IndraLab

Statements


USP16 is modified
54 | 21 15
USP16 is phosphorylated.
54 | 20 15
USP16 is phosphorylated. 10 / 28
| 20 8

sparser
"Knowing that Usp16 regulates the localization of Plk1 on the kinetochores by deubiquitinating Plk1, we wanted to know whether Plk1 positively regulates its own kinetochore localization by phosphorylating and activating Usp16."

rlimsp
"Knowing that Usp16 regulates the localization of Plk1 on the kinetochores by deubiquitinating Plk1, we wanted to know whether Plk1 positively regulates its own kinetochore localization by phosphorylating and activating Usp16."

sparser
"To identify the regulatory elements in the USP16 promotor region, a series of deletion fragments within p USP16 -A was generated (Fig.  xref a)."

sparser
"Collectively, our results strongly suggest that CDK1 promotes the interaction between Plk1 and Usp16 and enhances the phosphorylation of Usp16 by Plk1."

sparser
"CDK1 and Plk1 sequentially phosphorylate and activate Usp16, which in turn deubiquitinates Plk1 to maintain the kinase’s kinetochore localization and promote proper chromosome alignment in mitosis."

rlimsp
"RT-PCR with Usp16 specific primers confirmed equivalent mRNA expression, suggesting that Usp16 phosphorylation promotes protein degradation."

rlimsp
"Importantly, the combined use of CDK1 and Plk1 enhanced the phosphorylation of the peptide aa 150–600 (Fig. 3 B), which is consistent with our early finding that CDK1 is the priming kinase for Plk1 in Usp16 phosphorylation."

sparser
"Plk1 phosphorylates and activates Usp16."

rlimsp
"Next, we set out to investigate the function of Usp16 phosphorylation by Plk1."

sparser
"To determine the functional promoter region of the human USP16 gene, we cloned a 2324 bp 5′ flanking region of the USP16 gene into a promoter-lacking vector pGL4.10 to generate p USP16 -A (− 1856 bp to + 468 bp) plasmid."
USP16 is phosphorylated on S552. 10 / 14
10 | 4

rlimsp
"Therefore, these studies confirm that Ubp-M is phosphorylated at S552 and identify CDK1 as the enzyme responsible for the phosphorylation."

rlimsp
"Future studies will be required to confirm whether TTK-dependent phosphorylation of Usp16 S552 plays a similar role in regulating Plk1 to maintain proper SAC function."

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rlimsp
"Mass spectrometry analysis confirmed Ubp-M is phosphorylated at serine 552, and in vitro and in vivo assays demonstrated that CDK1/cyclin B kinase is responsible for Ubp-M S552P."

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USP16 is phosphorylated on T554. 10 / 14
12 | 2

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USP16 is phosphorylated on S415. 10 / 12
12 |

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USP16 is phosphorylated on S551. 10 / 11
11 |

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USP16 is phosphorylated on T600. 3 / 3
3 |

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USP16 is phosphorylated on T145. 3 / 3
3 |

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USP16 is phosphorylated on T550. 3 / 3
3 |

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USP16 is phosphorylated on S386. 1 / 1
| 1

rlimsp
"By sequence analysis, we found three (S330, S386, and S486) potential Plk1 phosphorylation sites on Usp16 (Fig. S2 C). In vitro phosphorylation of Usp16 with single (S330A, S386A, or S486A) or collective 3A (S330A/S386A/S486A) mutation showed that Plk1 phosphorylated Usp16 at all three sites (Fig. S2 D). MS of peptides derived from proteins isolated from HeLa cells revealed two phosphorylation sites, S330 and S386 (Fig."
USP16 is methylated.
| 1
USP16 is methylated. 1 / 1
| 1

sparser
"According to our findings, USP16 methylation is increased in breast metastatic disease, in agreement with findings in hepatocellular carcinoma [ xref ]."
PLK1 affects USP16
3 4 | 14 20 7
PLK1 phosphorylates USP16.
3 | 6 8 7
PLK1 phosphorylates USP16. 10 / 22
| 6 8 5

rlimsp
"Plk1 phosphorylates and activates Usp16."

sparser
"In vitro phosphorylation of Usp16 with single (S330A, S386A, or S486A) or collective 3A (S330A/S386A/S486A) mutation showed that Plk1 phosphorylated Usp16 at all three sites (Fig. S2 D)."

sparser
"Collectively, our results strongly suggest that CDK1 promotes the interaction between Plk1 and Usp16 and enhances the phosphorylation of Usp16 by Plk1."

sparser
"CDK1 and Plk1 sequentially phosphorylate and activate Usp16, which in turn deubiquitinates Plk1 to maintain the kinase’s kinetochore localization and promote proper chromosome alignment in mitosis."

reach
"Collectively, our results strongly suggest that CDK1 promotes the interaction between Plk1 and Usp16 and enhances the phosphorylation of Usp16 by Plk1."

sparser
"We found that the level of ubiquitinated histone H2A (ubH2A) was high in interphase and low in mitotic HeLa cells (Fig. S3, C–E), suggesting that Plk1 phosphorylates and activates Usp16."

reach
"We found that the level of ubiquitinated histone H2A (ubH2A) was high in interphase and low in mitotic HeLa cells, suggesting that Plk1 phosphorylates and activates Usp16."

rlimsp
"Collectively, our results strongly suggest that CDK1 promotes the interaction between Plk1 and Usp16 and enhances the phosphorylation of Usp16 by Plk1."

reach
"These results strongly suggest that Plk1 phosphorylates and activates Usp16, but the exact molecular mechanism of the activation is not clear at the moment."

sparser
"Plk1 phosphorylates and activates Usp16."
PLK1 phosphorylates USP16 on S486. 3 / 3
1 | 2

No evidence text available

rlimsp
"In vitro phosphorylation of Usp16 with single (S330A, S386A, or S486A) or collective 3A (S330A/S386A/S486A) mutation showed that Plk1 phosphorylated Usp16 at all three sites (Fig."

rlimsp
"By sequence analysis, we found three (S330, S386, and S486) potential Plk1 phosphorylation sites on Usp16 (Fig."
PLK1 phosphorylates USP16 on S330. 1 / 1
1 |

No evidence text available
PLK1 phosphorylates USP16 on S386. 1 / 1
1 |

No evidence text available
PLK1 binds USP16.
4 | 6 7
4 | 6 7

sparser
"Next, we treated HeLa cells with CDK1 inhibitor RO3306 and observed a significant reduction in Plk1Usp16 interaction ( xref )."

sparser
"Because Usp16 interacts with Plk1, we suspected that it might deubiquitinate Plk1."

sparser
"Collectively, our results strongly suggest that CDK1 promotes the interaction between Plk1 and Usp16 and enhances the phosphorylation of Usp16 by Plk1."

reach
"Collectively, our results strongly suggest that CDK1 promotes the interaction between Plk1 and Usp16 and enhances the phosphorylation of Usp16 by Plk1."

sparser
"These data strongly suggest that the phosphorylation of S552 by CDK1 promotes Plk1Usp16 interaction."

No evidence text available

reach
"Recently, CDK1 dependent phosphorylation of Usp16 on S552 was shown to promote an interaction between Usp16 and Plk1."

No evidence text available

sparser
"Because Usp16 is phosphorylated by CDK1 ( xref ; xref ), we speculated that CDK1 might serve as a priming kinase regulating Plk1Usp16 interaction in a way similar to other cases ( xref ; xref )."

reach
"To identify any deubiquitylases that may deubiquitinate Plk1 in early mitosis, we performed reciprocal coimmunoprecipitation (coIP) assays and found that Usp16 specifically interacted with Plk1 in nocodazole arrested prometaphase HeLa cells (XREF_FIG)."
PLK1 activates USP16.
| 2 5
PLK1 activates USP16. 7 / 11
| 2 5

sparser
"We found that the level of ubiquitinated histone H2A (ubH2A) was high in interphase and low in mitotic HeLa cells (Fig. S3, C–E), suggesting that Plk1 phosphorylates and activates Usp16."

sparser
"CDK1 and Plk1 sequentially phosphorylate and activate Usp16, which in turn deubiquitinates Plk1 to maintain the kinase’s kinetochore localization and promote proper chromosome alignment in mitosis."

reach
"Because Usp16 deubiquitinates Plk1, we wondered whether Plk1 mediated Usp16 activation would also enhance the deubiquitination of Plk1 itself."

sparser
"These results suggest that Plk1 activates Usp16, which, in turn, deubiquitinates Plk1 itself."

sparser
"Plk1 phosphorylates and activates Usp16."

reach
"These results suggest that Plk1 activates Usp16, which, in turn, deubiquitinates Plk1 itself."

sparser
"These results strongly suggest that Plk1 phosphorylates and activates Usp16, but the exact molecular mechanism of the activation is not clear at the moment."
USP16 affects PLK1
4 1 | 17 7
USP16 binds PLK1.
4 | 6 7
4 | 6 7

sparser
"Next, we treated HeLa cells with CDK1 inhibitor RO3306 and observed a significant reduction in Plk1Usp16 interaction ( xref )."

sparser
"Because Usp16 interacts with Plk1, we suspected that it might deubiquitinate Plk1."

sparser
"Collectively, our results strongly suggest that CDK1 promotes the interaction between Plk1 and Usp16 and enhances the phosphorylation of Usp16 by Plk1."

reach
"Collectively, our results strongly suggest that CDK1 promotes the interaction between Plk1 and Usp16 and enhances the phosphorylation of Usp16 by Plk1."

sparser
"These data strongly suggest that the phosphorylation of S552 by CDK1 promotes Plk1Usp16 interaction."

No evidence text available

reach
"Recently, CDK1 dependent phosphorylation of Usp16 on S552 was shown to promote an interaction between Usp16 and Plk1."

No evidence text available

sparser
"Because Usp16 is phosphorylated by CDK1 ( xref ; xref ), we speculated that CDK1 might serve as a priming kinase regulating Plk1Usp16 interaction in a way similar to other cases ( xref ; xref )."

reach
"To identify any deubiquitylases that may deubiquitinate Plk1 in early mitosis, we performed reciprocal coimmunoprecipitation (coIP) assays and found that Usp16 specifically interacted with Plk1 in nocodazole arrested prometaphase HeLa cells (XREF_FIG)."
USP16 deubiquitinates PLK1.
1 | 7
USP16 deubiquitinates PLK1. 8 / 8
1 | 7

"ubiquitinspecific peptidase 16 (Usp16) was identified as a PLK1 interacting protein in a co-immunoprecipitation (co-IP) assay in a PBD-dependent manner"

reach
"In this study, we show that ubiquitin specific peptidase 16 (Usp16) is a novel substrate for Plk1, and sequential phosphorylation by CDK1 and Plk1 activates Usp16, which, in turn, deubiquitinates Plk1 and promotes the recruitment of Plk1 to, and its retention on, the kinetochores for proper chromosome alignment."

reach
"Collectively, these results suggest that Plk1 is ubiquitinated by CUL3 based ubiquitin ligase in vivo, and the ubiquitination of Plk1 could be reversed by Usp16, which interacts with Plk1 in a PBD dependent manner in early mitosis."

reach
"Usp16 interacts with and deubiquitinates Plk1."

reach
"Because Usp16 deubiquitinates Plk1, we wondered whether Plk1 mediated Usp16 activation would also enhance the deubiquitination of Plk1 itself."

reach
"When Usp16 was knocked down by siRNA, we found that the ladder pattern bands above the main Plk1 band were enhanced, confirming our previous speculation that Usp16 might deubiquitinate Plk1 (XREF_FIG)."

reach
"CDK1 and Plk1 sequentially phosphorylate and activate Usp16, which in turn deubiquitinates Plk1 to maintain the kinase 's kinetochore localization and promote proper chromosome alignment in mitosis."

reach
"Usp16 deubiquitinates Plk1, resulting in an enhanced interaction with kinetochore localized proteins such as BubR1, and thereby retains Plk1 on the kinetochores to promote proper chromosome alignment in early mitosis."
USP16 activates PLK1.
| 1
USP16 activates PLK1. 1 / 4
| 1

reach
"Thus, our data unveil a unique mechanism by which Usp16 promotes the localization and maintenance of Plk1 on the kinetochores for proper chromosome alignment."
USP16 increases the amount of PLK1.
| 3
USP16 increases the amount of PLK1. 3 / 3
| 3

reach
"We found that, whereas the kinetochore localization of BubR1 was unchanged in both the control and Usp16 knockdown HeLa cells, knockdown of Usp16 in the cells reduced the amount of Plk1 localized on the kinetochores (XREF_FIG) and the binding between Plk1 and BubR1 (XREF_FIG)."

reach
"It was found that the WT and 3E, but not 3A, Usp16 could restore the level of kinetochore localized Plk1, which was initially reduced by Usp16 knockdown (XREF_FIG)."

reach
"Because the kinetochore localization of Plk1 is necessary for kinetochore-microtubule attachment and subsequent chromosome alignment, we speculated that suppression of Usp16, i.e., reducing the amount of Plk1 on the kinetochores, would delay the chromosome alignment and anaphase onset."
CDK1 affects USP16
1 2 2 1 | 3 4 2
CDK1 phosphorylates USP16.
1 1 | 3 3 2
CDK1 phosphorylates USP16 on S552. 5 / 5
1 1 | 1 2

reach
"Recently, CDK1 dependent phosphorylation of Usp16 on S552 was shown to promote an interaction between Usp16 and Plk1."

No evidence text available

rlimsp
"Ubp-M serine 552 phosphorylation by cyclin-dependent kinase 1 regulates cell cycle progression."

rlimsp
"Here, we report that cyclin-dependent kinase 1 (CDK1) phosphorylates the histone H2A deubiquitinase Ubp-M at serine 552 (S552P), and, importantly, this phosphorylation is required for cell cycle progression."

"Here, we report that cyclin-dependent kinase 1 (cdk1) phosphorylates the histone h2a deubiquitinase ubp-m at serine 552 (s552p), and, importantly, this phosphorylation is required for cell cycle progression."
CDK1 phosphorylates USP16. 5 / 5
| 2 3

reach
"Cdk1 phosphorylates Usp16 and enhances its binding to Plk1."

sparser
"Because Usp16 is phosphorylated by CDK1 ( xref ; xref ), we speculated that CDK1 might serve as a priming kinase regulating Plk1–Usp16 interaction in a way similar to other cases ( xref ; xref )."

reach
"Because Usp16 is phosphorylated by CDK1, we speculated that CDK1 might serve as a priming kinase regulating Plk1-Usp16 interaction in a way similar to other cases."

sparser
"CDK1 and Plk1 sequentially phosphorylate and activate Usp16, which in turn deubiquitinates Plk1 to maintain the kinase’s kinetochore localization and promote proper chromosome alignment in mitosis."

sparser
"Cdk1 phosphorylates Usp16 and enhances its binding to Plk1."
CDK1 activates USP16.
1 | 1
CDK1 activates USP16. 2 / 5
1 | 1

"Here, we report that cyclin-dependent kinase 1 (cdk1) phosphorylates the histone h2a deubiquitinase ubp-m at serine 552 (s552p), and, importantly, this phosphorylation is required for cell cycle progression."

sparser
"CDK1 and Plk1 sequentially phosphorylate and activate Usp16, which in turn deubiquitinates Plk1 to maintain the kinase’s kinetochore localization and promote proper chromosome alignment in mitosis."
CDK1 binds USP16.
2 1 |
2 1 |

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USP16 affects IKBKB
| 10 7
USP16 binds IKBKB.
| 7 7
| 7 4

reach
"Depletion of the NBD disrupted the interaction of USP16 with both IKKbeta and IKKalpha (XREF_FIG), which further suggests that USP16 and NEMO may competitively bind to IKKbeta and IKKalpha."
| PMC

reach
"Co-IP indicated that the UBP14 domain is indispensable for USP16 binding to IKKbeta (XREF_FIG)."
| PMC

sparser
"Under TNF-α stimulation, coimmunoprecipitation (co-IP) assays demonstrated that USP16 physically associated with IKKβ but not with p105 or IκBα in cotransfected HEK293T cells ( xref )."
| PMC

reach
"Under TNF-alpha stimulation, coimmunoprecipitation (co-IP) assays demonstrated that USP16 physically associated with IKKbeta but not with p105 or IkappaBalpha in cotransfected HEK293T cells (XREF_FIG)."
| PMC

reach
"In transfected HEK293T cells, the results of co-IP revealed that the association between IKKbeta and USP16 was dependent on the NBD of IKKbeta (XREF_FIG)."
| PMC

reach
"USP16 selectively interacts with IKKbeta and IKKalpha."
| PMC

reach
"To further confirm the interaction between endogenous USP16 and IKKbeta, we generated USP16 fl mice and crossed them with Lyz2-Cre mice to delete USP16 in myeloid cells, producing myeloid cell specific USP16-KO (USP16 MKO) mice."
| PMC

sparser
"Co-IP indicated that the UBP14 domain is indispensable for USP16 binding to IKKβ ( xref )."
| PMC

reach
"By comparison with NEMO, we identified five conserved amino acids that are important for binding between USP16 and IKKbeta, as suggested by the disappearance of the signal upon deletion of the sequence (XREF_FIG)."
| PMC

sparser
"To further confirm the interaction between endogenous USP16 and IKKβ, we generated USP16 fl mice and crossed them with Lyz2 -Cre mice to delete USP16 in myeloid cells, producing myeloid cell–specific USP16-KO (USP16 MKO ) mice (fig."
| PMC
USP16 binds CHUK and IKBKB. 2 / 2
| 2

sparser
"USP16 selectively interacts with IKKβ and IKKα."
| PMC

sparser
"Depletion of the NBD disrupted the interaction of USP16 with both IKKβ and IKKα ( xref ), which further suggests that USP16 and NEMO may competitively bind to IKKβ and IKKα."
| PMC
| 1

sparser
"Depletion of the NBD disrupted the interaction of USP16 with both IKKβ and IKKα ( xref ), which further suggests that USP16 and NEMO may competitively bind to IKKβ and IKKα."
| PMC
USP16 ubiquitinates IKBKB.
| 1
USP16 leads to the ubiquitination of IKBKB. 1 / 1
| 1

reach
"These data establish USP16 and USP16 mediated IKKbeta ubiquitination as a novel regulatory mechanism of NF-kappaB signaling and intestinal tumorigenesis and suggest an important role of USP16 in colitis related CRC pathogenesis."
| PMC
USP16 phosphorylates IKBKB.
| 1
USP16 leads to the phosphorylation of IKBKB. 1 / 1
| 1

reach
"This observation raised a critical question regarding whether USP16 directly regulates IKKbeta activity or p105 phosphorylation."
| PMC
USP16 activates IKBKB.
| 1
USP16 activates IKBKB. 1 / 1
| 1

reach
"USP16 mediated DUB of IKKbeta directly, while the USP16 CI mutant lost its ability to regulate IKKbeta ubiquitination, as suggested by in vitro DUB assays (XREF_FIG)."
| PMC
USP16 affects MYC
| 10 3
USP16 binds MYC.
| 2 3
| 2 2

sparser
"The interaction between endogenous c-Myc and USP16 was also demonstrated in PC3 cells (Fig. xref e)."

sparser
"The interaction between USP16 and c-Myc protein was assessed by co-immunoprecipitation and protein co-localization assays."

reach
"The interaction between endogenous c-Myc and USP16 was also demonstrated in PC3 cells."

reach
"To further assess the association between USP16 and c-Myc in PCa, we detected the expression of USP16 and c-Myc using tissue microarrays containing 82 human PCa tissues."
USP16 binds MYC and Flag. 1 / 1
| 1

sparser
"To identify whether USP16 serves as a DUB of c-Myc, HEK293T cells were transfected with plasmids encoding HA-ubiquitin and Flag-c-Myc with wild-type USP16 or its catalytically inactive mutant USP16-C205S and treated with MG132."
USP16 activates MYC.
| 4
USP16 activates MYC. 2 / 2
| 2

reach
"We found that knockdown of USP16 dramatically reduced c-Myc protein abundance but did not affect its mRNA levels, suggesting that the regulation of c-Myc by USP16 occurs at the post-transcriptional level."

reach
"We found that ectopic expression of USP16 enhanced the stability of c-Myc protein, while USP16 knockdown reduced the half-life of c-Myc protein."
USP16 activates MYC. 2 / 2
| 2

reach
"In addition, knockdown of USP16 significantly reduced c-Myc abundance at the post-translational level, while overexpression of wild-type USP16, instead of its catalytic inactive mutant (C205S) [XREF_BIBR], stabilized c-Myc."

reach
"Analysis of c-Myc protein levels by Western blot revealed that knockdown of USP16 significantly decreased the abundance of c-Myc."
USP16 deubiquitinates MYC.
| 2
USP16 deubiquitinates MYC. 2 / 2
| 2

reach
"USP16 deubiquitinates c-Myc."

reach
"Besides, the knockdown of USP16 significantly enhanced the polyubiquitination of c-Myc."
USP16 ubiquitinates MYC.
| 1
USP16 leads to the ubiquitination of MYC. 1 / 1
| 1

reach
"XREF_FIG g, the wild-type USP16, but not USP16-C205S, markedly reduced the ubiquitination of c-Myc."
USP16 decreases the amount of MYC.
| 1
USP16 decreases the amount of MYC. 1 / 1
| 1

reach
"In the present study, we found that the targeted disruption of USP16, but not other deubiquitinases of c-Myc, reduced c-Myc protein levels in PCa, indicating that DUBs have different functions in different cancers."
HERC2 affects USP16
4 | 4 4
HERC2 binds USP16.
4 | 3 4
4 | 3 4

reach
"The histone H2A deubiquitinase USP16 interacts with HERC2 and fine-tunes cellular response to DNA damage."

No evidence text available

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sparser
"This mechanism may explain the evolution of the USP16-HERC2 interaction ( xref , xref , xref online): the USP16 coil-coiled interaction domain at ∼200 a."

No evidence text available

sparser
"USP16 interacts with HERC2 and modulates the ubiquitination in DNA repair machinery components ( xref )."

sparser
"Here we report that the histone H2A deubiquitinase USP16 interacts with HERC2, fine-tunes the ubiquitin signal during repair, and importantly, is required for terminating the ubiquitination signal after repair."

reach
"USP16 interacts with HERC2 and modulates the ubiquitination in DNA repair machinery components."

reach
"Here we report that the histone H2A deubiquitinase USP16 interacts with HERC2, fine-tunes the ubiquitin signal during repair, and importantly, is required for terminating the ubiquitination signal after repair."
HERC2 increases the amount of USP16.
| 1
HERC2 increases the amount of USP16. 1 / 1
| 1

reach
"In response to DNA damage, the HECT and RLD domain containing E3 ubiquitin protein ligase 2 (HERC2)-dependent increase in the level of USP16 negatively regulates ubiquitin foci formation by H2AK119Ub and K15Ub."
| PMC
USP16 affects NFKB1
| 1 7 3
USP16 phosphorylates NFKB1.
| 5 3
USP16 leads to the phosphorylation of NFKB1. 8 / 8
| 5 3

sparser
"USP16 specifically promotes p105 phosphorylation."
| PMC

sparser
"USP16 specifically promotes p105 phosphorylation."
| PMC

reach
"In these reconstituted USP16 -/- fibroblasts, USP16 WT, but not USP16 CI, rescued the phosphorylation of p105 and the interaction between IKKbeta and p105 (XREF_FIG)."
| PMC

reach
"Collectively, these data indicated that the USP16 mediated deubiquitination of IKKbeta may be specifically involved in the phosphorylation and processing of p105."
| PMC

sparser
"USP16 specifically promotes p105 phosphorylation."
| PMC

reach
"This observation raised a critical question regarding whether USP16 directly regulates IKKbeta activity or p105 phosphorylation."
| PMC

reach
"USP16 specifically promotes p105 phosphorylation."
| PMC

reach
"With IKKbeta K238R, USP16 silencing no longer impaired the phosphorylation of p105."
| PMC
USP16 inhibits NFKB1.
| 2
USP16 inhibits NFKB1. 2 / 2
| 2

reach
"USP16 deficiency strongly inhibited the activation of p105 by the typical IKK complex under LPS stimulation, as revealed by an in vitro kinase assay (XREF_FIG)."
| PMC

reach
"We further demonstrated that loss of USP16 specifically causes inactivation of p105 in both BMDMs and MEFs, as indicated by low phosphorylation levels of p105 and low nuclear translocation of p50."
| PMC
USP16 activates NFKB1.
| 1
USP16 activates NFKB1. 1 / 1
| 1

eidos
"We further demonstrated that loss of USP16 specifically causes inactivation of p105 in both BMDMs and MEFs , as indicated by low phosphorylation levels of p105 and low nuclear translocation of p50 ."
| PMC
USP16 affects HERC2
4 | 3 4
4 | 3 4

reach
"The histone H2A deubiquitinase USP16 interacts with HERC2 and fine-tunes cellular response to DNA damage."

No evidence text available

No evidence text available

No evidence text available

sparser
"This mechanism may explain the evolution of the USP16-HERC2 interaction ( xref , xref , xref online): the USP16 coil-coiled interaction domain at ∼200 a."

No evidence text available

sparser
"USP16 interacts with HERC2 and modulates the ubiquitination in DNA repair machinery components ( xref )."

sparser
"Here we report that the histone H2A deubiquitinase USP16 interacts with HERC2, fine-tunes the ubiquitin signal during repair, and importantly, is required for terminating the ubiquitination signal after repair."

reach
"USP16 interacts with HERC2 and modulates the ubiquitination in DNA repair machinery components."

reach
"Here we report that the histone H2A deubiquitinase USP16 interacts with HERC2, fine-tunes the ubiquitin signal during repair, and importantly, is required for terminating the ubiquitination signal after repair."
TTK affects USP16
3 | 4 4
TTK phosphorylates USP16. 6 / 6
| 3 3

reach
"We also found that TTK phosphorylates and regulates the protein stability of Usp16, an enzyme required to promote chromosomal condensation, suggesting that TTK functions at multiple stages of the cell cycle to maintain genome stability."

rlimsp
"These results indicate that Usp16 is directly phosphorylated by TTK in vitro."

reach
"TTK dependent phosphorylation of Usp16 causes protein degradation."

rlimsp
"We also found that TTK phosphorylates and regulates the protein stability of Usp16, an enzyme required to promote chromosomal condensation, suggesting that TTK functions at multiple stages of the cell cycle to maintain genome stability."

rlimsp
"We next sought to identify the TTK dependent phosphorylation sites on Usp16 by performing mass spectrometry."

reach
"These results indicate that Usp16 is directly phosphorylated by TTK in vitro."
TTK phosphorylates USP16 on S552. 2 / 2
1 | 1

reach
"Future studies will be required to confirm whether TTK dependent phosphorylation of Usp16 S552 plays a similar role in regulating Plk1 to maintain proper SAC function."

No evidence text available
TTK phosphorylates USP16 on S415. 2 / 2
1 | 1

rlimsp
"Analysis of the resulting spectra identified three TTK-dependent phosphorylation sites within Usp16: S415, S552, T554 (Fig 5B)."

No evidence text available
TTK phosphorylates USP16 on T554. 1 / 1
1 |

No evidence text available
USP16 affects CHUK
| 3 5
| 3 1

reach
"Unexpectedly, USP16 could also associate with IKKalpha, but no signal of its binding to NEMO was detected (XREF_FIG)."
| PMC

sparser
"Unexpectedly, USP16 could also associate with IKKα, but no signal of its binding to NEMO was detected ( xref )."
| PMC

reach
"Depletion of the NBD disrupted the interaction of USP16 with both IKKbeta and IKKalpha (XREF_FIG), which further suggests that USP16 and NEMO may competitively bind to IKKbeta and IKKalpha."
| PMC

reach
"USP16 selectively interacts with IKKbeta and IKKalpha."
| PMC
USP16 binds CHUK and IKBKB. 2 / 2
| 2

sparser
"USP16 selectively interacts with IKKβ and IKKα."
| PMC

sparser
"Depletion of the NBD disrupted the interaction of USP16 with both IKKβ and IKKα ( xref ), which further suggests that USP16 and NEMO may competitively bind to IKKβ and IKKα."
| PMC
| 1

sparser
"Depletion of the NBD disrupted the interaction of USP16 with both IKKβ and IKKα ( xref ), which further suggests that USP16 and NEMO may competitively bind to IKKβ and IKKα."
| PMC
USP16 binds CHUK and IKBKG. 1 / 1
| 1

sparser
"IKKα and IKKβ contain similar functional domains; thus, we further evaluated the interaction of USP16 with IKKα and NEMO."
| PMC
USP16 affects CDKN2A
| 1 4 3
USP16 activates CDKN2A.
| 1 2 1
USP16 activates CDKN2A. 4 / 4
| 1 2 1

reach
"Modulation of Ink4a and Arf by Usp16 in Ts65Dn cells."

sparser
"USP16 activates Cdkn2a, which acts as a negative regulator of the Wnt signalling pathway."

eidos
"USP16 activates Cdkn2a , which acts as a negative regulator of the Wnt signalling pathway ."

reach
"USP16 activates Cdkn2a, which acts as a negative regulator of the Wnt signalling pathway."
USP16 binds CDKN2A.
| 2
| 2

sparser
"In addition, Usp16 is associated with decreased ubiquitination of Cdkn2a and accelerated senescence in Ts65Dn fibroblasts."

sparser
"Moreover, Usp16 is associated with decreased ubiquitination of Cdkn2a and accelerated senescence in Ts65Dn fibroblasts."
USP16 increases the amount of CDKN2A.
| 1
Modified USP16 increases the amount of CDKN2A. 1 / 1
| 1

reach
"In Ts65Dn satellite cells, Usp16 expression is increased but we found no evidence of increased p16 Ink4a expression (data not shown)."
USP16 decreases the amount of CDKN2A.
| 1
USP16 decreases the amount of CDKN2A. 1 / 1
| 1

reach
"However, lentiviral downregulation of Usp16 with two different hairpins decreased p16 Ink4a and p19 Arf expression (XREF_FIG)."
MYC affects USP16
| 5 3
MYC binds USP16.
| 2 3
| 2 2

sparser
"The interaction between endogenous c-Myc and USP16 was also demonstrated in PC3 cells (Fig. xref e)."

sparser
"The interaction between USP16 and c-Myc protein was assessed by co-immunoprecipitation and protein co-localization assays."

reach
"The interaction between endogenous c-Myc and USP16 was also demonstrated in PC3 cells."

reach
"To further assess the association between USP16 and c-Myc in PCa, we detected the expression of USP16 and c-Myc using tissue microarrays containing 82 human PCa tissues."
USP16 binds MYC and Flag. 1 / 1
| 1

sparser
"To identify whether USP16 serves as a DUB of c-Myc, HEK293T cells were transfected with plasmids encoding HA-ubiquitin and Flag-c-Myc with wild-type USP16 or its catalytically inactive mutant USP16-C205S and treated with MG132."
MYC inhibits USP16.
| 1
MYC inhibits USP16. 1 / 1
| 1

reach
"Co-immunoprecipitation and ubiquitination assays confirmed that USP16 served as a novel deubiquitinase of c-Myc and overexpression of c-Myc significantly rescued the effects of USP16 disruption."
MYC increases the amount of USP16.
| 1
MYC increases the amount of USP16. 1 / 1
| 1

reach
"Besides, it remains to explore whether c-Myc signalling could activate USP16 expression, resulting in a positive feedback loop that further promotes tumourigenesis."
MYC activates USP16.
| 1
MYC activates USP16. 1 / 1
| 1

reach
"Moreover, c-Myc overexpression restored the proliferation and colony formation abilities of USP16 silenced cells."
CHUK affects USP16
| 3 5
| 3 1

reach
"Unexpectedly, USP16 could also associate with IKKalpha, but no signal of its binding to NEMO was detected (XREF_FIG)."
| PMC

sparser
"Unexpectedly, USP16 could also associate with IKKα, but no signal of its binding to NEMO was detected ( xref )."
| PMC

reach
"Depletion of the NBD disrupted the interaction of USP16 with both IKKbeta and IKKalpha (XREF_FIG), which further suggests that USP16 and NEMO may competitively bind to IKKbeta and IKKalpha."
| PMC

reach
"USP16 selectively interacts with IKKbeta and IKKalpha."
| PMC
USP16 binds CHUK and IKBKB. 2 / 2
| 2

sparser
"USP16 selectively interacts with IKKβ and IKKα."
| PMC

sparser
"Depletion of the NBD disrupted the interaction of USP16 with both IKKβ and IKKα ( xref ), which further suggests that USP16 and NEMO may competitively bind to IKKβ and IKKα."
| PMC
| 1

sparser
"Depletion of the NBD disrupted the interaction of USP16 with both IKKβ and IKKα ( xref ), which further suggests that USP16 and NEMO may competitively bind to IKKβ and IKKα."
| PMC
USP16 binds CHUK and IKBKG. 1 / 1
| 1

sparser
"IKKα and IKKβ contain similar functional domains; thus, we further evaluated the interaction of USP16 with IKKα and NEMO."
| PMC

sparser
"MYSM1 and USP16 activate transcription."

sparser
"USP16 activates transcription of HOX genes in a manner consistent with reversing the repressive activity of the Polycomb complex."

reach
"A deubiquitylation enzyme, USP16, negatively regulates uH2A dependent function and rapidly restores transcription after the cessation of DNA damage."

reach
"Similar data were obtained with three separate siRNAs directed against USP16, while expression of a siRNA resistant USP16 allele restored transcription after ATMi (XREF_SUPPLEMENTARY)."

reach
"MYSM1 and USP16 activate transcription."

reach
"USP16 depletion could prevent ATMi mediated restoration of transcription, indicating that this DUB is responsible for de-ubiquitylation of uH2A at DSBs."
USP16 affects oxalate(1-)
| 2 4
USP16 decreases the amount of oxalate(1-).
| 2
USP16 decreases the amount of oxalate(1-). 2 / 2
| 2

reach
"Given that previous studies indicate that H2A ubiquitination regulates Hox gene silencing, it is possible that Usp16 may repress Hox gene expression by modulating the levels of uH2A at the promoter and 5 ' end regulatory region of the Hox gene Finally, there is recent evidence that, in addition to a role in silencing, uH2A may also control transcriptional initiation."

reach
"Knockdown of Usp16 causes a decrease in Hox expression and the rescue from this defect requires the deubiquitinating activity of Usp16."
USP16 activates oxalate(1-).
| 1 1
| 1 1

eidos
"Knockdown of Usp16 causes a decrease in Hox expression and the rescue from this defect requires the deubiquitinating activity of Usp16 ."

reach
"The in vivo relevance of Ubp-M mediated Hox gene activation was suggested by the observation that injection of Ubp-M antibodies in Xenopus embryos led to deregulation of HoxD10 expression and defects in posterior development."
USP16 inhibits oxalate(1-).
| 1
| 1

eidos
"Given that previous studies indicate that H2A ubiquitination regulates Hox gene silencing , it is possible that Usp16 may repress Hox gene expression by modulating the levels of uH2A at the promoter and 5 ' end regulatory region of the Hox gene ( 83 , 153 , 174 , 175 ) Finally , there is recent evidence that , in addition to a role in silencing , uH2A may also control transcriptional initiation ."
USP16 increases the amount of oxalate(1-).
| 1
USP16 increases the amount of oxalate(1-). 1 / 1
| 1

reach
"USP16 activates transcription of HOX genes in a manner consistent with reversing the repressive activity of the Polycomb complex."
| 4

reach
"Moreover, Usp16 is associated with decreased ubiquitination of Cdkn2a and accelerated senescence in Ts65Dn fibroblasts."

reach
"Collectively, USP11 has been clearly linked to essential DDR mechanisms and oncogene-induced senescence, highlighting it as a potentially attractive target for therapeutic agents.In a similar manner to USP3, USP16 has been characterised as an enzyme removing ubiquitin from histone H2A and involved in regulating the RNF8-RNF168 pathway [118] ."

reach
"In hematopoietic stem cells, Usp16 over expression prematurely induces senescence via p16 Ink4a expression 10."

reach
"In addition, Usp16 is associated with decreased ubiquitination of Cdkn2a and accelerated senescence in Ts65Dn fibroblasts."
| 2

reach
"The deubiquitinating enzyme USP16 suppresses self-renewal and senescence pathways in multiple tissues via deubiquitinating H2AK119 and increasing Ink4a locus transcription [XREF_BIBR], while BMI-1 regulates cell cycle, apoptosis and senescence via inhibiting p16 Ink4a and p19 Arf genes encoded by Ink4a [XREF_BIBR, XREF_BIBR]."

reach
"In this way, USP16 antagonizes the self-renewal and senescence pathways in multiple tissues."
USP16 affects cell growth
| 6
USP16 activates cell growth.
| 4
| 4

reach
"Cells proliferation were then analysed using a CCK-8 assay, and the results revealed that knockdown of USP16 markedly reduced cell growth in PCa cells."

reach
"Indeed a knockdown of USP16 or an over-expression of its catalytically inactive form slow down cell growth and interfere with mitosis, suggesting that USP16 is the H2A-DUB responsible for histone H2A [MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

reach
"These results demonstrate that inhibiting USP16 significantly suppressed PCa cell growth in vivo."

reach
"Depletion of USP16 significantly increased the cell growth rate and inhibited cell anoikis in vitro (XREF_FIG and XREF_SUPPLEMENTARY)."
USP16 inhibits cell growth.
| 2
| 2

reach
"Downregulation of USP16 markedly suppressed PCa cell growth both in vitro and in vivo."

reach
"In addition, USP16 overexpression in normal human fibroblasts and neural progenitors led to reduced cell expansion 159 , which was similar to the strong proliferation defects observed in fibroblasts from individuals with Down syndrome 160 ."
USP16 affects Wnt
| 2 3 1
USP16 activates Wnt.
| 2 3
USP16 activates Wnt. 5 / 5
| 2 3

eidos
"Discussion Our data show that Bmi1 and Usp16 , important chromatin regulators in stem cells , modulate Wnt signaling in primary mammary epithelial and fibroblast cells ."

reach
"Here we report that Usp16, a negative regulator of Bmi1 and PRC1 function, modulates the Wnt pathway in mammary epithelia, primary human fibroblasts and MEFs, affecting their expansion and self-renewal potential."

eidos
"Usp16 modulates Wnt signaling in primary tissues through Cdkn2a regulation Regulation of the Wnt pathway in stem cells and primary tissues is still poorly understood ."

reach
"Usp16 copy number normalization restores normal Wnt activation in Ts65Dn mice models."

reach
"Usp16 modulates Wnt signaling in primary tissues through Cdkn2a regulation."
USP16 binds Wnt.
| 1
| 1

sparser
"Finally, because of the high prevalence and early appearance of AD in the DS population and the multiple common mechanisms found in both conditions, DS can be considered a useful model to study AD etiopathology and to search for new therapeutic strategies. [188, 191] ↑ in DS and AD Enhancement of lipid, DNA, and RNA oxidation Glutamatergic system [189, 190] ↑ in AD Promotion of OS-induced excitotoxicity Cholinergic system [191] ↓ in DS and AD Aβ-induced enhancement of OS in cholinergic neurons mTOR [192] [193] [194] 196, 198] ↑ in DS and AD OS disruption of mTOR function and mTOR enhancement of oxidative damage Enhanced oxidative stress [191, 200, 201] ↑ in DS and AD Enhancement of ROS-mediated disruption of mitochondrial integrity and function OXPHOS [203] [204] [205] [206] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] ↓ in DS and AD Enhancement of Aβ production, alterations in cell membranes and synapses, reduction in mitochondrial inner membrane potential, reduction in energy production, and lower mitochondrial function Raptor/mTOR [197, 223, 224] ↑ in DS and AD Alterations in mitochondrial activity and metabolism Insulin signaling [241] [242] [243] ↓ in DS and AD Alterations in energy metabolism, impairment of neuronal activity, plasticity and survival, and facilitation of Aβ aggregation Glucose transport and metabolism [245] [246] [247] [248] [249] [250] ↓ in DS and AD Reduction in energy for synaptic transmission and neurotransmitter biosynthesis, alterations in autophagy PI3-K/Akt/mTOR [65, 67, [253] [254] [255] [256] ↑ in DS and AD Dysregulation of energy balance, induction of insulin resistance, altered autophagy Release of proinflammatory cytokines [269, 270] ↑ in DS and AD Induction of cellular senescence and enhancement by senescence Oxidative stress and mitochondrial dysfunction [15, 262] ↑ in DS and AD Induction of cellular senescence and enhancement by senescence Proteostasis (Aβ and tau) [267, 268] ↑ in DS and AD Induction of cellular senescence and enhancement by senescence, induction of cellular senescence and enhancement by senescence USP16-Wnt [271] [272] [273] ↑ UPS16 in DS/ ↓ Wnt in DS and AD Induction of senescence through DNA damage, downregulation of the Wnt pathway reducing stem cell renewal p38MAPK [281] [282] [283] [284] [285] ↑ in DS and AD Increase in release of cytokines Aβ/APP [287, 290] ↑ in DS and AD Increase in release of cytokines which further aggravates Aβ pathology HPA [292, 293] ↑ in AD Cytokines produce excessive activation of the HPA, which aggravates the energy deficits and enhances OS Inhibition of proliferation and promotion of premature differentiation, prevention the entry into the S phase of the cycle DYRK1A/Notch [312] [313] [314] Inhibition of notch signaling that controls neurogenesis, induction of a shift from neurogenic to glionenic fate of progenitors DYRK1A/NFAT [316] Delay of neurogenesis by the synergic effect with RCAN1 mTOR [317, 318] ↑ in DS and AD Apoptotic death of NPCs BDNF [92, 322] ↓ in DS and AD Impairment of cell proliferation and differentiation Shh [323] [324] [325] ↓ in DS Impairment of proliferation of NPCs •AD, in individuals with or without DS, is a disease with a complex set of neuropathological signs. •Numerous signalling pathways are implicated in the onset and aggravation of this neuropathology. •The same signalling pathway often plays a role in the appearance or progression of different signs of AD. •In many cases, synergic effects and feedback loops exist between these pathways. •Because of the complex etiopathology of AD and the interrelation between the factors responsible for the symptoms of the disease, therapeutic approaches should combine different targets. • AD, in individuals with or without DS, is a disease with a complex set of neuropathological signs."

reach
"Furthermore, in human tissues overexpression of USP16 reduces the expansion of normal fibroblasts and postnatal neural progenitors, whereas downregulation of USP16 partially rescues the proliferation defects of Down 's syndrome fibroblasts."

reach
"Concordantly, we found that ectopic expression of USP16 mostly restored the proliferation rate of USP16 knockdown cells."

reach
"Furthermore, in human tissues overexpression of USP16 reduces the expansion of normal fibroblasts and post-natal neural progenitors while downregulation of USP16 partially rescues the proliferation defects of DS fibroblasts."

reach
"USP16 is upregulated in Down 's syndrome (DS) cells due to extrachromosomal triplication in trisomy 21, downregulation of USP16 partially restores the impaired proliferation in DS somatic stem cells."

eidos
"These results were further confirmed by the fact that depleting USP16 promoted cell proliferation in Hs683 and SW1783 cells ( fig ."

reach
"When ESCs are differentiated, Usp16 is required to reverse ubH2A mediated gene repression and enables gene activation and subsequent ESC differentiation."

reach
"Usp16 regulates H2A deubiquitination and modulates self-renewal and differentiation in different types of cells."

reach
"Finally, Usp16, but not a catalytically inactive mutant, rescues the differentiation defects of Usp16 -/- ESCs."

reach
"Wild-type Usp16 rescues Usp16 -/- ESC differentiation defect."

reach
"Finally, we demonstrate that Usp16, but not the enzymatically inactive mutant, rescues the differentiation defects of Usp16 -/- ESCs."
USP16 affects UBC
5 |
5 |

No evidence text available

No evidence text available

No evidence text available

No evidence text available

No evidence text available
USP16 affects ubH2A
| 1 3
USP16 inhibits ubH2A.
| 1 1
USP16 inhibits ubH2A. 2 / 2
| 1 1

eidos
"In contrast to observations in ESCs and HSCs , USP16 deficiency did not increase ubH2A levels ( fig ."
| PMC

reach
"When ESCs are differentiated, Usp16 is required to reverse ubH2A mediated gene repression and enables gene activation and subsequent ESC differentiation."
USP16 increases the amount of ubH2A.
| 1
USP16 increases the amount of ubH2A. 1 / 1
| 1

reach
"In contrast to observations in ESCs and HSCs, USP16 deficiency did not increase ubH2A levels."
| PMC
USP16 decreases the amount of ubH2A.
| 1
USP16 decreases the amount of ubH2A. 1 / 1
| 1

reach
"Supporting our biochemical assays, Usp16 knockout caused a significant increase of ubH2A levels without any apparent effects on H2A levels (XREF_FIG)."

reach
"Depletion of USP16 was shown to significantly suppress the growth of PCa cells both in vitro and in vivo."

reach
"Downregulation of USP16 markedly suppressed PCa cell growth both in vitro and in vivo."

reach
"USP16 knockdown suppresses growth of PCa tumour xenografts."

reach
"These results demonstrate that inhibiting USP16 significantly suppressed PCa cell growth in vivo."
USP16 affects NFkappaB
| 3 1
USP16 activates NFkappaB.
| 2
| 2

reach
"This result indicates a clear pivotal effect of myeloid USP16 mediated canonical NF-kappaB in experimental colitis model establishment and CRC development."
| PMC

reach
"In addition, transfection of USP16 WT, but not USP16 CI, increased TNF-alpha-induced NF-kappaB activity in HEK293T cells, as demonstrated by NF-kappaB luciferase reporter assays (XREF_FIG and fig."
| PMC
USP16 inhibits NFkappaB.
| 1
| 1

reach
"Notably, USP16 deficiency greatly impaired the activation of NF-kappaB induced by TNF-alpha (XREF_FIG)."
| PMC
USP16 binds NFkappaB.
| 1
NFkappaB binds USP16. 1 / 1
| 1

isi
"Three bona fide NFkappaB binding sites were found in USP16 promoter."
USP16 affects H2AC20
2 1 | 1
USP16 binds H2AC20.
2 | 1
2 |

No evidence text available

No evidence text available
| 1

sparser
"Both USP3 and USP16 are also associated with H2A deubiquitination following DNA damage processing [ xref , xref ]."
USP16 deubiquitinates H2AC20.
1 |
USP16 deubiquitinates H2AC20. 1 / 1
1 |

No evidence text available
USP16 affects RNF8
2 | 1
USP16 binds RNF8.
2 |
2 |

No evidence text available

No evidence text available
USP16 activates RNF8.
| 1
USP16 activates RNF8. 1 / 1
| 1

reach
"Whether USP16 targets the products of RNF8 and RNF168- and/or BMI1 and RING1B dependent ubiquitylation remains to be established."
USP16 affects HOXD10
| 2 1
USP16 increases the amount of HOXD10.
| 1
USP16 increases the amount of HOXD10. 1 / 1
| 1

reach
"Furthermore inhibition of USP16 activity in vivo in Xenopus embryos similarly reduced HoxD10 gene expression, and resulted in abnormalities in the anterior-posterior patterning of the embryos (Joo et [MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
USP16 decreases the amount of HOXD10.
| 1
USP16 decreases the amount of HOXD10. 1 / 1
| 1

reach
"Knockdown of USP16 or an over-expression of its catalytically inactive form in cell lines increased H2AK119Ub levels both globally and at the HoxD10 locus, and suppressed HoxD10 gene expression (Cai e[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
USP16 binds HOXD10.
| 1
| 1

sparser
"ChIP studies on HOXD10 binding of USP16 and the BMI1 subunit of PRC1 found both proteins are localized to the HOXD10 promoter, yet H2A was not ubiquitinated unless USP16 was depleted."
USP16 affects DNA Damage
| 3
USP16 activates DNA Damage.
| 2
| 2

reach
"Thus, the increased Usp16 expression in TS65Dn satellite cells could disrupt DNA repair, induce DNA damage, and impair satellite cell expansion."

reach
"Overexpression of USP16 may induce excessive DNA damage accumulation, leading to acquisition of prematurely senescent phenotypes in different DS cell types [272, 274]."
USP16 inhibits DNA Damage.
| 1
| 1

reach
"Since elevated Usp16 expression contributes to somatic stem cell dysfunction in Down syndrome 10 and Usp16 represses DNA damage responses XREF_BIBR, XREF_BIBR, we asked if Ts65Dn satellite cells accumulate more DNA damage that wild type satellite cells."
USP16 affects CDK1
2 1 |
2 1 |

No evidence text available

No evidence text available

No evidence text available
IKBKB affects CHUK
| 3
USP16 binds CHUK and IKBKB. 2 / 2
| 2

sparser
"USP16 selectively interacts with IKKβ and IKKα."
| PMC

sparser
"Depletion of the NBD disrupted the interaction of USP16 with both IKKβ and IKKα ( xref ), which further suggests that USP16 and NEMO may competitively bind to IKKβ and IKKα."
| PMC
| 1

sparser
"Depletion of the NBD disrupted the interaction of USP16 with both IKKβ and IKKα ( xref ), which further suggests that USP16 and NEMO may competitively bind to IKKβ and IKKα."
| PMC
H2AC20 affects USP16
2 | 1
2 |

No evidence text available

No evidence text available
| 1

sparser
"Both USP3 and USP16 are also associated with H2A deubiquitination following DNA damage processing [ xref , xref ]."
Ct-HBx affects USP16
| 1 2
Ct-HBx inhibits USP16. 3 / 3
| 1 2

eidos
"[ 94-96 ] Transcriptional downregulation of ubiquitin specific peptidase 16 ( USP16 ) by Ct-HBx is also shown to enhance tumorigenicity and stem-like properties of HCC cells ."

reach
"The aforementioned results revealed the tumour-suppressive functions of USP16, which could be downregulated by Ct-HBx in liver tumour cells."

reach
"In conclusion, our study suggests that USP16 is negatively regulated by Ct-HBx and plays a critical role in the pro tumorigenicity of Ct-HBx proteins."
CHUK affects IKBKB
| 3
USP16 binds CHUK and IKBKB. 2 / 2
| 2

sparser
"USP16 selectively interacts with IKKβ and IKKα."
| PMC

sparser
"Depletion of the NBD disrupted the interaction of USP16 with both IKKβ and IKKα ( xref ), which further suggests that USP16 and NEMO may competitively bind to IKKβ and IKKα."
| PMC
| 1

sparser
"Depletion of the NBD disrupted the interaction of USP16 with both IKKβ and IKKα ( xref ), which further suggests that USP16 and NEMO may competitively bind to IKKβ and IKKα."
| PMC
CDKN2A affects USP16
| 1 2
CDKN2A binds USP16.
| 2
| 2

sparser
"In addition, Usp16 is associated with decreased ubiquitination of Cdkn2a and accelerated senescence in Ts65Dn fibroblasts."

sparser
"Moreover, Usp16 is associated with decreased ubiquitination of Cdkn2a and accelerated senescence in Ts65Dn fibroblasts."
CDKN2A activates USP16.
| 1
CDKN2A activates USP16. 1 / 1
| 1

reach
"Usp16 regulation of the Wnt pathway in mouse and human tissues is at least in part mediated by activation of Cdkn2a, a regulator of senescence."
LncEPAT affects USP16
| 2
LncEPAT inhibits USP16. 2 / 2
| 2

eidos
"We next explored the role of blockade of USP16 by lncEPAT in gliomagenesis using an in vivo mouse model ."

eidos
"The role of blockade of USP16 by lncEPAT in regulating senescence-like cell growth suppression and GBM tumorigenesis ."
Lipopolysaccharide increases the amount of USP16.
| 1
Lipopolysaccharide increases the amount of USP16. 1 / 1
| 1

reach
"Furthermore, LPS and TNFalpha, strong activators of the NFkappaB pathway, upregulated the USP16 transcription."
| 1

reach
"Furthermore, we observed significant reductions in nuclear p50 levels and small decreases in nuclear translocated c-Rel and p65 levels in LPS stimulated USP16 deficient BMDMs (XREF_FIG)."
| PMC
2 |
Cyclosporin A increases the amount of USP16. 2 / 2
2 |

No evidence text available

No evidence text available
Bisphenol A affects USP16
2 |
Bisphenol A increases the amount of USP16.
1 |
Bisphenol A increases the amount of USP16. 1 / 1
1 |

No evidence text available
Bisphenol A decreases the amount of USP16.
1 |
Bisphenol A decreases the amount of USP16. 1 / 1
1 |

No evidence text available
1 1 |
USP16 binds.
1 |
1 |

No evidence text available
USP16 is active.
1 |
USP16 phosphorylated on S552 is active. 1 / 1
1 |

"Here, we report that cyclin-dependent kinase 1 (cdk1) phosphorylates the histone h2a deubiquitinase ubp-m at serine 552 (s552p), and, importantly, this phosphorylation is required for cell cycle progression."
USP16 affects proteolysis
| 2
| 2

reach
"TTK dependent phosphorylation of Usp16 causes protein degradation."

reach
"RT-PCR with Usp16 specific primers confirmed equivalent mRNA expression, suggesting that Usp16 phosphorylation promotes protein degradation."
USP16 affects lncEPAT
| 2
USP16 activates lncEPAT. 2 / 2
| 2

eidos
"The number of senescence cells was significantly increased in xenograft tumor tissues with lncEPAT depletion than in controls , whereas depleting USP16 reversed this effect of lncEPAT depletion ( Fig. 7H ) ."

eidos
"In contrast , depleting lncEPAT promoted the expression of these genes in GSC23 cells , while depleting USP16 partially reversed the effect of lncEPAT depletion on the promotion of these genes ( fig ."
USP16 affects PRC1
| 2
USP16 inhibits PRC1. 2 / 2
| 2

reach
"Interestingly, USP16, which is located on human chromosome 21 and triplicated in Down 's syndrome, reduces the self-renewal of hematopoietic stem cells and the expansion of mammary epithelial cells, neural progenitors and fibroblasts in mice, suggesting that Usp16 may antagonize PRC1 function in the self-renewal and/or senescence pathways 31."

reach
"Since Bmi1 is known to be critical for the maintenance of neural progenitors XREF_BIBR, XREF_BIBR, XREF_BIBR, we hypothesized that an extra copy of the PRC1 antagonist Usp16 could have a role in regulating also their expansion in Ts65Dn mice."
USP16 affects MKI67
| 1 1
USP16 increases the amount of MKI67.
| 1
USP16 increases the amount of MKI67. 1 / 1
| 1

reach
"IHC staining analysis of the xenograft tissues revealed that inhibiting USP16 reduced Ki67 expression, indicating USP16 knockdown impaired the proliferation of PCa cells."
USP16 activates MKI67.
| 1
USP16 activates MKI67. 1 / 1
| 1

eidos
"IHC staining analysis of the xenograft tissues revealed that inhibiting USP16 reduced Ki67 expression , indicating USP16 knockdown impaired the proliferation of PCa cells ( Fig. 3d-f ) ."
USP16 affects IKKs
| 2
USP16 activates IKKs. 2 / 2
| 2

reach
"Substrate specific recognition of IKKs mediated by USP16 facilitates autoimmune inflammation."
| PMC

reach
"Substrate specific recognition of IKKs mediated by USP16 facilitates autoimmune inflammation."
USP16 affects IKBKG
| 2
| 1

sparser
"Depletion of the NBD disrupted the interaction of USP16 with both IKKβ and IKKα ( xref ), which further suggests that USP16 and NEMO may competitively bind to IKKβ and IKKα."
| PMC
USP16 binds CHUK and IKBKG. 1 / 1
| 1

sparser
"IKKα and IKKβ contain similar functional domains; thus, we further evaluated the interaction of USP16 with IKKα and NEMO."
| PMC
USP16 affects Flag
| 2
USP16 binds MYC and Flag. 1 / 1
| 1

sparser
"To identify whether USP16 serves as a DUB of c-Myc, HEK293T cells were transfected with plasmids encoding HA-ubiquitin and Flag-c-Myc with wild-type USP16 or its catalytically inactive mutant USP16-C205S and treated with MG132."
| 1

sparser
"Furthermore, USP16 protein was detected when Flag-c-Myc was immunoprecipitated by Flag antibody, and inversely c-Myc was detected when Flag-USP16 was immunoprecipitated in PC3 cells (Fig. xref c and d)."
USP16 affects EXOSC10
1 1 |
1 1 |

No evidence text available

No evidence text available
USP16 affects DNA repair
| 2
USP16 inhibits DNA repair.
| 1
| 1

reach
"Thus, the increased Usp16 expression in TS65Dn satellite cells could disrupt DNA repair, induce DNA damage, and impair satellite cell expansion."
USP16 activates DNA repair.
| 1
USP16 bound to HERC2 activates DNA repair. 1 / 1
| 1

reach
"USP16 interacts with HERC2 and modulates the ubiquitination in DNA repair machinery components."
USP16 affects DHPS
| 2
USP16 inhibits DHPS.
| 1
USP16 inhibits DHPS. 1 / 1
| 1

reach
"USP16 is upregulated in Down 's syndrome (DS) cells due to extrachromosomal triplication in trisomy 21, downregulation of USP16 partially restores the impaired proliferation in DS somatic stem cells."
USP16 activates DHPS.
| 1
USP16 activates DHPS. 1 / 1
| 1

reach
"Furthermore, in human tissues overexpression of USP16 reduces the expansion of normal fibroblasts and post-natal neural progenitors while downregulation of USP16 partially rescues the proliferation defects of DS fibroblasts."
RPS27A affects USP16
| 2
RPS27A ubiquitinates USP16. 2 / 2
| 2

sparser
"In summary, our data show that USP16 KO and RPS27a ubiquitination not only affect late stages of 40S maturation but also translation."

sparser
"In a next step, we tested whether USP16 KO and RPS27a ubiquitination also affect translation."
RNF8 affects USP16
2 |
2 |

No evidence text available

No evidence text available
Proteasome affects USP16
| 2
Proteasome inhibits USP16.
| 1
| 1

reach
"Taken together, these data suggest that Usp16 is a phosphorylation substrate of TTK and that Usp16 phosphorylation on S415, S552, or T554 leads to proteasome degradation of Usp16."
Proteasome decreases the amount of USP16.
| 1
Proteasome decreases the amount of mutated USP16. 1 / 1
| 1

reach
"Inhibition of the proteasome with 10 muM MG-132 restored expression of the phosphomimetic Usp16 mutant (XREF_FIG)."
NFkappaB affects USP16
| 1 1
NFkappaB increases the amount of USP16.
| 1
NFkappaB increases the amount of USP16. 1 / 1
| 1

reach
"Transcriptional activation of USP16 gene expression by NFkappaB signaling."
NFkappaB binds USP16.
| 1
NFkappaB binds USP16. 1 / 1
| 1

isi
"Three bona fide NFkappaB binding sites were found in USP16 promoter."

reach
"To identify whether USP16 serves as a DUB of c-Myc, HEK293T cells were transfected with plasmids encoding HA-ubiquitin and Flag-c-Myc with wild-type USP16 or its catalytically inactive mutant USP16 C205S and treated with MG132."

reach
"To identify whether USP16 serves as a DUB of c-Myc, HEK293T cells were transfected with plasmids encoding HA-ubiquitin and Flag-c-Myc with wild-type USP16 or its catalytically inactive mutant USP16 C205S and treated with MG132."
IKBKG affects USP16
| 2
| 1

sparser
"Depletion of the NBD disrupted the interaction of USP16 with both IKKβ and IKKα ( xref ), which further suggests that USP16 and NEMO may competitively bind to IKKβ and IKKα."
| PMC
USP16 binds CHUK and IKBKG. 1 / 1
| 1

sparser
"IKKα and IKKβ contain similar functional domains; thus, we further evaluated the interaction of USP16 with IKKα and NEMO."
| PMC
Flag affects USP16
| 2
USP16 binds MYC and Flag. 1 / 1
| 1

sparser
"To identify whether USP16 serves as a DUB of c-Myc, HEK293T cells were transfected with plasmids encoding HA-ubiquitin and Flag-c-Myc with wild-type USP16 or its catalytically inactive mutant USP16-C205S and treated with MG132."
| 1

sparser
"Furthermore, USP16 protein was detected when Flag-c-Myc was immunoprecipitated by Flag antibody, and inversely c-Myc was detected when Flag-USP16 was immunoprecipitated in PC3 cells (Fig. xref c and d)."
EXOSC10 affects USP16
1 1 |
1 1 |

No evidence text available

No evidence text available
Ct-HBx proteins affects USP16
| 2
Ct-HBx proteins decreases the amount of USP16. 2 / 2
| 2

reach
"Thus, these data indicate that Ct-HBx proteins in liver cancer cells can negatively regulate USP16 expression."

reach
"Ct-HBx proteins downregulate USP16 expression."
CHUK affects IKBKG
| 2
| 1

sparser
"Depletion of the NBD disrupted the interaction of USP16 with both IKKβ and IKKα ( xref ), which further suggests that USP16 and NEMO may competitively bind to IKKβ and IKKα."
| PMC
USP16 binds CHUK and IKBKG. 1 / 1
| 1

sparser
"IKKα and IKKβ contain similar functional domains; thus, we further evaluated the interaction of USP16 with IKKα and NEMO."
| PMC
CHUK affects IKBKB, and USP16
| 2
USP16 binds CHUK and IKBKB. 2 / 2
| 2

sparser
"USP16 selectively interacts with IKKβ and IKKα."
| PMC

sparser
"Depletion of the NBD disrupted the interaction of USP16 with both IKKβ and IKKα ( xref ), which further suggests that USP16 and NEMO may competitively bind to IKKβ and IKKα."
| PMC
1 |
Valproic acid decreases the amount of USP16. 1 / 1
1 |

No evidence text available
Tungsten affects USP16
1 |
Tungsten decreases the amount of USP16. 1 / 1
1 |

No evidence text available
Thimerosal affects USP16
1 |
Thimerosal increases the amount of USP16. 1 / 1
1 |

No evidence text available
Tetrachloromethane increases the amount of USP16. 1 / 1
1 |

No evidence text available
Tert-butyl hydroperoxide increases the amount of USP16. 1 / 1
1 |

No evidence text available
Succimer affects USP16
1 |
Succimer increases the amount of USP16. 1 / 1
1 |

No evidence text available
1 |
Streptozocin increases the amount of USP16. 1 / 1
1 |

No evidence text available
1 |
Sodium arsenite increases the amount of USP16. 1 / 1
1 |

No evidence text available
Silver(0) affects USP16
1 |
Silver(0) increases the amount of USP16. 1 / 1
1 |

No evidence text available
1 |
Schizandrin B increases the amount of USP16. 1 / 1
1 |

No evidence text available
1 |
Propiconazole increases the amount of USP16. 1 / 1
1 |

No evidence text available
1 |
Progesterone increases the amount of USP16. 1 / 1
1 |

No evidence text available
Piroxicam affects USP16
1 |
Piroxicam increases the amount of USP16. 1 / 1
1 |

No evidence text available
1 |

No evidence text available
1 |

No evidence text available
Methyl methanesulfonate increases the amount of USP16. 1 / 1
1 |

No evidence text available
1 |
Methamphetamine decreases the amount of USP16. 1 / 1
1 |

No evidence text available
Magnetite nanoparticle increases the amount of USP16. 1 / 1
1 |

No evidence text available
1 |

No evidence text available
Jinfukang affects USP16
1 |
Jinfukang decreases the amount of USP16. 1 / 1
1 |

No evidence text available
Ionomycin affects USP16
1 |
Ionomycin increases the amount of USP16. 1 / 1
1 |

No evidence text available
1 |
Hypochlorous acid increases the amount of USP16. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-93-5p decreases the amount of USP16. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-519d-3p decreases the amount of USP16. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-324-5p decreases the amount of USP16. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-320a decreases the amount of USP16. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-30a-5p decreases the amount of USP16. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-20b-5p decreases the amount of USP16. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-20a-5p decreases the amount of USP16. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-182-5p decreases the amount of USP16. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-17-5p decreases the amount of USP16. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-106b-5p decreases the amount of USP16. 1 / 1
1 |

No evidence text available
Haloperidol affects USP16
1 |
Haloperidol increases the amount of USP16. 1 / 1
1 |

No evidence text available
Hairpins affects USP16
| 1
Hairpins decreases the amount of USP16. 1 / 1
| 1

reach
"These hairpins reduce Usp16 expression to 40-50% leading to a final expression level similar to the one observed in control animals (XREF_SUPPLEMENTARY)."
Gold atom affects USP16
1 |
Gold atom decreases the amount of USP16. 1 / 1
1 |

No evidence text available
Esculetin affects USP16
1 |
Esculetin increases the amount of USP16. 1 / 1
1 |

No evidence text available
1 |

No evidence text available
Dieldrin affects USP16
1 |
Dieldrin increases the amount of USP16. 1 / 1
1 |

No evidence text available
Dicrotophos affects USP16
1 |
Dicrotophos decreases the amount of USP16. 1 / 1
1 |

No evidence text available
Copper(II) sulfate increases the amount of USP16. 1 / 1
1 |

No evidence text available
1 |
Cobalt dichloride increases the amount of USP16. 1 / 1
1 |

No evidence text available
Cadmium dichloride increases the amount of USP16. 1 / 1
1 |

No evidence text available
1 |
Cadmium atom decreases the amount of USP16. 1 / 1
1 |

No evidence text available
C-Myc signalling affects USP16
| 1
C-Myc signalling activates USP16. 1 / 1
| 1

eidos
"Besides , it remains to explore whether c-Myc signalling could activate USP16 expression , resulting in a positive feedback loop that further promotes tumourigenesis ."
C-Myc knockdown affects USP16
| 1
C-Myc knockdown inhibits USP16. 1 / 1
| 1

reach
"Colony formation assays results suggest that c-Myc knockdown could abolish the effect of USP16 knockdown in terms of both cell proliferation and growth."
1 |
Benzo[a]pyrene decreases the amount of USP16. 1 / 1
1 |

No evidence text available
Benzene affects USP16
1 |
Benzene decreases the amount of USP16. 1 / 1
1 |

No evidence text available
Atrazine affects USP16
1 |
Atrazine increases the amount of USP16. 1 / 1
1 |

No evidence text available
YP_009227196 affects USP16
1 |
USP16 binds YP_009227196. 1 / 1
1 |

No evidence text available
XPO1 affects USP16
1 |
1 |

No evidence text available
Wnt affects USP16
| 1
| 1

sparser
"Finally, because of the high prevalence and early appearance of AD in the DS population and the multiple common mechanisms found in both conditions, DS can be considered a useful model to study AD etiopathology and to search for new therapeutic strategies. [188, 191] ↑ in DS and AD Enhancement of lipid, DNA, and RNA oxidation Glutamatergic system [189, 190] ↑ in AD Promotion of OS-induced excitotoxicity Cholinergic system [191] ↓ in DS and AD Aβ-induced enhancement of OS in cholinergic neurons mTOR [192] [193] [194] 196, 198] ↑ in DS and AD OS disruption of mTOR function and mTOR enhancement of oxidative damage Enhanced oxidative stress [191, 200, 201] ↑ in DS and AD Enhancement of ROS-mediated disruption of mitochondrial integrity and function OXPHOS [203] [204] [205] [206] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] ↓ in DS and AD Enhancement of Aβ production, alterations in cell membranes and synapses, reduction in mitochondrial inner membrane potential, reduction in energy production, and lower mitochondrial function Raptor/mTOR [197, 223, 224] ↑ in DS and AD Alterations in mitochondrial activity and metabolism Insulin signaling [241] [242] [243] ↓ in DS and AD Alterations in energy metabolism, impairment of neuronal activity, plasticity and survival, and facilitation of Aβ aggregation Glucose transport and metabolism [245] [246] [247] [248] [249] [250] ↓ in DS and AD Reduction in energy for synaptic transmission and neurotransmitter biosynthesis, alterations in autophagy PI3-K/Akt/mTOR [65, 67, [253] [254] [255] [256] ↑ in DS and AD Dysregulation of energy balance, induction of insulin resistance, altered autophagy Release of proinflammatory cytokines [269, 270] ↑ in DS and AD Induction of cellular senescence and enhancement by senescence Oxidative stress and mitochondrial dysfunction [15, 262] ↑ in DS and AD Induction of cellular senescence and enhancement by senescence Proteostasis (Aβ and tau) [267, 268] ↑ in DS and AD Induction of cellular senescence and enhancement by senescence, induction of cellular senescence and enhancement by senescence USP16-Wnt [271] [272] [273] ↑ UPS16 in DS/ ↓ Wnt in DS and AD Induction of senescence through DNA damage, downregulation of the Wnt pathway reducing stem cell renewal p38MAPK [281] [282] [283] [284] [285] ↑ in DS and AD Increase in release of cytokines Aβ/APP [287, 290] ↑ in DS and AD Increase in release of cytokines which further aggravates Aβ pathology HPA [292, 293] ↑ in AD Cytokines produce excessive activation of the HPA, which aggravates the energy deficits and enhances OS Inhibition of proliferation and promotion of premature differentiation, prevention the entry into the S phase of the cycle DYRK1A/Notch [312] [313] [314] Inhibition of notch signaling that controls neurogenesis, induction of a shift from neurogenic to glionenic fate of progenitors DYRK1A/NFAT [316] Delay of neurogenesis by the synergic effect with RCAN1 mTOR [317, 318] ↑ in DS and AD Apoptotic death of NPCs BDNF [92, 322] ↓ in DS and AD Impairment of cell proliferation and differentiation Shh [323] [324] [325] ↓ in DS Impairment of proliferation of NPCs •AD, in individuals with or without DS, is a disease with a complex set of neuropathological signs. •Numerous signalling pathways are implicated in the onset and aggravation of this neuropathology. •The same signalling pathway often plays a role in the appearance or progression of different signs of AD. •In many cases, synergic effects and feedback loops exist between these pathways. •Because of the complex etiopathology of AD and the interrelation between the factors responsible for the symptoms of the disease, therapeutic approaches should combine different targets. • AD, in individuals with or without DS, is a disease with a complex set of neuropathological signs."
WDR54 affects USP16
1 |
1 |

No evidence text available
USP3 affects USP16
| 1
| 1

sparser
"Both USP3 and USP16 are also associated with H2A deubiquitination following DNA damage processing [ xref , xref ]."
USP16 affects ubiquitination endogenous Tektins
| 1
USP16 inhibits ubiquitination endogenous Tektins. 1 / 1
| 1

eidos
"Furthermore , we analyzed the influence of USP16 on Tektin ubiquitination and found that the down-regulation of USP16 markedly enhanced the ubiquitination of endogenous Tektins ( Fig. 6G ) ."
USP16 affects ubiquitination endogenous IKKbeta
| 1
USP16 inhibits ubiquitination endogenous IKKbeta. 1 / 1
| 1

eidos
"Although no effect on the protein levels of IKKbeta was detected , USP16 deficiency significantly promoted the ubiquitination of endogenous IKKbeta ( Fig. 4E ) ."
| PMC
USP16 affects ubiquitination Tektins
| 1
USP16 inhibits ubiquitination Tektins. 1 / 1
| 1

eidos
"( G ) Western blotting showed that the down-regulated USP16 contributed to the increased ubiquitination levels of Tektins ."
USP16 affects ubiquitin-mediated Tektins
| 1
USP16 inhibits ubiquitin-mediated Tektins. 1 / 1
| 1

eidos
"CEP78 plays a role in sperm-connecting piece formation by up-regulating USP16 expression , and this increase in USP16 expression inhibits ubiquitin-mediated degradation of Tektins to regulate the biogenesis of sperm flagella ."
USP16 affects ubiquitin mark
| 1
USP16 inhibits ubiquitin mark. 1 / 1
| 1

reach
"Simultaneous tethering of RING1B and USP16 to the array completely eliminated the H2A-K119 ubiquitin mark from the array (XREF_SUPPLEMENTARY and XREF_SUPPLEMENTARY)."
USP16 affects uH2A
| 1
USP16 inhibits uH2A. 1 / 1
| 1

eidos
"Knockdown of Usp16 leads to an increase in uH2A and a decrease in the number of cells undergoing mitosis ( 153 ) ."
USP16 affects tumor growth
| 1
USP16 inhibits tumor growth. 1 / 1
| 1

eidos
"Furthermore , USP16 is involved in human hepatocellular carcinoma , since USP16 down-regulation critically promoted tumor growth ( 35 ) ."
| PMC
USP16 affects transcription DNA sites
| 1
USP16 activates transcription DNA sites. 1 / 1
| 1

eidos
"Depletion of USP16 increases H2A ubiquitylation and restores the otherwise repressed transcription at DNA damage sites ."
USP16 affects rescue defect
| 1
USP16 inhibits rescue defect. 1 / 1
| 1

eidos
"Knockdown of Usp16 causes a decrease in Hox expression and the rescue from this defect requires the deubiquitinating activity of Usp16 ."
USP16 affects prostate cancer cell growth
| 1
USP16 activates prostate cancer cell growth. 1 / 1
| 1

eidos
"In contrast , down-regulation of USP16 markedly suppressed prostate cancer cell growth both in vitro and in vivo ( 38 ) ."
USP16 affects primary tissues
| 1
USP16 activates primary tissues. 1 / 1
| 1

eidos
"Usp16 modulates Wnt signaling in primary tissues through Cdkn2a regulation Regulation of the Wnt pathway in stem cells and primary tissues is still poorly understood ."
USP16 affects primary mammary epithelial fibroblast cells
| 1
USP16 activates primary mammary epithelial fibroblast cells. 1 / 1
| 1

eidos
"Discussion Our data show that Bmi1 and Usp16 , important chromatin regulators in stem cells , modulate Wnt signaling in primary mammary epithelial and fibroblast cells ."
USP16 affects polyubiquitination c-Myc
| 1
USP16 inhibits polyubiquitination c-Myc. 1 / 1
| 1

eidos
"Besides , the knockdown of USP16 significantly enhanced the polyubiquitination of c-Myc ( Fig. 5h ) ."
USP16 affects p105 phosphorylation Usp16 acts histone H2A deubiquitinase H2A deubiquitination subsequent ESCs hematopoietic system
| 1
USP16 activates p105 phosphorylation Usp16 acts histone H2A deubiquitinase H2A deubiquitination subsequent ESCs hematopoietic system. 1 / 1
| 1

eidos
"USP16 specifically promotes p105 phosphorylation Usp16 acts as a histone H2A deubiquitinase to promote H2A deubiquitination and subsequent gene expression in ESCs and the hematopoietic system ( 31 , 32 ) ."
| PMC
USP16 increases the amount of p-tolyl beta-D-glucuronide. 1 / 1
| 1

reach
"Histone deubiquitination has been the subject of recent reviews [XREF_BIBR, XREF_BIBR, XREF_BIBR], and here we highlight three DUBs, USP7, USP16, and BAP1, that function in polycomb group (PcG) complexes and modulate transcription of PcG target genes."
USP16 affects mitosis
| 1
USP16 activates mitosis. 1 / 1
| 1

reach
"Usp16 regulates kinetochore localization of Plk1 to promote proper chromosome alignment in mitosis."
USP16 affects miR-146a
| 1
USP16 increases the amount of miR-146a. 1 / 1
| 1

isi
"CLL-Exo treatment up-regulated miR-146a and down-regulated expression of CAF markers (alpha-SMA and FAP) and USP16."
| 1
| 1

reach
"Thus, our data unveil a unique mechanism by which Usp16 promotes the localization and maintenance of Plk1 on the kinetochores for proper chromosome alignment."
USP16 affects lncEPAT ubH2A
| 1
USP16 activates lncEPAT ubH2A. 1 / 1
| 1

eidos
"Further , we found that lncEPAT depletion on the levels of ubH2A was reversed by further depletion of USP16 ( fig ."
USP16 affects lncEPAT tumor sphere cell
| 1
USP16 activates lncEPAT tumor sphere cell. 1 / 1
| 1

eidos
"We found that , in GSC23 and GSC2 cells , depleting USP16 reversed the effect of lncEPAT knockdown on tumor sphere formation and cell proliferation ( Fig. 7 , D to F ) ."
USP16 affects lncEPAT senescence
| 1
USP16 activates lncEPAT senescence. 1 / 1
| 1

eidos
"S4D ) , while depletion of USP16 reversed the effect of lncEPAT knockdown on GSC senescence ( Fig. 6E ) ."
USP16 increases the amount of lipopolysaccharide. 1 / 1
| 1

reach
"Furthermore, LPS and TNFalpha, strong activators of the NFkappaB pathway, upregulated the USP16 transcription."
USP16 affects interaction IKKbeta p105
| 1
USP16 activates interaction IKKbeta p105. 1 / 1
| 1

eidos
"Consistently , the interaction between IKKbeta and p105 in MEFs stimulated by TNF-alpha was also disrupted by the absence of USP16 , indicating that USP16 is broadly essential for the binding of p105 and IKKbeta in various cell types ( Fig. 4B ) ."
| PMC
USP16 affects inflammatory cytokines
| 1
USP16 activates inflammatory cytokines. 1 / 1
| 1

eidos
"The absence of USP16 not only suppressed the expression of inflammatory cytokines but also significantly inhibited the levels of costimulators , such as CD40 , CD80 , and CD86 , on the surfaces of BMDMs ( Fig. 5C ) ."
| PMC
USP16 affects inducible
| 1
USP16 activates inducible. 1 / 1
| 1

eidos
"USP16 is a histone deubiquitinase which facilitates G2 / M transition during the cell cycle , regulates DNA damage repair and contributes to inducible gene expression ."
USP16 affects half-life protein
| 1
USP16 activates half-life protein. 1 / 1
| 1

eidos
"We found that ectopic expression of USP16 enhanced the stability of c-Myc protein , while USP16 knockdown reduced the half-life of c-Myc protein ( Fig. 4e and f ) ."
USP16 affects growth PCa cells
| 1
USP16 activates growth PCa cells. 1 / 1
| 1

eidos
"Depletion of USP16 was shown to significantly suppress the growth of PCa cells both in vitro and in vivo ."
USP16 affects expansion fibroblasts neurosphere neural progenitor cells
| 1
USP16 inhibits expansion fibroblasts neurosphere neural progenitor cells. 1 / 1
| 1

eidos
"LncEPAT attenuates USP16-mediated tumor suppression Although USP16 has been shown to reduce the expansion of normal fibroblasts and neurosphere formation of neural progenitor cells ( 16 ) , its role in tumorigenesis of glioma is unknown ."
USP16 affects epithelials
| 1
USP16 inhibits epithelials. 1 / 1
| 1

eidos
"Taken together , these data show that Usp16 limits the activation of the Wnt pathway in mammary epithelials , affecting the growth of basal cells ."
USP16 affects endogenous IKKbeta
| 1
USP16 leads to the ubiquitination of endogenous IKKbeta. 1 / 1
| 1

reach
"Although no effect on the protein levels of IKKbeta was detected, USP16 deficiency significantly promoted the ubiquitination of endogenous IKKbeta (XREF_FIG)."
| PMC
USP16 affects delayed tumour onset mice
| 1
USP16 inhibits delayed tumour onset mice. 1 / 1
| 1

eidos
"In addition , the inhibition of USP16 led to a delayed tumour onset in nude mice ( Fig. 3c ) ."
USP16 affects costimulators such CD40 CD86 surfaces BMDMs
| 1
USP16 activates costimulators such CD40 CD86 surfaces BMDMs. 1 / 1
| 1

eidos
"The absence of USP16 not only suppressed the expression of inflammatory cytokines but also significantly inhibited the levels of costimulators , such as CD40 , CD80 , and CD86 , on the surfaces of BMDMs ( Fig. 5C ) ."
| PMC
USP16 affects cells undergoing mitosis
| 1
USP16 activates cells undergoing mitosis. 1 / 1
| 1

eidos
"Knockdown of Usp16 leads to an increase in uH2A and a decrease in the number of cells undergoing mitosis ( 153 ) ."
USP16 affects cell growth PCa cells
| 1
USP16 activates cell growth PCa cells. 1 / 1
| 1

eidos
"Cells proliferation were then analysed using a CCK-8 assay , and the results revealed that knockdown of USP16 markedly reduced cell growth in PCa cells ( Fig. 2b and c ) ."
USP16 affects cell cycle processing
| 1
USP16 activates cell cycle processing. 1 / 1
| 1

eidos
"In mammalian cells , USP16 is expressed diffusely during mitosis and contributes to cell cycle processing ."
| PMC
USP16 affects c-Myc protein abundance
| 1
USP16 activates c-Myc protein abundance. 1 / 1
| 1

eidos
"We found that knockdown of USP16 dramatically reduced c-Myc protein abundance but did not affect its mRNA levels ( Fig. 4a and b ) , suggesting that the regulation of c-Myc by USP16 occurs at the post-transcriptional level ."
USP16 affects c-Myc abundance
| 1
USP16 activates c-Myc abundance. 1 / 1
| 1

eidos
"In addition , knockdown of USP16 significantly reduced c-Myc abundance at the post-translational level , while overexpression of wild-type USP16 , instead of its catalytic-inactive mutant ( C205S ) [ 23 ] , stabilized c-Myc ."
USP16 affects activation p105 IKK complex LPS
| 1
USP16 activates activation p105 IKK complex LPS. 1 / 1
| 1

eidos
"USP16 deficiency strongly inhibited the activation of p105 by the typical IKK complex under LPS stimulation , as revealed by an in vitro kinase assay ( Fig. 3G ) ."
| PMC
USP16 affects activation NF-kappaB induced TNF-alpha
| 1
USP16 activates activation NF-kappaB induced TNF-alpha. 1 / 1
| 1

eidos
"Notably , USP16 deficiency greatly impaired the activation of NF-kappaB induced by TNF-alpha ( Fig. 3 , E and F ) ."
| PMC
USP16 affects abundance c-Myc
| 1
USP16 activates abundance c-Myc. 1 / 1
| 1

eidos
"Analysis of c-Myc protein levels by Western blot revealed that knockdown of USP16 significantly decreased the abundance of c-Myc ( Fig. 1d ) ."
USP16 affects YP_009227196
1 |
USP16 binds YP_009227196. 1 / 1
1 |

No evidence text available
USP16 affects XPO1
1 |
1 |

No evidence text available
USP16 affects WDR54
1 |
1 |

No evidence text available
USP16 affects VIM
| 1
USP16 increases the amount of VIM. 1 / 1
| 1

reach
"As shown in XREF_FIG, expression of the Igf2, Vimentin, Gata4, Gata6, and Foxa2 genes was significantly increased in EBs formed from Usp16 -/- ESCs rescued by wild-type Usp16."
USP16 affects Ubiquitin
| 1
USP16 increases the amount of Ubiquitin. 1 / 1
| 1

reach
"Ubiquintation of histone 2A at sites of DNA damage recruits DNA damage repair proteins, while Usp16 and other de-ubiquintases restore ubiquitin levels to normal approximately 24h after damage XREF_BIBR - XREF_BIBR."
USP16 affects USP3
| 1
| 1

sparser
"Both USP3 and USP16 are also associated with H2A deubiquitination following DNA damage processing [ xref , xref ]."
USP16 affects USP16
| 1
USP16 activates USP16. 1 / 1
| 1

reach
"Concordantly, we found that ectopic expression of USP16 mostly restored the proliferation rate of USP16 knockdown cells."
USP16 affects UBD
1 |
1 |

No evidence text available
USP16 affects Tektin
| 1
USP16 activates Tektin. 1 / 1
| 1

eidos
"( E ) Western blotting showing that the up-regulated USP16 increased Tektin expression ( two-sided Student 's t test ; * P < 0.05 ; error bars , SEM ) ."
USP16 affects TXNL1
1 |
1 |

No evidence text available
USP16 affects TNF
| 1
USP16 increases the amount of TNF. 1 / 1
| 1

reach
"Furthermore, LPS and TNFalpha, strong activators of the NFkappaB pathway, upregulated the USP16 transcription."
USP16 affects TBX3
| 1
TBX3 binds USP16, GSN, and HOXD11. 1 / 1
| 1

sparser
"As shown in xref , Usp16 binding to promoter regions of Tbx3, HoxD11, and Gsn genes, which are activated during Usp16 +/+ ESC differentiation, were significantly reduced in Usp16 −/− EBs as compared to Usp16 +/+ EBs."
USP16 affects SRPRB
1 |
1 |

No evidence text available
USP16 affects Rspo-mediated LRP6 phosphorylation
| 1
USP16 activates Rspo-mediated LRP6 phosphorylation. 1 / 1
| 1

eidos
"Usp16 and p16Ink4a modulate Rspo-mediated LRP6 phosphorylation The Wnt pathway can be modulated via multiple mechanisms including expression of different extracellular receptor components as well as variations in the expression of intracellular signal transducers ."
USP16 affects RPLP0
| 1
| 1

sparser
"The absence of the 60S trans-acting factor RLP24 and the ribosomal protein RPL23a/uL23 further confirmed that USP16 specifically binds to 40S precursors."
USP16 affects RNF168
| 1
USP16 activates RNF168. 1 / 1
| 1

reach
"Whether USP16 targets the products of RNF8 and RNF168- and/or BMI1 and RING1B dependent ubiquitylation remains to be established."
USP16 affects RLP24
| 1
| 1

sparser
"The absence of the 60S trans-acting factor RLP24 and the ribosomal protein RPL23a/uL23 further confirmed that USP16 specifically binds to 40S precursors."
USP16 affects PTOV1
1 |
1 |

No evidence text available
USP16 affects PCa tumour growth
| 1
USP16 activates PCa tumour growth. 1 / 1
| 1

eidos
"Knockdown of USP16 impeded PCa tumour growth in vivo ."
USP16 affects PCa cells
| 1
USP16 activates PCa cells. 1 / 1
| 1

eidos
"IHC staining analysis of the xenograft tissues revealed that inhibiting USP16 reduced Ki67 expression , indicating USP16 knockdown impaired the proliferation of PCa cells ( Fig. 3d-f ) ."
USP16 affects PCa cell viability
| 1
USP16 activates PCa cell viability. 1 / 1
| 1

eidos
"Disrupting USP16 impairs PCa cell viability ."
USP16 affects PCa cell growth
| 1
USP16 activates PCa cell growth. 1 / 1
| 1

eidos
"These results demonstrate that inhibiting USP16 significantly suppressed PCa cell growth in vivo ."
USP16 affects PBD
| 1
| 1

reach
"Examination of the GST pull-down complexes showed that Usp16 specifically interacted with the wild-type (WT) PBD but not the PBD2A mutant (XREF_FIG), indicating that the interaction between Plk1 and Usp16 is PBD dependent."
USP16 affects Neoplasms
| 1
| 1

eidos
"A previous report shows that USP16 down-regulation promoted Hepatocellular carcinoma ( HCC ) tumorigenicity and malignancy ( 37 ) ."
USP16 affects NEURL4
1 |
1 |

No evidence text available
USP16 affects NANOG
1 |
USP16 deubiquitinates NANOG. 1 / 1
1 |
USP16 affects LRP6 phosphorylation
| 1
USP16 activates LRP6 phosphorylation. 1 / 1
| 1

eidos
"Usp16 and p16Ink4a modulates Rspo-mediated LRP6 phosphorylation ."
USP16 affects LIN
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USP16 activates LIN. 1 / 1
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reach
"Like HSCs, Usp16 mRNA expression was increased approximately 1.5 fold in Ts65Dn CD49f + CD24 med Lin - cells compared to control cells (XREF_SUPPLEMENTARY)."
USP16 affects Ink4a locus [
| 1
USP16 increases the amount of Ink4a locus [. 1 / 1
| 1

reach
"The deubiquitinating enzyme USP16 removes the ubiquitin protein from H2A-K119, and upregulates the transcription of the Ink4a locus [XREF_BIBR]."
USP16 affects IGF2BP3
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1 |

No evidence text available
USP16 affects IGF2
| 1
USP16 increases the amount of IGF2. 1 / 1
| 1

reach
"As shown in XREF_FIG, expression of the Igf2, Vimentin, Gata4, Gata6, and Foxa2 genes was significantly increased in EBs formed from Usp16 -/- ESCs rescued by wild-type Usp16."
USP16 affects Histone_H3
| 1
USP16 leads to the phosphorylation of Histone_H3. 1 / 1
| 1

reach
"USP16 specifically deubiquitinates histone H2A on lysine (K) 119 and K15 but not H2B in vivo, which leads to subsequent phosphorylation of H3 and chromosome segregation."
| PMC
USP16 affects Histone_H2B
| 1
USP16 deubiquitinates Histone_H2B on lysine. 1 / 1
| 1

reach
"USP16 specifically deubiquitinates histone H2A on lysine (K) 119 and K15 but not H2B in vivo, which leads to subsequent phosphorylation of H3 and chromosome segregation."
| PMC
USP16 affects His2A
| 1
USP16 activates His2A. 1 / 1
| 1

reach
"Several independent pieces of data suggest a functional relationship between uH2A levels and DISC : (i) expression of an H2A allele that can not be monoubiquitylated at lysine 119 partially rescues transcription (XREF_FIG), (ii) inhibition of the known H2A E3 ubiquitin ligase RNF8 and the related RNF168 partially reverses silencing (XREF_FIG), and (iii) depletion of the uH2A deubiquitylating enzyme USP16 prevents the reversal of silencing and diminution of uH2A at DSBs upon ATMi or cessation of damage."
USP16 affects Hepatocellular carcinoma HCC tumorigenicity
| 1
USP16 inhibits Hepatocellular carcinoma HCC tumorigenicity. 1 / 1
| 1

eidos
"A previous report shows that USP16 down-regulation promoted Hepatocellular carcinoma ( HCC ) tumorigenicity and malignancy ( 37 ) ."
USP16 affects HOXD11
| 1
TBX3 binds USP16, GSN, and HOXD11. 1 / 1
| 1

sparser
"As shown in xref , Usp16 binding to promoter regions of Tbx3, HoxD11, and Gsn genes, which are activated during Usp16 +/+ ESC differentiation, were significantly reduced in Usp16 −/− EBs as compared to Usp16 +/+ EBs."
USP16 affects HBxDelta35
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USP16 inhibits HBxDelta35. 1 / 1
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reach
"The levels of USP16 mRNA were also decreased in Huh7 and PLC/PRF/5 cells overexpressing HBxDelta35 (XREF_FIG)."
USP16 affects H4-16
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1 |

No evidence text available
USP16 affects H2BC3
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1 |

No evidence text available
USP16 affects H2BC13
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1 |

No evidence text available
USP16 affects H2Aub1
| 1
USP16 deubiquitinates H2Aub1. 1 / 1
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reach
"This kinase phosphorylates and activates the Usp16 deubiquitinase, which then deubiquitinates H2Aub1 (XREF_FIG)."
USP16 affects H2AZ1
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1 |

No evidence text available
USP16 affects H2AW
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USP16 deubiquitinates H2AW on K120. 1 / 1
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No evidence text available
USP16 affects H2AK119ub
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USP16 inhibits H2AK119ub. 1 / 1
| 1

eidos
"Interestingly , these changes are reversible as H2AK119ub mediated transcriptional silencing is regulated by USP16 , which erases H2AK119ub ( Shanbhag et al ., 2010 ) ."
USP16 affects H2AK119Ub
| 1
USP16 increases the amount of H2AK119Ub. 1 / 1
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reach
"Knockdown of USP16 or an over-expression of its catalytically inactive form in cell lines increased H2AK119Ub levels both globally and at the HoxD10 locus, and suppressed HoxD10 gene expression (Cai e[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
USP16 affects H2AC4
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1 |

No evidence text available
USP16 affects H2AC18
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No evidence text available
USP16 affects H2AC17
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USP16 deubiquitinates H2AC17. 1 / 1
1 |

"USP3 and USP16 function to remove ubiquitin from histone H2A during the DDR"
USP16 affects H2A-DUB
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USP16 inhibits H2A-DUB. 1 / 1
| 1

reach
"Immunodepletion of USP16 from a purified fraction also depleted H2A-DUB activity."
USP16 affects H2A ubiquitylation
| 1
USP16 inhibits H2A ubiquitylation. 1 / 1
| 1

eidos
"Depletion of USP16 increases H2A ubiquitylation and restores the otherwise repressed transcription at DNA damage sites ."
USP16 affects GSN
| 1
TBX3 binds USP16, GSN, and HOXD11. 1 / 1
| 1

sparser
"As shown in xref , Usp16 binding to promoter regions of Tbx3, HoxD11, and Gsn genes, which are activated during Usp16 +/+ ESC differentiation, were significantly reduced in Usp16 −/− EBs as compared to Usp16 +/+ EBs."
USP16 affects GATA6
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USP16 increases the amount of GATA6. 1 / 1
| 1

reach
"As shown in XREF_FIG, expression of the Igf2, Vimentin, Gata4, Gata6, and Foxa2 genes was significantly increased in EBs formed from Usp16 -/- ESCs rescued by wild-type Usp16."
USP16 affects GATA4
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USP16 increases the amount of GATA4. 1 / 1
| 1

reach
"As shown in XREF_FIG, expression of the Igf2, Vimentin, Gata4, Gata6, and Foxa2 genes was significantly increased in EBs formed from Usp16 -/- ESCs rescued by wild-type Usp16."
USP16 affects FOXA2
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USP16 increases the amount of FOXA2. 1 / 1
| 1

reach
"As shown in XREF_FIG, expression of the Igf2, Vimentin, Gata4, Gata6, and Foxa2 genes was significantly increased in EBs formed from Usp16 -/- ESCs rescued by wild-type Usp16."
USP16 affects FBXO11
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1 |

No evidence text available
USP16 affects FAP
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USP16 increases the amount of FAP. 1 / 1
| 1

isi
"CLL-Exo treatment up-regulated miR-146a and down-regulated expression of CAF markers (alpha-SMA and FAP) and USP16."
USP16 affects ESR1
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No evidence text available
USP16 affects DUB IKKbeta
| 1
USP16 activates DUB IKKbeta. 1 / 1
| 1

eidos
"USP16 mediated DUB of IKKbeta directly , while the USP16CI mutant lost its ability to regulate IKKbeta ubiquitination , as suggested by in vitro DUB assays ( Fig. 4G ) ."
| PMC
USP16 affects DSB repair
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USP16 inhibits DSB repair. 1 / 1
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reach
"USP16 pairs with HERC2 to remove H2A K15 linked ubiquitin conjugates and downregulate DSB repair whereas its ohnolog, USP45, has no known involvements in the DNA damage response."
USP16 leads to the ubiquitination of DNA Breaks, Double-Stranded. 1 / 1
| 1

reach
"Thus far, USP16 dependent reduction of H2A ubiquitylation and derepression of DSB induced transcription silencing is revealed, although whether USP16 directly deubiquitylates H2A is not clear [43]."
USP16 affects DBT
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1 |

No evidence text available
USP16 affects CUL3
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USP16 inhibits CUL3. 1 / 1
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reach
"Here, we showed that Usp16 antagonizes the activity of CUL3 based ubiquitin ligase by deubiquitinating Plk1, which not only promotes the localization of Plk1 to the kinetochores but also retains Plk1 there until metaphase."
USP16 affects CSNK1D
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No evidence text available
USP16 affects CHAF1A
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USP16 activates CHAF1A. 1 / 1
| 1

reach
"USP16 was confirmed as a direct target of miR-146a and USP16 overexpression in BM-MSCs abrogated the CLL-Exo-mediated up-regulation of CAF markers."
USP16 affects CDKN1A
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USP16 activates CDKN1A. 1 / 1
| 1

eidos
"Accordingly , the expression of p21 and Clusterin as senescence markers was induced by the depletion of lncEPAT but reversed by depletion of USP16 ( Fig. 7H ) ."
USP16 affects CALM1
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1 |

No evidence text available
USP16 affects BMI1
| 1
| 1

sparser
"ChIP studies on HOXD10 binding of USP16 and the BMI1 subunit of PRC1 found both proteins are localized to the HOXD10 promoter, yet H2A was not ubiquitinated unless USP16 was depleted."
USP16 affects BCL2L1
| 1
USP16 decreases the amount of BCL2L1. 1 / 1
| 1

reach
"In accordance with this observation, we also found that knockdown of USP16 decreased P21 but increased Bcl-XL and Bcl -2 expression in liver tumour cells."
USP16 affects BCL2
| 1
USP16 decreases the amount of BCL2. 1 / 1
| 1

reach
"In accordance with this observation, we also found that knockdown of USP16 decreased P21 but increased Bcl-XL and Bcl -2 expression in liver tumour cells."
USP16 affects AXIN2 mRNA
| 1
USP16 inhibits AXIN2 mRNA. 1 / 1
| 1

eidos
"Fig. S4B ) , we noticed that downregulation of USP16 increased AXIN2 mRNA induction three-fold compared to cells transfected with a control siRNA ( P < 0.05 ) ( Fig. 2f ) ."
USP16 affects APOM
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1 |

No evidence text available
USP16 affects ALPG
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1 |

No evidence text available
USP1 affects USP16
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USP1 activates USP16. 1 / 1
| 1

reach
"In addition, DUBs involved in DNA damage signaling are USP1 that targets PCNA (proliferating cell nuclear antigen) [76], FANCD2 and FANCI (the Fanconi anemia proteins) [93,94], and USP3 and USP16 that[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
UBP8 affects USP16
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UBP8 ubiquitinates USP16. 1 / 1
| 1

reach
"For example, Ubp8 and Ubp10 target ubiquitinated H2B, and BAP1 and USP16, among others, remove ubiquitin from H2A (Scheuermann et al., 2010; Weake and Workman, 2008)."
UBP10 affects USP16
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UBP10 ubiquitinates USP16. 1 / 1
| 1

reach
"For example, Ubp8 and Ubp10 target ubiquitinated H2B, and BAP1 and USP16, among others, remove ubiquitin from H2A (Scheuermann et al., 2010; Weake and Workman, 2008)."
UBD affects USP16
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1 |

No evidence text available
TXNL1 affects USP16
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1 |

No evidence text available
TNF affects USP16
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TNF increases the amount of USP16. 1 / 1
| 1

reach
"Furthermore, LPS and TNFalpha, strong activators of the NFkappaB pathway, upregulated the USP16 transcription."
THAP1 affects USP16
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THAP1 decreases the amount of USP16. 1 / 1
1 |

"Table 1. Genes regulated after ectopic expression of THAP1 in endothelial cells Genes down-regulated after ectopic expression of THAP1 in primary ECs"
TBX3 affects USP16
| 1
TBX3 binds USP16, GSN, and HOXD11. 1 / 1
| 1

sparser
"As shown in xref , Usp16 binding to promoter regions of Tbx3, HoxD11, and Gsn genes, which are activated during Usp16 +/+ ESC differentiation, were significantly reduced in Usp16 −/− EBs as compared to Usp16 +/+ EBs."
SRPRB affects USP16
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1 |

No evidence text available
RPLP0 affects USP16
| 1
| 1

sparser
"The absence of the 60S trans-acting factor RLP24 and the ribosomal protein RPL23a/uL23 further confirmed that USP16 specifically binds to 40S precursors."
RELA affects USP16
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Modified RELA increases the amount of USP16. 1 / 1
| 1

reach
"We showed that p65 overexpression enhanced endogenous USP16 mRNA level."
1 |
Plant Extracts increases the amount of USP16. 1 / 1
1 |

No evidence text available
PTOV1 affects USP16
1 |
1 |

No evidence text available
PBD affects USP16
| 1
| 1

reach
"Examination of the GST pull-down complexes showed that Usp16 specifically interacted with the wild-type (WT) PBD but not the PBD2A mutant (XREF_FIG), indicating that the interaction between Plk1 and Usp16 is PBD dependent."
NEURL4 affects USP16
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1 |

No evidence text available
NANOG affects USP10, USP16, USP3, USP37, USP44, and USP7
| 1
| 1

sparser
"USP25, USP44, USP49, and USP7 bind to the Sox2 promoter, while USP10, USP16, USP3, USP37, USP44, and USP7 bind to the Nanog promoter."
MYC affects Flag
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USP16 binds MYC and Flag. 1 / 1
| 1

sparser
"To identify whether USP16 serves as a DUB of c-Myc, HEK293T cells were transfected with plasmids encoding HA-ubiquitin and Flag-c-Myc with wild-type USP16 or its catalytically inactive mutant USP16-C205S and treated with MG132."
IKBKG affects IKBKB
| 1
| 1

sparser
"Depletion of the NBD disrupted the interaction of USP16 with both IKKβ and IKKα ( xref ), which further suggests that USP16 and NEMO may competitively bind to IKKβ and IKKα."
| PMC
IGF2BP3 affects USP16
1 |
1 |

No evidence text available
HOXD11 affects USP16
| 1
TBX3 binds USP16, GSN, and HOXD11. 1 / 1
| 1

sparser
"As shown in xref , Usp16 binding to promoter regions of Tbx3, HoxD11, and Gsn genes, which are activated during Usp16 +/+ ESC differentiation, were significantly reduced in Usp16 −/− EBs as compared to Usp16 +/+ EBs."
HOXD10 affects USP16
| 1
| 1

sparser
"ChIP studies on HOXD10 binding of USP16 and the BMI1 subunit of PRC1 found both proteins are localized to the HOXD10 promoter, yet H2A was not ubiquitinated unless USP16 was depleted."
HBxDelta35 affects USP16
| 1
HBxDelta35 inhibits USP16. 1 / 1
| 1

reach
"Thus, these data indicate that the downregulation of USP16 by HBxDelta35 may contribute to the stemness properties of liver tumour cells."
H4-16 affects USP16
1 |
1 |

No evidence text available
H2BC3 affects USP16
1 |
1 |

No evidence text available
H2BC13 affects USP16
1 |
1 |

No evidence text available
H2AZ1 affects USP16
1 |
1 |

No evidence text available
H2AC4 affects USP16
1 |
1 |

No evidence text available
H2AC20 affects USP3
| 1
| 1

sparser
"Both USP3 and USP16 are also associated with H2A deubiquitination following DNA damage processing [ xref , xref ]."
H2AC18 affects USP16
1 |
1 |

No evidence text available
GSN affects USP16
| 1
TBX3 binds USP16, GSN, and HOXD11. 1 / 1
| 1

sparser
"As shown in xref , Usp16 binding to promoter regions of Tbx3, HoxD11, and Gsn genes, which are activated during Usp16 +/+ ESC differentiation, were significantly reduced in Usp16 −/− EBs as compared to Usp16 +/+ EBs."
Flag affects MYC, and USP16
| 1
USP16 binds MYC and Flag. 1 / 1
| 1

sparser
"To identify whether USP16 serves as a DUB of c-Myc, HEK293T cells were transfected with plasmids encoding HA-ubiquitin and Flag-c-Myc with wild-type USP16 or its catalytically inactive mutant USP16-C205S and treated with MG132."
FBXO11 affects USP16
1 |
1 |

No evidence text available
FAP affects USP16
| 1
FAP increases the amount of USP16. 1 / 1
| 1

isi
"CLL-Exo treatment up-regulated miR-146a and down-regulated expression of CAF markers (alpha-SMA and FAP) and USP16."
ESR1 affects USP16
1 |
1 |

No evidence text available
1 |
Dietary Fats increases the amount of USP16. 1 / 1
1 |

No evidence text available
DBT affects USP16
1 |
1 |

No evidence text available
1 |
D-glucopyranose increases the amount of USP16. 1 / 1
1 |

No evidence text available
Ct-HBX proteins affects USP16
| 1
Ct-HBX proteins inhibits USP16. 1 / 1
| 1

reach
"These results indicate that USP16 inhibition by Ct-HBX proteins may provide growth advantages for liver tumour cells in vivo."
Carboxyl-terminal Truncated HBx affects USP16
| 1
Carboxyl-terminal Truncated HBx inhibits USP16. 1 / 1
| 1

reach
"USP16 Downregulation by Carboxyl-terminal Truncated HBx Promotes the Growth of Hepatocellular Carcinoma Cells."
CSNK1D affects USP16
1 |
1 |

No evidence text available
CHUK affects IKBKG, and USP16
| 1
USP16 binds CHUK and IKBKG. 1 / 1
| 1

sparser
"IKKα and IKKβ contain similar functional domains; thus, we further evaluated the interaction of USP16 with IKKα and NEMO."
| PMC
CHUK affects IKBKB, IKBKG, and USP16
| 1
| 1

sparser
"Depletion of the NBD disrupted the interaction of USP16 with both IKKβ and IKKα ( xref ), which further suggests that USP16 and NEMO may competitively bind to IKKβ and IKKα."
| PMC
CEP78 affects USP16
| 1
CEP78 activates USP16. 1 / 1
| 1

eidos
"( A ) Western blotting showed that CEP78 down-regulation decreased the USP16 expression ."
CALM1 affects USP16
1 |
1 |

No evidence text available
BRCC36 affects OTUB1, PSMD14, RNF8, USP16, and USP3
| 1
| 1

sparser
"The DUBs USP3, USP16, BRCC36, POH1, and OTUB1 are associated with negative regulation of the RNF8 pathway, with USP3 and USP16 being first linked to this pathway through their ability to oppose H2A ub[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
BMI1 affects USP16
| 1
| 1

sparser
"ChIP studies on HOXD10 binding of USP16 and the BMI1 subunit of PRC1 found both proteins are localized to the HOXD10 promoter, yet H2A was not ubiquitinated unless USP16 was depleted."
APOM affects USP16
1 |
1 |

No evidence text available
ALPG affects USP16
1 |
1 |

No evidence text available
3-methylcholanthrene increases the amount of USP16. 1 / 1
1 |

No evidence text available
3-hydroxyisovaleric acid increases the amount of USP16. 1 / 1
1 |

No evidence text available
2-hydroxypropanoic acid decreases the amount of USP16. 1 / 1
1 |

No evidence text available
17alpha-ethynylestradiol increases the amount of USP16. 1 / 1
1 |

No evidence text available