEG3 and OTUD4."
OTUD4 affects ALKBH2
1 | 1
OTUD4 deubiquitinates ALKBH2.
| 1
OTUD4 deubiquitinates ALKBH2. 1 / 1
| 1

reach
"Besides USP11, OTUD4 is another USP7 partner that deubiquitinates DNA demethylases ALKBH2 and ALKBH3 [118]."
OTUD4 binds ALKBH2.
1 |
1 |

No evidence text available
NIBAN2 affects OTUD4
| 1 1
| 1

reach
"ChIP, RNA binding protein immunoprecipitation assay and dual-luciferase reporter gene assay were applied to verify interaction between DNMT1 and MEG3, miR-494-3p and MEG3 and OTUD4."
| 1

sparser
"ChIP, RNA binding protein immunoprecipitation assay and dual-luciferase reporter gene assay were applied to verify interaction between DNMT1 and MEG3, miR-494-3p and MEG3 and OTUD4."
IRF3/7 affects OTUD4
| 2
IRF3/7 activates OTUD4. 2 / 2
| 2

reach
"Viral infection leads to the IRF3/7 dependent upregulation of OTUD4 which interacts with MAVS to remove K48 linked polyubiquitin chains, thereby maintaining MAVS stability and promoting innate antiviral signaling."

reach
"Degradative ubiquitination is counteracted by DUBs, as shown for ovarian tumor family deubiquitinase 4 (OTUD4), whose expression is increased by IRF3/7 in a positive-feedback loop (Liuyu et al., 2019)."
IGF2BP3 affects OTUD4
| 2
| 1

sparser
"We found that endogenous SMN1, FLAG-tagged HuB (also known as ELAVL2) and MycIGF2BP3 interacted with OTUD4 ( xref C–E;)."
| 1

sparser
"In contrast, the interaction of IGF2BP3 and TIAR with OTUD4 was even enhanced after RNase treatment ( xref E,G)."
Harpin affects OTUD4
| 2
Harpin activates OTUD4. 2 / 2
| 2

reach
"Transcripts for several well studied pathogen induced genes were found to be up-regulated these include : a chitinase (AK099355), a chitinase precursor Oschib (AK100973), an aspartic protease Os11g0183900 (AK061884) as well as two Harpin induced 1 (Hin1) domain containing proteins (AK068115, AK108457)."

reach
"This contrasts with findings in tobacco, where Harpin triggered the PR gene HIN1 through calcium independent MAPK signalling XREF_BIBR."
GST affects OTUD4
| 2
| 2

sparser
"GSTOTUD4 or GST protein alone, as a control, were coupled to glutathione–Sepharose beads and incubated with biotinylated RNA or without RNA."

sparser
"The fluorescence intensity in the presence of biotinylated RNA was more than 10-fold higher for GSTOTUD4 compared to the GST control, indicating that OTUD4 was able to bind RNA under these conditions ( xref B)."
ELAVL2 affects SMN2
| 2
| 1

sparser
"We found that endogenous SMN1, FLAG-tagged HuB (also known as ELAVL2) and MycIGF2BP3 interacted with OTUD4 ( xref C–E;)."
| 1

sparser
"In fact, treatment of lysates with RNase prior to IP reduced or abolished the interaction of OTUD4 with SMN1, HuB and G3BP1, suggesting that OTUD4 binds to these proteins via RNA ( xref C,D,F, right lane of each panel)."
DNMT1 affects OTUD4
| 1 1
| 1

reach
"ChIP, RNA binding protein immunoprecipitation assay and dual-luciferase reporter gene assay were applied to verify interaction between DNMT1 and MEG3, miR-494-3p and MEG3 and OTUD4."
| 1

sparser
"ChIP, RNA binding protein immunoprecipitation assay and dual-luciferase reporter gene assay were applied to verify interaction between DNMT1 and MEG3, miR-494-3p and MEG3 and OTUD4."
Coal affects OTUD4
2 |
Coal increases the amount of OTUD4.
1 |
Coal increases the amount of OTUD4. 1 / 1
1 |

No evidence text available
Coal decreases the amount of OTUD4.
1 |
Coal decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
2 |
Air Pollutants increases the amount of OTUD4.
1 |
Air Pollutants increases the amount of OTUD4. 1 / 1
1 |

No evidence text available
Air Pollutants decreases the amount of OTUD4.
1 |
Air Pollutants decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
17alpha-ethynylestradiol increases the amount of OTUD4.
1 |
17alpha-ethynylestradiol increases the amount of OTUD4. 1 / 1
1 |

No evidence text available
17alpha-ethynylestradiol decreases the amount of OTUD4.
1 |
17alpha-ethynylestradiol decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
Α-GalCer affects OTUD4
| 1
Α-GalCer activates OTUD4. 1 / 1
| 1

reach
"The intranasal administration of NKT cell ligand ameliorated H1N1 IAV infection in piglets [51] , while the adjuvant effect of α-GalCer potentiated the immune response of the inactivated HIN1 influenza virus in pigs [52] ."
Vorinostat affects OTUD4
1 |
Vorinostat decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
Vinclozolin affects OTUD4
1 |
Vinclozolin decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
| 1
Valproic acid increases the amount of OTUD4. 1 / 1
| 1

reach
"In this study we demonstrated that the expression of HIN1 was upregulated by VPA and is associated with modulation of NB phenotype."
1 |
Troglitazone decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available

No evidence text available
TriggeringIRF3 affects OTUD4
| 1
TriggeringIRF3 activates OTUD4. 1 / 1
| 1

reach
"OTUD4 is induced by virus infection and targets MAVS ubiquitination, triggeringIRF3 and NF-κB signaling to sustain antiviral responses [85]."
Torcetrapib affects OTUD4
1 |
Torcetrapib increases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Thioacetamide increases the amount of OTUD4. 1 / 1
1 |

No evidence text available
Thimerosal affects OTUD4
1 |
Thimerosal decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
Tetrachloromethane increases the amount of OTUD4. 1 / 1
1 |

No evidence text available
Targets ubiquitination affects OTUD4
| 1
Targets ubiquitination activates OTUD4. 1 / 1
| 1

eidos
"OTUD4 is induced by virus infection and targets MAVS ubiquitination , triggeringIRF3 and NF-kappaB signaling to sustain antiviral responses [ 85 ] ."
Tamoxifen affects OTUD4
| 1
Tamoxifen leads to the methylation of OTUD4. 1 / 1
| 1

reach
"Tamoxifen did not modulate methylation of CCND2, HIN1, CST6, or RAR-beta2, but the mean difference for the sum of APC and RASSF1A methylation fractions between post-treatment and baseline samples was +7.1% for placebo subjects and -3.5% for tamoxifen subjects (P = 0.021)."
Succimer affects OTUD4
1 |
Succimer decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
Spermine affects OTUD4
| 1
| 1

reach
"Gene expression analysis in different plant species showed that Spm mediates the induction of several defense genes, such as members of the hairpin induced 1 (HIN1) family, proteinase inhibitors, the transcription repressor ZFT1, and HR associated factors."
1 |
Sodium dichromate increases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Sodium arsenate increases the amount of OTUD4. 1 / 1
1 |

No evidence text available
Potassium dichromate decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available

reach
"Overexpression of CC A 309 and ANL620, but not CC A 10-1, resulted in significantly higher transcription of several genes, including the HR cell death marker gene Harpin induced 1 (Hin1), a transcription factor for physiological substrates of mitogen activated protein kinases, WRKY8, a cytochrome P450 involved in sesquiterpene phytoalexin biosynthesis, CYP71D20, and Pathogenesis related gene 1 (PR1) (Gopalan et al., 1996; Glazebrook, 2005; Ishihama et al., 2011; Weitzel & Simonsen, 2015)."
1 |

No evidence text available
Pentanal affects OTUD4
1 |
Pentanal decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
Paracetamol affects OTUD4
1 |
Paracetamol decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
PTfh affects OTUD4
| 1
PTfh activates OTUD4. 1 / 1
| 1

reach
"In coculture experiments, pTfh supported HIN1 stimulated IgG production by autologous B cells."
PHIR11 affects OTUD4
| 1
PHIR11 activates OTUD4. 1 / 1
| 1

reach
"When inoculated to tobacco ' Bright Yellow ', P fluorescens (pHIR11) induces the HR and expression of four tobacco defense response genes : HIN1, RbohB, PAL, and PR1."
P202 affects OTUD4
| 1
P202 activates OTUD4. 1 / 1
| 1

reach
"As expected from deletion of HIN2 in reducing p202 and DNA interaction, we found that full-length p202 exhibits ~ 10-fold and ~ 5-fold enhanced affinity for DNA relative to p202 HIN1 and AIM2 HIN respectively (XREF_FIG), suggesting that full-length p202 may compete favorably with AIM2 for limited dsDNA in the cytosol."
Over-expression miR-103a-3p affects OTUD4
| 1
Over-expression miR-103a-3p inhibits OTUD4. 1 / 1
| 1

eidos
"By qRT-PCR and Western blot , we found OTUD4 expression was significantly downregulated by over-expression of miR-103a-3p compared to negative control ( Figure 4B ) ."
MiR-494-3p affects OTUD4
| 1
OTUD4 binds miR-494-3p. 1 / 1
| 1

reach
"ChIP, RNA binding protein immunoprecipitation assay and dual-luciferase reporter gene assay were applied to verify interaction between DNMT1 and MEG3, miR-494-3p and MEG3 and OTUD4."
MiR-29b-1-5p affects OTUD4
| 1
Modified miR-29b-1-5p increases the amount of OTUD4. 1 / 1
| 1

reach
"Furthermore, miR-29b-1-5p overexpression induces both inhibition of DNA N-methyltransferases (DNMT1, DNMT3A, and DNMT3B) expression and re-expression of HIN1, RASSF1A and CCND2."
Magnetite nanoparticle decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
Leflunomide affects OTUD4
1 |
Leflunomide increases the amount of OTUD4. 1 / 1
1 |

No evidence text available
Jinfukang affects OTUD4
1 |
Jinfukang decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
Ionomycin affects OTUD4
1 |
Ionomycin increases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hypochlorous acid increases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-93-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-767-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-766-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-744-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-7111-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-7106-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-6887-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-6885-3p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-6871-3p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-6870-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-6859-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-6825-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-6807-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-6795-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-6751-3p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-675-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-6513-3p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-570-3p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-5698 decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-5682 decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-5582-3p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-548x-3p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-548j-3p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-548aq-3p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-548am-3p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-548aj-3p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-548ah-3p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-548ae-3p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-526b-3p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-524-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-520d-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-519d-3p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-486-3p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-4796-3p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-4749-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-4723-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-4709-3p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-4706 decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-4699-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-4466 decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-4465 decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-4255 decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-3916 decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-3675-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-3662 decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-3646 decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-3591-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-3163 decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-3125 decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-31-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-30e-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-30d-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-30c-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-30a-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-29c-3p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-29b-3p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-29a-3p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-26b-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-26a-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-2681-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-219b-3p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-219a-2-3p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-219a-1-3p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-20b-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-20a-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-19a-3p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-18a-3p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-183-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-17-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-152-3p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-148b-3p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-148a-3p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-142-3p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-130b-3p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-1297 decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-1256 decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-1199-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-106b-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-106a-5p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-101-3p decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
Hrp affects OTUD4
| 1
Hrp activates OTUD4. 1 / 1
| 1

reach
"Hrp gene dependent induction of hin1 : a plant gene activated rapidly by both harpins and the avrPto gene mediated signal."
Hrp mutants affects OTUD4
| 1
Hrp mutants activates OTUD4. 1 / 1
| 1

reach
"P. fluorescens (a saprophyte) or hrp mutants defective in the Hrp secretion pathway did not induce hin1 significantly."
Harpin protein affects OTUD4
| 1
Harpin protein activates OTUD4. 1 / 1
| 1

reach
"HIN1 is induced by harpin protein and plays an important role in various plant defense responses."
Harpin binding site affects OTUD4
| 1
Harpin binding site activates OTUD4. 1 / 1
| 1

reach
"A harpin binding site in tobacco plasma membranes mediates activation of the pathogenesis related gene HIN1 independent of extracellular calcium but dependent on mitogen activated protein kinase activity."
1 |
Geldanamycin increases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |

No evidence text available
1 |
Dorsomorphin decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
Dioxygen affects OTUD4
| 1
Dioxygen increases the amount of OTUD4. 1 / 1
| 1

sparser
"CmCP-treated plant leaves showed symptoms of hypersensitive response including electrolyte leakage, reactive oxygen species generation and overexpression of defense-related genes PR-1 , PAD3 , ERF1 , HSR203J , and HIN1 ."
1 |
Cupric oxide decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
Copper(II) sulfate increases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |
Cobalt dichloride increases the amount of OTUD4. 1 / 1
1 |

No evidence text available
Butanal affects OTUD4
1 |
Butanal decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
1 |

No evidence text available
1 |
1 |

No evidence text available
Acetamide affects OTUD4
1 |
Acetamide decreases the amount of OTUD4. 1 / 1
1 |

No evidence text available
XopB affects OTUD4
| 1
XopB inhibits OTUD4. 1 / 1
| 1

reach
"XREF_BIBR showed recently that XopB suppresses flg22 mediated induction of the NHL10 (NDR1 and Hin1 like 10) promoter fused to luciferase which served as a reporter for basal defense."
XPO1 affects OTUD4
1 |
1 |

No evidence text available
| 1

eidos
"OTUD4 is induced by virus infection and targets MAVS ubiquitination , triggeringIRF3 and NF-kappaB signaling to sustain antiviral responses [ 85 ] ."
VTN affects OTUD4
1 |
1 |

No evidence text available
US9 affects OTUD4
1 |
1 |

No evidence text available
US22 affects OTUD4
1 |
1 |

No evidence text available
UDP1 affects OTUD4
| 1
UDP1 activates OTUD4. 1 / 1
| 1

reach
"Several defense genes, including WRKY28 and PTI5 of PAMP-triggered immunity (PTI), UDP and UDP1 of effector-triggered immunity (ETI), Hin1 and HSR203J of HR, PR1a of systemic acquired resistance (SAR) and the SAR related gene NPR1 were all up-regulated in transgenic tomato leaves overexpressing BvEP."
UDP affects OTUD4
| 1
UDP activates OTUD4. 1 / 1
| 1

reach
"Several defense genes, including WRKY28 and PTI5 of PAMP-triggered immunity (PTI), UDP and UDP1 of effector-triggered immunity (ETI), Hin1 and HSR203J of HR, PR1a of systemic acquired resistance (SAR) and the SAR related gene NPR1 were all up-regulated in transgenic tomato leaves overexpressing BvEP."
Toll Like Receptor affects OTUD4
| 1
OTUD4 binds Toll Like Receptor. 1 / 1
| 1

sparser
"Our mass spectrometry results suggested that OTUD4 is associated with the Toll-like receptor (TLR) associated factor MyD88 in cytosol extracts ( xref )."
TUBA1A affects OTUD4
1 |
1 |

No evidence text available
TSPYL6 affects OTUD4
1 |
1 |

No evidence text available
TPTE2 affects OTUD4
1 |
1 |

No evidence text available
TIAL1 affects OTUD4
| 1
| 1

sparser
"In contrast, the interaction of IGF2BP3 and TIAR with OTUD4 was even enhanced after RNase treatment ( xref E,G)."
TGFB affects OTUD4
| 1
| 1

sparser
"We therefore sought to validate whether or not OTUD4 interacted with components of the TGFβ receptor complex."
TCF4 affects OTUD4
1 |
1 |

No evidence text available

No evidence text available
Samsun nn affects OTUD4
| 1
Samsun nn increases the amount of OTUD4. 1 / 1
| 1

reach
"Transcription of HIN1 was greatly upregulated by inoculation of recombinant TMVs in both Samsun nn and Samsun NN at two different temperatures (25degreesC and 33degreesC) (XREF_FIG)."
STAT1 affects OTUD4
1 |
1 |

No evidence text available
SMN2 affects MYC
| 1
| 1

sparser
"We found that endogenous SMN1, FLAG-tagged HuB (also known as ELAVL2) and MycIGF2BP3 interacted with OTUD4 ( xref C–E;)."
SMN2 affects G3BP1
| 1
| 1

sparser
"In fact, treatment of lysates with RNase prior to IP reduced or abolished the interaction of OTUD4 with SMN1, HuB and G3BP1, suggesting that OTUD4 binds to these proteins via RNA ( xref C,D,F, right lane of each panel)."
SERPINB6 affects OTUD4
| 1
| 1

reach
"Several defense genes, including WRKY28 and PTI5 of PAMP-triggered immunity (PTI), UDP and UDP1 of effector-triggered immunity (ETI), Hin1 and HSR203J of HR, PR1a of systemic acquired resistance (SAR) and the SAR related gene NPR1 were all up-regulated in transgenic tomato leaves overexpressing BvEP."
RUNX1T1 affects OTUD4
1 |
1 |

No evidence text available
RPTN affects OTUD4
1 |
1 |

No evidence text available
REL affects OTUD4
1 |
1 |

No evidence text available
RC3H1 affects OTUD4
1 |
1 |

No evidence text available
RBP4 affects OTUD4
| 1
| 1

sparser
"Strikingly, OTUD4 interacted with many RBPs and was able to interact with RNA itself."
RBFOX2 affects OTUD4
1 |
1 |

No evidence text available
1 |
Plant Extracts increases the amount of OTUD4. 1 / 1
1 |

No evidence text available
PRPF4 affects OTUD4
1 |
1 |

No evidence text available
PCB 180 affects OTUD4
1 |
PCB 180 increases the amount of OTUD4. 1 / 1
1 |

No evidence text available
PARP11 affects OTUD4
1 |
1 |

No evidence text available
P.s. pv affects OTUD4
| 1
P.s. pv activates OTUD4. 1 / 1
| 1

reach
"Induction of hin1 by P.s. pv."
OTUD7A affects OTUD4
| 1
| 1

reach
"We found that OTUD3, OTUD4, OTUD6B, and OTUD7A bound to EWS–FLI1 in cells (Figure 3B)."
OTUD6B affects OTUD4
| 1
| 1

reach
"We found that OTUD3, OTUD4, OTUD6B, and OTUD7A bound to EWS–FLI1 in cells (Figure 3B)."
OTUD4 affects type I interferons
| 1
OTUD4 increases the amount of type I interferons. 1 / 1
| 1

reach
"Consistently, Cre-ER Otud4 fl/fl or Lyz2-Cre Otud4 fl/fl mice produce decreased levels of type I interferons and proinflammatory cytokines and exhibit increased sensitivity to VSV infection compared to their control littermates."
OTUD4 affects stimulating miR-103a-3p ZIKV replication
| 1
OTUD4 inhibits stimulating miR-103a-3p ZIKV replication. 1 / 1
| 1

eidos
"Taken together , these findings indicate that OTUD4 not only inhibits ZIKV replication through suppression of p38 MAPK signaling pathway but also attenuates the stimulating effect of miR-103a-3p on ZIKV replication ."
OTUD4 affects specific deubiquitinase
| 1
OTUD4 activates specific deubiquitinase. 1 / 1
| 1

reach
"Here, we demonstrate that the deubiquitinase OTUD4, which nominally encodes a K48 specific deubiquitinase, is phosphorylated near its catalytic domain, activating a latent K63 specific deubiquitinase."
OTUD4 affects simulating replication
| 1
OTUD4 inhibits simulating replication. 1 / 1
| 1

eidos
"Most importantly , OTUD4 attenuated the simulating effect of miR-103a-3p on ZIKV replication together with inhibition of p38 MAPK signaling pathway ( Figures 5G , H ) ."
OTUD4 affects silencing OTUD4
| 1
OTUD4 activates silencing OTUD4. 1 / 1
| 1

eidos
"Zhao et al. ( 2018 ) revealed that OTUD4 negatively modulated TLR-mediated NF-kappaB activation and silencing of OTUD4 increased the phosphorylation of p38 MAPK upon the stimulation of IL-1beta ."
OTUD4 affects pyroptosis
| 1
| 1

reach
"Mechanistically, OTUD4 deubiquitinated and stabilized GSDME, enhancing radiosensitivity of NPC cells by promoting pyroptosis."
OTUD4 affects pathway
| 1
OTUD4 activates pathway. 1 / 1
| 1

sparser
"OTUD4 activates the canonical TGFβ pathway."
OTUD4 affects p38
| 1
OTUD4 inhibits p38. 1 / 1
| 1

reach
"In contrast, OTUD4 over-expression inhibited p38 MAPK activation and decreased ZIKV replication."
OTUD4 affects p38 Mitogen-Activated Protein Kinase
| 1
OTUD4 activates p38 Mitogen-Activated Protein Kinase. 1 / 1
| 1

reach
"MiR-103a-3p Promotes Zika Virus Replication by Targeting OTU Deubiquitinase 4 to Activate p38 Mitogen-Activated Protein Kinase Signaling Pathway."
OTUD4 affects miR-494-3p
| 1
OTUD4 binds miR-494-3p. 1 / 1
| 1

reach
"ChIP, RNA binding protein immunoprecipitation assay and dual-luciferase reporter gene assay were applied to verify interaction between DNMT1 and MEG3, miR-494-3p and MEG3 and OTUD4."
OTUD4 affects miR-103a-3p
| 1
OTUD4 inhibits miR-103a-3p. 1 / 1
| 1

reach
"In addition, OTUD4 over-expression attenuated the stimulating effect of miR-103a-3p on ZIKV replication and activation of p38 MAPK signaling."
OTUD4 affects host antiviral
| 1
OTUD4 activates host antiviral. 1 / 1
| 1

eidos
"However , OTUD4 positively regulates IFN signaling and enhances host antiviral activities by deubiquitinating K48-Ub on MAVS ( 66 ) ."

sparser
"Moreover, Rad51 staining confirmed that OTUD4 inhibited HR in NSCLC cells as indicated by less Rad51 foci in OTUD4 overexpressing cells after IR treatment (Fig.  xref e, f)."

reach
"Interestingly, one study reported that OTUD4 is induced during RNA virus infection to promote antiviral response (Liuyu et al., 2019), which is analogous to the role of OTUD4 in HSV-1 infection that we report here."

reach
"Furthermore, overexpression of OTUD4 could inhibit tumor cell proliferation, migration and invasion of breast, liver and lung cancer cells through inhibiting the AKT signaling pathway."
| 1

reach
"HIN-1 is a potent inhibitor of anchorage dependent and anchorage independent cell growth, cell migration, and invasion [XREF_BIBR, XREF_BIBR]."
OTUD4 affects cell growth
| 1
| 1

reach
"Reintroduction of HIN-1 into breast cancer cells inhibits cell growth."
OTUD4 affects cell cycle
| 1
| 1

reach
"Overexpression of OTUD4 increases radiosensitivity of NSCLC cells exhibiting as impaired clonogenic formation ability, enhanced cell cycle arrest and increased cell apoptosis."
OTUD4 affects arm
| 1
OTUD4 inhibits arm. 1 / 1
| 1

reach
"HIn1 (I) extensively suppresses recombination in heterozygotes in the right arm of chromosome I from unc-75 to unc-54."
OTUD4 affects ammonium
| 1
| 1

reach
"Furthermore, the silencing of Hsp70 also suppressed l-methionine sulfoximine induced cell death and hin1 expression and caused the over-accumulation of ammonium ions."
OTUD4 affects activation miR-103a-3p p38 MAPK signaling pathway
| 1
OTUD4 inhibits activation miR-103a-3p p38 MAPK signaling pathway. 1 / 1
| 1

eidos
"Moreover , OTUD4 attenuated the activation effect of miR-103a-3p on the p38 MAPK signaling pathway as shown by the decreased phosphorylation levels of both p-p38 MAPK and p-HSP27 in the presence of OTUD4 over-expression ( Figure 5H ) ."
OTUD4 affects Zika
| 1
OTUD4 activates Zika. 1 / 1
| 1

reach
"MiR-103a-3p Promotes Zika Virus Replication by Targeting OTU Deubiquitinase 4 to Activate p38 Mitogen-Activated Protein Kinase Signaling Pathway."
OTUD4 affects ZIKV replication
| 1
OTUD4 inhibits ZIKV replication. 1 / 1
| 1

eidos
"Taken together , these findings indicate that OTUD4 not only inhibits ZIKV replication through suppression of p38 MAPK signaling pathway but also attenuates the stimulating effect of miR-103a-3p on ZIKV replication ."
OTUD4 affects XPO1
1 |
1 |

No evidence text available
OTUD4 affects VTN
1 |
1 |

No evidence text available
OTUD4 affects US9
1 |
1 |

No evidence text available
OTUD4 affects US22
1 |
1 |

No evidence text available
OTUD4 affects Toll Like Receptor
| 1
OTUD4 binds Toll Like Receptor. 1 / 1
| 1

sparser
"Our mass spectrometry results suggested that OTUD4 is associated with the Toll-like receptor (TLR) associated factor MyD88 in cytosol extracts ( xref )."
OTUD4 affects TUBA1A
1 |
1 |

No evidence text available
OTUD4 affects TSPYL6
1 |
1 |

No evidence text available
OTUD4 affects TPTE2
1 |
1 |

No evidence text available
OTUD4 affects TLR-mediated NF-kappaB
| 1
OTUD4 activates TLR-mediated NF-kappaB. 1 / 1
| 1

eidos
"Zhao et al. ( 2018 ) revealed that OTUD4 negatively modulated TLR-mediated NF-kappaB activation and silencing of OTUD4 increased the phosphorylation of p38 MAPK upon the stimulation of IL-1beta ."
OTUD4 affects TIAL1
| 1
| 1

sparser
"In contrast, the interaction of IGF2BP3 and TIAR with OTUD4 was even enhanced after RNase treatment ( xref E,G)."
OTUD4 affects TCF4
1 |
1 |

No evidence text available

No evidence text available
OTUD4 affects STAT1
1 |
1 |

No evidence text available
OTUD4 affects SMURF2
| 1
OTUD4 inhibits SMURF2. 1 / 1
| 1

sparser
"Specifically, we find that OTUD4 enhances TGFβ signalling by promoting the membrane presence of TGFβ receptor I. Furthermore, we demonstrate that OTUD4 inactivates the TGFβ negative regulator SMURF2 suggesting that OTUD4 regulates multiple nodes of the TGFβ pathway to enhance TGFβ activity."
OTUD4 affects SMAD2
| 1
OTUD4 phosphorylates SMAD2. 1 / 1
| 1

sparser
"The observation that OTUD4 can still induce SMAD2 phosphorylation in the presence of SMURF2 29/30, despite not being able induce the inactive state of the ligase, indicates that this may be a potential mechanism of action."
OTUD4 affects Receptor Kinase 1
| 1
OTUD4 activates Receptor Kinase 1. 1 / 1
| 1

reach
"The flg22 induces the expression of defence genes such as flg22 induced Receptor Kinase 1 (FRK1), cytochrome P450 monooxygenase (CYP81F2) and NDR1 and HIN1 like 10 (NHL10) (Boudsocq etal., 2010)."
OTUD4 affects RUNX1T1
1 |
1 |

No evidence text available
OTUD4 affects RPTN
1 |
1 |

No evidence text available
OTUD4 affects REL
1 |
1 |

No evidence text available
OTUD4 affects RC3H1
1 |
1 |

No evidence text available
OTUD4 affects RBP4
| 1
| 1

sparser
"Strikingly, OTUD4 interacted with many RBPs and was able to interact with RNA itself."
OTUD4 affects RBFOX2
1 |
1 |

No evidence text available
OTUD4 affects PRPF4
1 |
1 |

No evidence text available
OTUD4 affects PARP11
1 |
1 |

No evidence text available
OTUD4 affects OTUD7A
| 1
| 1

reach
"We found that OTUD3, OTUD4, OTUD6B, and OTUD7A bound to EWS–FLI1 in cells (Figure 3B)."
OTUD4 affects OTUD6B
| 1
| 1

reach
"We found that OTUD3, OTUD4, OTUD6B, and OTUD7A bound to EWS–FLI1 in cells (Figure 3B)."
OTUD4 affects OTUD3
| 1
| 1

reach
"We found that OTUD3, OTUD4, OTUD6B, and OTUD7A bound to EWS–FLI1 in cells (Figure 3B)."
OTUD4 affects ODAPH
1 |
1 |

No evidence text available
OTUD4 affects OAT
1 |
1 |

No evidence text available
OTUD4 affects Neoplasms
| 1
| 1

reach
"The results suggest that CDH1 and HIN1 methylation heterogeneity may increase tumor metastasis."

reach
"The results suggest that CDH1 and HIN1 methylation heterogeneity may increase tumor metastasis."
OTUD4 affects NTS
| 1
OTUD4 activates NTS. 1 / 1
| 1

reach
"Transcription of HIN1 was greatly upregulated by inoculation of recombinant TMVs in both Samsun nn and Samsun NN at two different temperatures (25degreesC and 33degreesC) (XREF_FIG)."
OTUD4 affects NPEPPS
1 |
1 |

No evidence text available
OTUD4 affects NMD3
1 |
1 |

No evidence text available
OTUD4 affects NF-kB-dependent inflammation
| 1
OTUD4 inhibits NF-kB-dependent inflammation. 1 / 1
| 1

eidos
"OTUD4 has been shown to deubiquitinate K63-linked chains of myeloid differentiation primary response 88 ( MYD88 ) and to downregulate NF-kB-dependent inflammation ."
OTUD4 affects NDRG1
| 1
OTUD4 activates NDRG1. 1 / 1
| 1

reach
"To investigate the role of WRKY46 in plant defense, we analyzed expression of a luciferase (LUC) reporter driven by a routinely used W-box-containing defense related promoter, NDR1 and HIN1 like 10 (NHL10), in Arabidopsis protoplasts co-expressing either different variants of WRKY46 or CFP (as a control for expression of a defense unrelated protein)."
OTUD4 affects NAF1
1 |
1 |

No evidence text available
OTUD4 affects Mice
| 1
OTUD4 activates Mice. 1 / 1
| 1

reach
"The expression of NOD-like receptor pyrin domain containing 3 (NLRP3) and toll- like-receptor-4 (TLR4) was assayed by IHC in the lungs and intestine in HIN1 virus-induced mice to evaluate the whole efficacy of the protective effects on lungs and intestines."
OTUD4 affects MYCBP
1 |
1 |

No evidence text available
OTUD4 affects MYC
| 1
| 1

sparser
"We found that endogenous SMN1, FLAG-tagged HuB (also known as ELAVL2) and MycIGF2BP3 interacted with OTUD4 ( xref C–E;)."
OTUD4 affects MOG
1 |
1 |

No evidence text available
OTUD4 affects MKRN3
| 1
| 1

sparser
"We also examined MKRN3 interactions among 37 genes implicated in CHH ( xref – xref ), and found that MKRN3 interacts with OTUD4."
OTUD4 affects LHX6
1 |
1 |

No evidence text available
OTUD4 affects KRT85
1 |
1 |

No evidence text available
OTUD4 affects KRT8
1 |
1 |

No evidence text available
OTUD4 affects KRT36
1 |
1 |

No evidence text available
OTUD4 affects KRT33B
1 |
1 |

No evidence text available
OTUD4 affects KRT31
1 |
1 |

No evidence text available
OTUD4 affects KANSL3
| 1
| 1

sparser
"Their target sequences are as follows: ACO8-si1, GACCCTAACCTTCACAAGA; ACOT8 -si2, CCAAACAGATGTTCTGGGT; C1QBP-si1, CCACCTAAT GGATTTCCTT; C1QBP-si2, CATTTGATGGTGAGGAGGA; OTUD4-si1, GCTTCTTCATGCTGAATAT; OTUD4-si2, CCAG CAGAACATATACCTT; SNX9-si1, GTGGGTTTATCCTACCT CT; SNX9-si2, CGGATCTATGATTACAACA; VIM-si1, CAGA CAGGATGTTGACAAT; VIM-si2, CTTCTCAGCATCACGA TGA."
OTUD4 affects IQCN
1 |
1 |

No evidence text available
OTUD4 affects ILK
1 |
1 |

No evidence text available
OTUD4 affects IFNB1
| 1
OTUD4 increases the amount of IFNB1. 1 / 1
| 1

reach
"Unexpectedly, OTUD4 also increased luciferase activity during mock infection suggesting that OTUD4 could raise the baseline expression of IFN-β in unstimulated cells."
OTUD4 affects HTRA4
1 |
1 |

No evidence text available
OTUD4 affects HSF2
1 |
1 |

No evidence text available
OTUD4 affects HARPIN-INDUCED 1
| 1
OTUD4 activates HARPIN-INDUCED 1. 1 / 1
| 1

reach
"Take HARPIN INDUCED 1 (HIN1) for example, the expression of HIN1 was strongly upregulated during leaf- and flower-senescence after TMV infection in tobacco XREF_BIBR."
OTUD4 affects H3C6
1 |
1 |

No evidence text available
OTUD4 affects GSDME
| 1
OTUD4 deubiquitinates GSDME. 1 / 1
| 1

reach
"GSDME-dependent pyroptosis is a critical determinant of radiosensitivity in NPC, and is modulated by OTUD4 via deubiquitinating and stabilizing GSDME."
OTUD4 affects GRK5
1 |
1 |

No evidence text available
OTUD4 affects GPHN
1 |
1 |

No evidence text available
OTUD4 affects GLA
1 |
1 |

No evidence text available
OTUD4 affects GAR1
1 |
1 |

No evidence text available
OTUD4 affects GALK1
1 |
1 |

No evidence text available
OTUD4 affects G3BP1
| 1
| 1

sparser
"In fact, treatment of lysates with RNase prior to IP reduced or abolished the interaction of OTUD4 with SMN1, HuB and G3BP1, suggesting that OTUD4 binds to these proteins via RNA ( xref C,D,F, right lane of each panel)."
OTUD4 affects Flag
| 1
| 1

sparser
"OTUD4 was over-expressed by transfection with Flag-OTUD4 plasmid."
OTUD4 affects FXR2
1 |
1 |

No evidence text available
OTUD4 affects FMNL1
1 |
1 |

No evidence text available
OTUD4 affects FLNC
1 |
1 |

No evidence text available
OTUD4 affects FAN1
1 |
1 |

No evidence text available
OTUD4 affects EXOSC8
1 |
1 |

No evidence text available
OTUD4 affects DUSP10
1 |
1 |

No evidence text available
OTUD4 affects DSG1
1 |
1 |

No evidence text available
OTUD4 affects DNAJB1
1 |
1 |

No evidence text available
OTUD4 affects DNA N-methyltransferases
| 1
OTUD4 decreases the amount of DNA N-methyltransferases. 1 / 1
| 1

reach
"Furthermore, miR-29b-1-5p overexpression induces both inhibition of DNA N-methyltransferases (DNMT1, DNMT3A, and DNMT3B) expression and re-expression of HIN1, RASSF1A and CCND2."
OTUD4 affects CYLD
1 |
1 |

No evidence text available
OTUD4 affects CLEC3B
1 |
1 |

No evidence text available
OTUD4 affects CDKN1B
| 1
OTUD4 inhibits CDKN1B. 1 / 1
| 1

reach
"Expression of HIN-1 also inhibits Akt mediated retention of p27 in the cytoplasm."
| PMC

reach
"The deubiquitinase OTUD4 inhibits the expression of antimicrobial peptides in Paneth cells to support intestinal inflammation and bacterial infection."
OTUD4 affects BRF2
1 |
1 |

No evidence text available
OTUD4 affects BAG5
1 |
1 |

No evidence text available
OTUD4 affects ATG12
1 |
1 |

No evidence text available
OTUD4 affects AGO3
1 |
1 |

No evidence text available
OTUD4 affects AGO2
| 1
| 1

sparser
"The result in Fig.  xref F revealed that compared with IgG group, quantity of miR-494-3p and OTUD4 bound by Ago2 was significantly increased."
OTUD3 affects OTUD4
| 1
| 1

reach
"We found that OTUD3, OTUD4, OTUD6B, and OTUD7A bound to EWS–FLI1 in cells (Figure 3B)."
ODAPH affects OTUD4
1 |
1 |

No evidence text available
OAT affects OTUD4
1 |
1 |

No evidence text available
NUP214 affects OTUD4
| 1
NUP214 increases the amount of OTUD4. 1 / 1
| 1

reach
"HpaXpm and the heated HpaXpm protein can effectively induce the expression of Hin1 and Hsr203J."
NPEPPS affects OTUD4
1 |
1 |

No evidence text available
NMD3 affects OTUD4
1 |
1 |

No evidence text available
NIBAN2 affects DNMT1
| 1
| 1

sparser
"ChIP, RNA binding protein immunoprecipitation assay and dual-luciferase reporter gene assay were applied to verify interaction between DNMT1 and MEG3, miR-494-3p and MEG3 and OTUD4."
NFkappaB affects OTUD4
| 1
| 1

sparser
"OTU deubiquitinase 4 (OTUD4) is a member of OTD deubiquitinase (DUB) family, which participates in various physiological and pathological processes, such as embryonic development of zebrafish, repair of DNA alkylation damage, and innate immune response ( xref ; xref , xref ; xref ). xref revealed that OTUD4 negatively modulated TLR-mediated NF-κB activation and silencing of OTUD4 increased the phosphorylation of p38 MAPK upon the stimulation of IL-1β."
NF-kappaB signaling affects OTUD4
| 1
NF-kappaB signaling activates OTUD4. 1 / 1
| 1

eidos
"OTUD4 is induced by virus infection and targets MAVS ubiquitination , triggeringIRF3 and NF-kappaB signaling to sustain antiviral responses [ 85 ] ."
NDRG1 affects OTUD4
| 1
NDRG1 activates OTUD4. 1 / 1
| 1

reach
"To investigate the role of WRKY46 in plant defense, we analyzed expression of a luciferase (LUC) reporter driven by a routinely used W-box-containing defense related promoter, NDR1 and HIN1 like 10 (NHL10), in Arabidopsis protoplasts co-expressing either different variants of WRKY46 or CFP (as a control for expression of a defense unrelated protein)."
NAF1 affects OTUD4
1 |
1 |

No evidence text available
MYCBP affects OTUD4
1 |
1 |

No evidence text available
MYC affects SMN2
| 1
| 1

sparser
"We found that endogenous SMN1, FLAG-tagged HuB (also known as ELAVL2) and MycIGF2BP3 interacted with OTUD4 ( xref C–E;)."
MOG affects OTUD4
1 |
1 |

No evidence text available
MKRN3 affects OTUD4
| 1
| 1

sparser
"We also examined MKRN3 interactions among 37 genes implicated in CHH ( xref – xref ), and found that MKRN3 interacts with OTUD4."
LHX6 affects OTUD4
1 |
1 |

No evidence text available
L-methionine sulfoximine increases the amount of OTUD4. 1 / 1
| 1

reach
"Furthermore, the silencing of Hsp70 also suppressed l-methionine sulfoximine induced cell death and hin1 expression and caused the over-accumulation of ammonium ions."
KRT85 affects OTUD4
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No evidence text available
KRT8 affects OTUD4
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No evidence text available
KRT36 affects OTUD4
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No evidence text available
KRT33B affects OTUD4
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No evidence text available
KRT31 affects OTUD4
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No evidence text available
KANSL3 affects OTUD4
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| 1

sparser
"Their target sequences are as follows: ACO8-si1, GACCCTAACCTTCACAAGA; ACOT8 -si2, CCAAACAGATGTTCTGGGT; C1QBP-si1, CCACCTAAT GGATTTCCTT; C1QBP-si2, CATTTGATGGTGAGGAGGA; OTUD4-si1, GCTTCTTCATGCTGAATAT; OTUD4-si2, CCAG CAGAACATATACCTT; SNX9-si1, GTGGGTTTATCCTACCT CT; SNX9-si2, CGGATCTATGATTACAACA; VIM-si1, CAGA CAGGATGTTGACAAT; VIM-si2, CTTCTCAGCATCACGA TGA."
K 7174 affects OTUD4
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K 7174 increases the amount of OTUD4. 1 / 1
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No evidence text available
IQCN affects OTUD4
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No evidence text available
ILK affects OTUD4
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No evidence text available
IGF2BP3 affects TIAL1
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| 1

sparser
"In contrast, the interaction of IGF2BP3 and TIAR with OTUD4 was even enhanced after RNase treatment ( xref E,G)."
IGF2BP3 affects SMN2
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sparser
"We found that endogenous SMN1, FLAG-tagged HuB (also known as ELAVL2) and MycIGF2BP3 interacted with OTUD4 ( xref C–E;)."
IGF2BP3 affects OTUD4, and TIAL1
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sparser
"In contrast, the interaction of IGF2BP3 and TIAR with OTUD4 was even enhanced after RNase treatment ( xref E,G)."
IGF2BP3 affects MYC
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sparser
"We found that endogenous SMN1, FLAG-tagged HuB (also known as ELAVL2) and MycIGF2BP3 interacted with OTUD4 ( xref C–E;)."
ICP0-interacting proteins affects OTUD4
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ICP0-interacting proteins ubiquitinates OTUD4. 1 / 1
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reach
"Indeed, we confirmed that both OTUD4 and VIM could be ubiquitinated by ICP0.Our data recapitulated many of the previous reported ICP0-interacting proteins or substrates."
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reach
"In this study, we demonstrated that transient overexpression of RipI induces the hypersensitive response (HR), up-regulating the HR marker gene hin1, in Nicotiana benthamiana."
HTRA4 affects OTUD4
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No evidence text available
HSF2 affects OTUD4
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No evidence text available
HIN2 affects OTUD4
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HIN2 activates OTUD4. 1 / 1
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reach
"The tetrameric HIN2 serves as the central platform for HIN1 to append to and increases the avidity of dsDNA binding of HIN1."
HDAC affects OTUD4
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HDAC increases the amount of OTUD4. 1 / 1
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"We next sought to identify a set of genes whose expression was inhibited by both FR235222 and oxamflatin in a pattern similar to that of their transcriptional inhibition of GATA-1. Using GeneSpring software, this analysis identified 80 genes having a good correlation (R > 0.98) with the repression of GATA-1 gene (Fig. 3 and supplementary data). "
HCM1 affects OTUD4
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HCM1 activates OTUD4. 1 / 1
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reach
"The results showed that HIN1, HSR203J and PR1-a were induced by Hcm1 as by Hpa1, suggesting that the chimeric protein Hcm1, like Hpa1, activates plant defence responses (XREF_FIG)."
H3C6 affects OTUD4
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No evidence text available
GRK5 affects OTUD4
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No evidence text available
GPHN affects OTUD4
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No evidence text available
GLA affects OTUD4
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No evidence text available
GAR1 affects OTUD4
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No evidence text available
GALK1 affects OTUD4
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No evidence text available
G3BP1 affects SMN2
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sparser
"In fact, treatment of lysates with RNase prior to IP reduced or abolished the interaction of OTUD4 with SMN1, HuB and G3BP1, suggesting that OTUD4 binds to these proteins via RNA ( xref C,D,F, right lane of each panel)."
Flag affects OTUD4
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sparser
"OTUD4 was over-expressed by transfection with Flag-OTUD4 plasmid."
FXR2 affects OTUD4
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No evidence text available
FMNL1 affects OTUD4
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No evidence text available
FLNC affects OTUD4
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No evidence text available
FAN1 affects OTUD4
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No evidence text available
EXOSC8 affects OTUD4
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No evidence text available
ELAVL2 affects MYC
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sparser
"We found that endogenous SMN1, FLAG-tagged HuB (also known as ELAVL2) and MycIGF2BP3 interacted with OTUD4 ( xref C–E;)."
ELAVL2 affects G3BP1, OTUD4, and SMN2
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sparser
"In fact, treatment of lysates with RNase prior to IP reduced or abolished the interaction of OTUD4 with SMN1, HuB and G3BP1, suggesting that OTUD4 binds to these proteins via RNA ( xref C,D,F, right lane of each panel)."
DUSP10 affects OTUD4
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No evidence text available
DSG1 affects OTUD4
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No evidence text available
DNMT1 affects NIBAN2, and OTUD4
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sparser
"ChIP, RNA binding protein immunoprecipitation assay and dual-luciferase reporter gene assay were applied to verify interaction between DNMT1 and MEG3, miR-494-3p and MEG3 and OTUD4."
DNAJB1 affects OTUD4
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No evidence text available
DDIT3 affects OTUD4
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DDIT3 decreases the amount of OTUD4. 1 / 1
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No evidence text available
CYLD affects OTUD4
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No evidence text available
CLEC3B affects OTUD4
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No evidence text available
CK2 affects OTUD4
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CK2 phosphorylates OTUD4. 1 / 1
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sparser
"Studies have confirmed that casein kinase II (CK2) induces the phosphorylation of OTUD4 at residues Ser202, which is adjacent to the catalytic OTU domain ( xref )."
BRF2 affects OTUD4
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No evidence text available
BAG5 affects OTUD4
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No evidence text available
ATM affects OTUD4
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ATM phosphorylates OTUD4. 1 / 1
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sparser
"Because K63 polyubiquitination plays pivotal roles in HR repair [ xref ], we propose a hypothesis that OTUD4 might be phosphorylated by ATM and thus function as a K63-specific deubiquitinase to inhibit DSBs HR repair."
ATG12 affects OTUD4
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No evidence text available
ALKBH2 affects OTUD4
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No evidence text available
AGO3 affects OTUD4
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No evidence text available
AGO2 affects OTUD4
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sparser
"The result in Fig.  xref F revealed that compared with IgG group, quantity of miR-494-3p and OTUD4 bound by Ago2 was significantly increased."
5-aza-2-dC affects OTUD4
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5-aza-2-dC increases the amount of OTUD4. 1 / 1
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reach
"These results demonstrated that 5-aza-2-dC may increase the expression of HIN-1 by decreasing the AKT-mTOR expression in paclitaxel resistant OCCC tumor cells."

reach
"Furthermore, AM580 decreases palmitolyation of the surface glycoprotein haemagglutinin of the RNA virus HIN1, thereby impairing replication of influenza59,60."
| PMC
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No evidence text available
| 1

reach
"Highly ABA Induced 1 (HAI1)-Interacting protein HIN1 and drought acclimation enhanced splicing efficiency at intron retention sites."
5-aza-2'-deoxycytidine affects OTUD4
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5-aza-2'-deoxycytidine leads to the demethylation of OTUD4. 1 / 1
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reach
"5-aza-2 '-deoxycytidine reverses HIN-1 methylation and reduces viability of gastric cancer cells."
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No evidence text available
2,4,4'-trichlorobiphenyl increases the amount of OTUD4. 1 / 1
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No evidence text available
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No evidence text available
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No evidence text available
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No evidence text available