IndraLab

Statements


PAN3 affects PAN2
4 2 | 128 86
PAN3 binds PAN2.
4 2 | 125 86
4 1 | 125 73

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"Deadenylation is triggered by deadenylases, which include the CCR4 and NOT complex, the PAN2 and PAN3 complex and PARN in mammals."

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"A previous study using Pan3 mutants defective in dimerization suggested that a single Pan3 chain could bind Pan2 (Christie etal, 2013)."

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"Moreover, interactions between eIF4G and the poly [A] binding protein Pab1 are capable of mediating interactions between the 5 ' and 3 ' ends of mRNA [XREF_BIBR], whereby Pab1 stimulates both translation initiation [XREF_BIBR, XREF_BIBR] and deadenylation by the Pan2 and Pan3 complex [XREF_BIBR]."

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"Furthermore, these results are consistent with previous observations indicating that the CCR4, CAF1, and NOT complex takes over cytoplasmic deadenylation in the absence of the PAN2 and PAN3 complex (T[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

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"Taken together, these data demonstrate that Cid1 and Ccr4, but neither the Pan2 and Pan3 complex nor PARN, are important for mRNA decay, as judged by the increased stability of urg1 transcripts in the corresponding deletion strains."

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"The role of the PAN2 and PAN3 complex in silencing was also analyzed by determining the effects of PAN3 and NOT1 depletion on silencing that was mediated directly by tethering the GW182 protein."

sparser
"Two protein complexes account for the major cytoplasmic deadenylation activities in eukaryotes: Pan2-Pan3 and Ccr4-Not ( xref )."

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"Although Pan3 and Caf1 associate with Pan2 and Ccr4 poly (A) nucleases, respectively, their in vivo roles in mammalian mRNA turnover remain unclear."

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"POP2, like PARN and PAN2, the catalytic subunit of the Pan2 and Pan3 complex, is a member of the DEDD nuclease family."

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"However, it is still possible that the PAN2 and PAN3 complex may be important for the silencing of a subset of miRNA targets.Thus far, our data indicate that GW182 proteins recruit deadenylase complex[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
CNOT7 binds PAN2, PAN3, and ccr4. 6 / 6
| 6

sparser
"Additionally, Pan2-Pan3 can form a super complex with Ccr4-Caf1, which provides an opportunity to coordinate the two phases of deadenylation [ xref ]."

sparser
"Since ARE/ARE-BP complexes have not yet been reported to directly interact with either the Pan2-Pan3 or Ccr4-Caf1 complex, one possibility is that the binding of ARE-BPs to AREs may interfere with the interaction between the 5′ cap/eIF4F complex and the 3′ poly(A)/PABP complex, thus preventing the formation of a closed-loop structure ( xref )."

sparser
"Although Pan3 and Caf1 associate with Pan2 and Ccr4 poly(A) nucleases, respectively ( xref ; xref ; xref ; xref ; xref ), their in vivo roles in mammalian mRNA turnover remain unclear."

sparser
"It appears that these two proteins do not directly interact with Pan2-Pan3 or the Ccr4-Caf1 deadenylase complex."

sparser
"The notion that the Pan2Pan3 and Ccr4Caf1 complexes can associate with each other was further confirmed by the results showing that Pan3-V5, endogenous Caf1, and a modest amount of endogenous PABP were coprecipitated with HA-Pan2 by an anti-HA antibody when HA-Pan2 and Pan3-V5 were coexpressed ( xref )."

sparser
"Pan2Pan3 and Ccr4Caf1 complexes can interact with each other in vivo."
PKC binds PAN2 and PAN3. 1 / 1
| 1

sparser
"When we tested the interaction of the ct Pan2Pan3 PKC complex with polyA RNA, the binding was comparable to ct Pan3 PKC alone (Fig  xref B)."
PAN2 binds PAN3 and ccr4. 1 / 1
| 1

sparser
"Interestingly, interactions between Pan2-Pan3 and Ccr4-Not can be detected suggesting that both deadenylase complexes can reside in a higher order complex that may include other components ( xref )."
PAN2 binds MARF1 and PAN3. 1 / 1
| 1

sparser
"Next, we tested whether MARF1 binds Pan2 and Pan3, components of the Pan2Pan3 deadenylase complex, and found that they did not co-immunoprecipitate with MARF1 (Supplementary Fig.  xref , D)."
PAN2 binds PAN3, exonuclease, and ccr4. 1 / 1
| 1

sparser
"Of note, Ago2 is also known to regulate mRNA silencing through interacting with exonuclease complexes, the Ccr4-Not and Pan2-Pan3 complexes xref , in a miRNA-independent manner, which likely contributes to suppression of protein translation and energy metabolism in the liver."
PAN2 binds PAN3 and MTA2. 1 / 1
| 1

sparser
"In summary, we found that it was difficult to disrupt the Pan2Pan3 interaction by deletion of substantial regions of ct Pan2 PID and show that a core region (residues 343–406) makes a major contribution to the association of ct Pan2 and ct Pan3."
PAN2 binds PAN3 and PABPC1. 1 / 1
1 |

No evidence text available
RNPC3 binds PAN2 and PAN3. 1 / 1
| 1

sparser
"We concluded that Pan2-Pan3 does not stably interact with short poly(A) RNPs containing a single Pab1 but requires longer poly(A) RNPs containing two or more Pab1 protomers."
CNOT7 binds PAN2, PAN3, nuclease, and ccr4. 1 / 1
| 1

sparser
"Collectively, our data support that Pan2Pan3 and Ccr4Caf1 poly(A) nuclease complexes can associate with each other to form a supercomplex in vivo."
PAN3 inhibits PAN2.
| 1
PAN3 inhibits PAN2. 1 / 2
| 1

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"It is therefore a possibility that PAN3 depletion prevents USP52 localization to P-bodies and thus contributes to the destabilization of AMD substrates, as we have observed in the case of HIF1A."
PAN3 activates PAN2.
| 2
PAN3 activates PAN2. 2 / 2
| 2

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"Because Pan3 is able to enhance localization of Pan2 to P-bodies (XREF_FIG), we then tested whether Pan3 also helps Ccr4 and Caf1 localize to P-bodies."

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"Instead, Pan3 may modulate the activity of Pan2 poly (A) nuclease or link deadenylation to subsequent decay of the mRNA body."
PAN2 affects ASF1A
1 1 | 23 13
PAN2 binds ASF1A.
1 | 2 13
1 | 2 13

sparser
"Histone chaperone ASF1A is physically associated with USP52."

sparser
"To confirm the in vivo association of ASF1A with USP52, co-immunoprecipitation experiments were performed and the results showed that USP52 was efficiently co-immunoprecipitated with ASF1A, and vice versa (Fig.  xref )."

sparser
"In vivo deubiquitination assays showed an evident decrease in the polyubiquitination level of all ASF1A mutants except for K129R (Fig.  xref and Supplementary Fig.  xref ), while the association of USP52 with all ASF1A mutants was comparable to that of USP52 with wild-type ASF1A (Supplementary Fig.  xref )."

sparser
"These results support the observation that ASF1A is physically associated with USP52 in vivo and suggest that ASF1A interacts with USP52 in cytoplasm."

sparser
"Here we report that ASF1A is physically associated with USP52, which is previously identified as a pseudo-deubiquitinase."

sparser
"Our findings suggest that inhibition of the enzymatic activity of USP52 or disruption of the association of USP52 with ASF1A, combined with chemo- or radio-therapy, could potentially improve the treatment of breast cancer."

sparser
"To gain further support of the in vivo interaction between ASF1A and USP52, protein fractionation experiments with FLAG-ASF1A affinity eluates were carried out."

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"Collectively, these results indicate that ASF1A interacts with USP52 through the N-terminal region of ASF1A and the WD40 repeat domain of USP52."

sparser
"Moreover, the reduction in ASF1A protein level associated with USP52 depletion was probably through a proteasome-mediated protein degradation mechanism, as the effect could be effectively blocked by a proteasome specific inhibitor, MG132 (Fig.  xref )."

sparser
"Immunoprecipitation analysis revealed that USP52 is preferentially associated with ASF1A in the S phase of the cell cycle, when ASF1A transfers H3.1–H4 dimer to replicating chromatin."
PAN2 activates ASF1A.
| 15
PAN2 activates ASF1A. 10 / 15
| 15

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"USP52 promoted ASF1A stabilization facilitates chromatin assembly and favors cell cycle progression."

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"These results favor the argument that USP52 promoted ASF1A stabilization regulates DNA synthesis coupled chromatin assembly through ASF1A mediated deposition of H3K56Ac."

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"Taken together, these data indicate that USP52 targets ASF1A and K129 for deubiquitination and USP52 is a bona fide deubiquitinase for ASF1A."

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"In light of our observation that USP52 mediated ASF1A stabilization regulates the level of H3K56Ac, it is reasonable to postulate that USP52 and ASF1A signaling pathway plays a role in tumorigenesis."

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"These results are in favor of the role of USP52 promoted ASF1A stabilization in chromatin assembly thus cell cycle progression, and indicate that USP52 and ASF1A axis is required for breast cancer cell proliferation."

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"To corroborate the role of USP52 promoted ASF1A stabilization in chromatin replication, cellular extracts from cells used in MNase digestion assays were collected and analyzed by western blotting."

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"USP52 acts as a deubiquitinase and promotes histone chaperone ASF1A stabilization."

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"Considering that ASF1A also plays an important role in replication independent chromatin assembly and chromatin disassembly during transcriptional activation XREF_BIBR, XREF_BIBR, XREF_BIBR, it is interesting to investigate whether USP52 promoted ASF1A stabilization plays a role in these processes."

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"Collectively, these results point a role of the USP52 promoted ASF1A stabilization in promoting breast carcinogenesis."

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"Collectively, these observations suggest that USP52 promoted ASF1A stabilization is potentially associated with breast carcinogenesis."
PAN2 deubiquitinates ASF1A.
1 | 4
PAN2 deubiquitinates ASF1A. 5 / 5
1 | 4

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"Interestingly, we demonstrate that USP52 is a bona fide ubiquitin specific protease, and USP52 promotes ASF1A deubiquitination and stabilization."

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"Since ASF1A is reported as a ubiquitinated protein 49, we then asked whether USP52 functions to deubiquitinate ASF1A."

"Additionally, we find that USP52 is overexpressed in breast carcinomas, and its level of expression correlates with that of ASF1A."

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"USP52 deubiquitinates ASF1A."

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"Nevertheless, our study identified that USP52 is a bona fide USP, and revealed that USP52 deubiquitinates and stabilizes histone chaperone ASF1A."
PAN2 inhibits ASF1A.
| 1
PAN2 inhibits ASF1A. 1 / 1
| 1

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"Moreover, we reveal that impairment of USP52 promoted ASF1A stabilization results in growth arrest of breast cancer cells and sensitizes these cells to DNA damage."
PAN2 increases the amount of ASF1A.
| 1
Modified PAN2 increases the amount of ASF1A. 1 / 1
| 1

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"Next, we found overexpression of USP52 was able to restore the expression of ASF1A in USP52 deficient cells."
ASF1A affects PAN2
1 | 5 13
ASF1A binds PAN2.
1 | 2 13
1 | 2 13

sparser
"Histone chaperone ASF1A is physically associated with USP52."

sparser
"To confirm the in vivo association of ASF1A with USP52, co-immunoprecipitation experiments were performed and the results showed that USP52 was efficiently co-immunoprecipitated with ASF1A, and vice versa (Fig.  xref )."

sparser
"In vivo deubiquitination assays showed an evident decrease in the polyubiquitination level of all ASF1A mutants except for K129R (Fig.  xref and Supplementary Fig.  xref ), while the association of USP52 with all ASF1A mutants was comparable to that of USP52 with wild-type ASF1A (Supplementary Fig.  xref )."

sparser
"These results support the observation that ASF1A is physically associated with USP52 in vivo and suggest that ASF1A interacts with USP52 in cytoplasm."

sparser
"Here we report that ASF1A is physically associated with USP52, which is previously identified as a pseudo-deubiquitinase."

sparser
"Our findings suggest that inhibition of the enzymatic activity of USP52 or disruption of the association of USP52 with ASF1A, combined with chemo- or radio-therapy, could potentially improve the treatment of breast cancer."

sparser
"To gain further support of the in vivo interaction between ASF1A and USP52, protein fractionation experiments with FLAG-ASF1A affinity eluates were carried out."

reach
"Collectively, these results indicate that ASF1A interacts with USP52 through the N-terminal region of ASF1A and the WD40 repeat domain of USP52."

sparser
"Moreover, the reduction in ASF1A protein level associated with USP52 depletion was probably through a proteasome-mediated protein degradation mechanism, as the effect could be effectively blocked by a proteasome specific inhibitor, MG132 (Fig.  xref )."

sparser
"Immunoprecipitation analysis revealed that USP52 is preferentially associated with ASF1A in the S phase of the cell cycle, when ASF1A transfers H3.1–H4 dimer to replicating chromatin."
ASF1A activates PAN2.
| 3
ASF1A activates PAN2. 3 / 3
| 3

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"Indeed, USP52 deficiency impaired chromatin assembly and DNA replication as well as S-phase progression, the effect of which could be largely restored by ASF1A gain of function."

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"Meanwhile, western blotting analysis revealed that the upregulation of H3K56Ac trigged by IR was disrupted upon USP52 depletion, the effect of which could be restored by ASF1A gain of function."

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"Taken together, these data indicate that USP52 targets ASF1A and K129 for deubiquitination and USP52 is a bona fide deubiquitinase for ASF1A."
PAN2 is modified
3 | 15
PAN2 is phosphorylated. 10 / 12
| 12

sparser
"To further analyze the role of USP52 phosphorylation in regulating DNA end resection and HR, we re-expressed WT USP52 and USP52 S1003A mutant in USP52-deficient cells to compare their biological functions."

sparser
"These results suggest that USP52 phosphorylation by ATM is important for its role in regulating DNA end resection and HR through regulating CtIP deubiquitination."

sparser
"To further investigate the biological significance of USP52 phosphorylation, we compared the activities of WT USP52 and the S1003A mutant after DNA damage by in vitro deubiquitination assays."

sparser
"Because the interaction between CtIP and USP52 was not changed before or after IR treatment, it is possible that the phosphorylation of USP52 increases its catalytic capability but not the affinity toward CtIP."

sparser
"As shown in Supplementary Fig.  xref , xref , reconstitution of USP52-deficient cells with WT USP52 but not USP52 S1003A rescued USP52 depletion-induced defects, including CHK1 and RPA2 phosphorylation and IR and PARPi response, suggesting that USP52 phosphorylation by ATM is important for proper DDR."

sparser
"Ccr4, Pan2, and Pan3 were phosphorylated in GlyLac medium, suggesting that the activities of Ccr4, Pan2, and Pan3 may be regulated by phosphorylation in response to change of carbon sources."

sparser
"As shown in Fig.  xref , CtIP ubiquitination level was significantly decreased in cells expressing WT USP52 but not the S1003A mutant after IR treatment, suggesting that USP52 phosphorylation is critical for deubiquitinating CtIP following IR exposure."

sparser
"We next examined which SQ/TQ site of USP52 was phosphorylated and found that the S1003A but not S469A mutation mostly abolished the phosphorylation of USP52 after DNA damage (Fig.  xref and Supplementary Fig.  xref ), suggesting that USP52 is phosphorylated on Ser-1003 in an ATM-dependent manner following IR treatment."

sparser
"We hypothesized that ATM-mediated phosphorylation of USP52 activates its DUB activity."

sparser
"As shown in Fig.  xref , incubating WT, but not the S1003A mutant of USP52, with ATM further decreased the ubiquitination level of CtIP, suggesting that ATM-mediated USP52 phosphorylation is important for USP52 activation to deubiquitinate CtIP following DNA damage."
PAN2 is phosphorylated on S1003. 3 / 3
| 3

sparser
"These results suggest that phosphorylation of USP52 S1003 plays a vital role in regulating the DUB activity of USP52."

sparser
"To further examine whether the phosphorylation of USP52 at S1003 regulates CtIP deubiquitination, we reconstituted WT or the S1003A mutants in USP52-deficient cells and examined the ubiquitination level of CtIP with or without IR treatment."

sparser
"We next examined which SQ/TQ site of USP52 was phosphorylated and found that the S1003A but not S469A mutation mostly abolished the phosphorylation of USP52 after DNA damage (Fig.  xref and Supplementary Fig.  xref ), suggesting that USP52 is phosphorylated on Ser-1003 in an ATM-dependent manner following IR treatment."
PAN2 is phosphorylated on S1189. 2 / 2
2 |

No evidence text available

No evidence text available
PAN2 is phosphorylated on S791. 1 / 1
1 |

No evidence text available
PAN2 affects HIF1A
| 1 9 1
PAN2 activates HIF1A.
| 1 6
PAN2 activates HIF1A. 7 / 7
| 1 6

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"To rule out any effects of USP52 on HIF1A translation, we performed polysome profiling on U2OS cells treated with either NT or USP52 siRNA."

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"Disrupting USP52 containing P-bodies by GW182 depletion reduces HIF1A mRNA."

eidos
"USP52 increases HIF-1alpha protein levels through stabilizing HIF-1alpha mRNA instead of affecting HIF-1alpha ubiquitination [ 69,84 ] ."

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"During a screening of mediators for HIF1A mediated hypoxic response, USP52 and PAN2, a component of P-bodies, was found to promote the stability of HIF1A mRNA in 3 ' UTR dependent manner, as documented with the use of knockdown experiments.156 However, the direct binding of this protein to AREs was not studied, and interactions with de facto RPBs, such as TTP, can possibly happen in P-bodies."

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"To investigate further the role of USP52in the HIF1A mediated hypoxic response, U2OS cells were treated with individual USP52 siRNA duplexes 1 and 3 and exposed to hypoxia."

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"This demonstrates that USP52 knockdown specifically reduces HIF1A mRNA abundance, and supports the previous observation that decreased HIF1A mRNA is associated with up-regulation of HIF2A [XREF_BIBR]."

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"To obtain insight into the observed USP52 mediated stabilization of HIF1A mRNA, we performed proteomic analysis of USP52 immunoprecipitates to identify new USP52 associated proteins."
PAN2 inhibits HIF1A.
| 2
PAN2 inhibits HIF1A. 2 / 3
| 2

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"Depletion of USP52 reduced HIF1A mRNA and protein levels and resulted in reduced expression of HIF1A regulated hypoxic targets due to a 3 '-UTR (untranslated region)-dependent poly (A)-tail-length-independent destabilization in HIF1A mRNA."

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"To address whether USP52 negatively regulates HIF1A protein through interactions with the VHL complex, U2OS cells were treated with MLN4924 [XREF_BIBR] to inhibit the NEDD8 (neural-precursor-cell-expressed developmentally down-regulated 8)-interacting enzyme and block VHL activity."
PAN2 increases the amount of HIF1A.
| 1
PAN2 increases the amount of HIF1A. 1 / 3
| 1

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"USP52 increases HIF-1alpha protein levels through stabilizing HIF-1alpha mRNA instead of affecting HIF-1alpha ubiquitination [XREF_BIBR, XREF_BIBR]."
PAN2 binds HIF1A.
| 1
| 1

sparser
"In order to determine whether the effect of USP52 depletion on HIF1A mRNA stability was associated with a change in HIF1A poly(A) tail length, we analysed poly(A) tail length in U2OS cells treated with NT or USP52 siRNA."
PABPC1 affects PAN2
3 2 | 5 2
PABPC1 binds PAN2.
3 2 | 2 2
3 1 | 2 1

No evidence text available

No evidence text available

No evidence text available

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"FLAG-PABPC1 seems to have the same function as that of endogenous PAPBC1, and the indirect binding between PABPC1 and PAN2 or AGO2 is partially RNA dependent."

No evidence text available

sparser
"Mangus et al. have shown that Pbp1 negatively regulates Pan2 deadenylase by disturbing the Pab1-Pan2 interaction, and that the cell extract from pbp1Δ single mutant in the stationary phase has stronger deadenylase activity than that in WT in vitro [ xref , xref ]."

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"However, in the RNase A treatment group, the amounts of co-IPed AGO2 and PAN2 were partially reduced, which means that the interactions between PABPC1, AGO2, and PAN2 are partially dependent on RNA molecules."
| 1

sparser
"At the oligomerization interface between the second and third Pab1, the RNP interacts with the WD40 domain of Pan2 at a conserved surface of the base of the β-propeller ( xref A and xref A)."
PAN2 binds PAN3 and PABPC1. 1 / 1
1 |

No evidence text available
PABPC1 activates PAN2.
| 2
PABPC1 activates PAN2. 2 / 2
| 2

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"Because Pab1 stimulates Pan2 and interacts directly with Pan3 through its C-terminal region, an alternative interpretation could be that removal of the corresponding Pab1 domain inhibits deadenylation by preventing Pan2 action."

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"Since Pab1 promotes Pan2 activity, one model is that this deadenylation reflects Pab1 bound to the first ~ 65 residues of the A tail, but the 3 ' most region is exposed and thereby rapidly deadenylated by Pan2."
PABPC1 inhibits PAN2.
| 1
PABPC1 inhibits PAN2. 1 / 1
| 1

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"Because Pab1 stimulates Pan2 and interacts directly with Pan3 through its C-terminal region, an alternative interpretation could be that removal of the corresponding Pab1 domain inhibits deadenylation by preventing Pan2 action."
CNOT7 affects PAN2
| 3 9
CNOT7 binds PAN2.
| 2 9
CNOT7 binds PAN2, PAN3, and ccr4. 6 / 6
| 6

sparser
"Additionally, Pan2-Pan3 can form a super complex with Ccr4-Caf1, which provides an opportunity to coordinate the two phases of deadenylation [ xref ]."

sparser
"Since ARE/ARE-BP complexes have not yet been reported to directly interact with either the Pan2-Pan3 or Ccr4-Caf1 complex, one possibility is that the binding of ARE-BPs to AREs may interfere with the interaction between the 5′ cap/eIF4F complex and the 3′ poly(A)/PABP complex, thus preventing the formation of a closed-loop structure ( xref )."

sparser
"Although Pan3 and Caf1 associate with Pan2 and Ccr4 poly(A) nucleases, respectively ( xref ; xref ; xref ; xref ; xref ), their in vivo roles in mammalian mRNA turnover remain unclear."

sparser
"It appears that these two proteins do not directly interact with Pan2-Pan3 or the Ccr4-Caf1 deadenylase complex."

sparser
"The notion that the Pan2Pan3 and Ccr4Caf1 complexes can associate with each other was further confirmed by the results showing that Pan3-V5, endogenous Caf1, and a modest amount of endogenous PABP were coprecipitated with HA-Pan2 by an anti-HA antibody when HA-Pan2 and Pan3-V5 were coexpressed ( xref )."

sparser
"Pan2Pan3 and Ccr4Caf1 complexes can interact with each other in vivo."
| 2 2

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"Therefore, Pan2-Pan3 and Ccr4-Caf1 complexes may communicate with each other in vivo via the interaction between Pan2 and Caf1."

sparser
"However, when HA-Pan2 was ectopically expressed alone ( xref ), endogenous Caf1, but not PABP, was coprecipitated with HA-Pan2, indicating a specific interaction between Pan2 and Caf1, either directly or indirectly."

sparser
"Therefore, Pan2–Pan3 and Ccr4–Caf1 complexes may communicate with each other in vivo via the interaction between Pan2 and Caf1."

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"Although Pan3 and Caf1 associate with Pan2 and Ccr4 poly (A) nucleases, respectively, their in vivo roles in mammalian mRNA turnover remain unclear."
CNOT7 binds PAN2, PAN3, nuclease, and ccr4. 1 / 1
| 1

sparser
"Collectively, our data support that Pan2Pan3 and Ccr4Caf1 poly(A) nuclease complexes can associate with each other to form a supercomplex in vivo."
CNOT7 inhibits PAN2.
| 1
CNOT7 inhibits PAN2. 1 / 1
| 1

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"PAN2 depletion, like CAF1 depletion, did not cause an increase in steady-state levels of these mRNAs (XREF_FIG and E, and data not shown)."
Ccr4 affects PAN2
| 10
CNOT7 binds PAN2, PAN3, and ccr4. 6 / 6
| 6

sparser
"Additionally, Pan2-Pan3 can form a super complex with Ccr4-Caf1, which provides an opportunity to coordinate the two phases of deadenylation [ xref ]."

sparser
"Since ARE/ARE-BP complexes have not yet been reported to directly interact with either the Pan2-Pan3 or Ccr4-Caf1 complex, one possibility is that the binding of ARE-BPs to AREs may interfere with the interaction between the 5′ cap/eIF4F complex and the 3′ poly(A)/PABP complex, thus preventing the formation of a closed-loop structure ( xref )."

sparser
"Although Pan3 and Caf1 associate with Pan2 and Ccr4 poly(A) nucleases, respectively ( xref ; xref ; xref ; xref ; xref ), their in vivo roles in mammalian mRNA turnover remain unclear."

sparser
"It appears that these two proteins do not directly interact with Pan2-Pan3 or the Ccr4-Caf1 deadenylase complex."

sparser
"The notion that the Pan2Pan3 and Ccr4Caf1 complexes can associate with each other was further confirmed by the results showing that Pan3-V5, endogenous Caf1, and a modest amount of endogenous PABP were coprecipitated with HA-Pan2 by an anti-HA antibody when HA-Pan2 and Pan3-V5 were coexpressed ( xref )."

sparser
"Pan2Pan3 and Ccr4Caf1 complexes can interact with each other in vivo."
PAN2 binds PAN3 and ccr4. 1 / 1
| 1

sparser
"Interestingly, interactions between Pan2-Pan3 and Ccr4-Not can be detected suggesting that both deadenylase complexes can reside in a higher order complex that may include other components ( xref )."
BLNK binds PAN2, exonuclease, and ccr4. 1 / 1
| 1

sparser
"Caf1 is a DEDD-family exonuclease in the Ccr4–Not complex with structural homology with the Pan2 exonuclease domain."
PAN2 binds PAN3, exonuclease, and ccr4. 1 / 1
| 1

sparser
"Of note, Ago2 is also known to regulate mRNA silencing through interacting with exonuclease complexes, the Ccr4-Not and Pan2-Pan3 complexes xref , in a miRNA-independent manner, which likely contributes to suppression of protein translation and energy metabolism in the liver."
CNOT7 binds PAN2, PAN3, nuclease, and ccr4. 1 / 1
| 1

sparser
"Collectively, our data support that Pan2Pan3 and Ccr4Caf1 poly(A) nuclease complexes can associate with each other to form a supercomplex in vivo."
PAN2 affects PABPC1
3 2 | 2 2
3 1 | 2 1

No evidence text available

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reach
"FLAG-PABPC1 seems to have the same function as that of endogenous PAPBC1, and the indirect binding between PABPC1 and PAN2 or AGO2 is partially RNA dependent."

No evidence text available

sparser
"Mangus et al. have shown that Pbp1 negatively regulates Pan2 deadenylase by disturbing the Pab1-Pan2 interaction, and that the cell extract from pbp1Δ single mutant in the stationary phase has stronger deadenylase activity than that in WT in vitro [ xref , xref ]."

reach
"However, in the RNase A treatment group, the amounts of co-IPed AGO2 and PAN2 were partially reduced, which means that the interactions between PABPC1, AGO2, and PAN2 are partially dependent on RNA molecules."
| 1

sparser
"At the oligomerization interface between the second and third Pab1, the RNP interacts with the WD40 domain of Pan2 at a conserved surface of the base of the β-propeller ( xref A and xref A)."
PAN2 binds PAN3 and PABPC1. 1 / 1
1 |

No evidence text available
TFDP1 affects PAN2
8 |
TFDP1 decreases the amount of PAN2. 8 / 8
8 |

No evidence text available

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Ccr4 affects CNOT7
| 7
CNOT7 binds PAN2, PAN3, and ccr4. 6 / 6
| 6

sparser
"Additionally, Pan2-Pan3 can form a super complex with Ccr4-Caf1, which provides an opportunity to coordinate the two phases of deadenylation [ xref ]."

sparser
"Since ARE/ARE-BP complexes have not yet been reported to directly interact with either the Pan2-Pan3 or Ccr4-Caf1 complex, one possibility is that the binding of ARE-BPs to AREs may interfere with the interaction between the 5′ cap/eIF4F complex and the 3′ poly(A)/PABP complex, thus preventing the formation of a closed-loop structure ( xref )."

sparser
"Although Pan3 and Caf1 associate with Pan2 and Ccr4 poly(A) nucleases, respectively ( xref ; xref ; xref ; xref ; xref ), their in vivo roles in mammalian mRNA turnover remain unclear."

sparser
"It appears that these two proteins do not directly interact with Pan2-Pan3 or the Ccr4-Caf1 deadenylase complex."

sparser
"The notion that the Pan2Pan3 and Ccr4Caf1 complexes can associate with each other was further confirmed by the results showing that Pan3-V5, endogenous Caf1, and a modest amount of endogenous PABP were coprecipitated with HA-Pan2 by an anti-HA antibody when HA-Pan2 and Pan3-V5 were coexpressed ( xref )."

sparser
"Pan2Pan3 and Ccr4Caf1 complexes can interact with each other in vivo."
CNOT7 binds PAN2, PAN3, nuclease, and ccr4. 1 / 1
| 1

sparser
"Collectively, our data support that Pan2Pan3 and Ccr4Caf1 poly(A) nuclease complexes can associate with each other to form a supercomplex in vivo."
PAN2 affects RBBP8
| 2 5
PAN2 binds RBBP8.
| 1 5
| 1 5

reach
"USP52 directly interacts with and deubiquitylates CtIP to promote DNA end resection and HR [118]."

sparser
"As shown in Fig.  xref , the N-terminal region (AA17–AA160) of CtIP and the WD40 domain of USP52 are indispensable for the interaction between CtIP and USP52."

sparser
"Interestingly, the interaction between USP52 and CtIP did not change with IR treatment (Supplementary Fig.  xref ), suggesting their interactions are not DNA damage inducible."

sparser
"This further confirms the interaction between USP52 and CtIP in cells."

sparser
"As shown in Supplementary Fig.  xref and Fig.  xref , WT USP52, but not the USP52 ΔWD40 truncate, successfully rescued DSB resection and HR in USP52-depleted cells, suggesting that the USP52CtIP interaction is important for the role of USP52 in DSB resection and HR."

sparser
"Because the interaction between CtIP and USP52 was not changed before or after IR treatment, it is possible that the phosphorylation of USP52 increases its catalytic capability but not the affinity toward CtIP."
PAN2 deubiquitinates RBBP8.
| 1
PAN2 deubiquitinates RBBP8. 1 / 1
| 1

reach
"USP52 directly interacts with and deubiquitylates CtIP to promote DNA end resection and HR [118]."
E2F1 affects PAN2
7 |
E2F1 decreases the amount of PAN2. 7 / 7
7 |

No evidence text available

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No evidence text available
CNOT7 affects ccr4
| 7
CNOT7 binds PAN2, PAN3, and ccr4. 6 / 6
| 6

sparser
"Additionally, Pan2-Pan3 can form a super complex with Ccr4-Caf1, which provides an opportunity to coordinate the two phases of deadenylation [ xref ]."

sparser
"Since ARE/ARE-BP complexes have not yet been reported to directly interact with either the Pan2-Pan3 or Ccr4-Caf1 complex, one possibility is that the binding of ARE-BPs to AREs may interfere with the interaction between the 5′ cap/eIF4F complex and the 3′ poly(A)/PABP complex, thus preventing the formation of a closed-loop structure ( xref )."

sparser
"Although Pan3 and Caf1 associate with Pan2 and Ccr4 poly(A) nucleases, respectively ( xref ; xref ; xref ; xref ; xref ), their in vivo roles in mammalian mRNA turnover remain unclear."

sparser
"It appears that these two proteins do not directly interact with Pan2-Pan3 or the Ccr4-Caf1 deadenylase complex."

sparser
"The notion that the Pan2Pan3 and Ccr4Caf1 complexes can associate with each other was further confirmed by the results showing that Pan3-V5, endogenous Caf1, and a modest amount of endogenous PABP were coprecipitated with HA-Pan2 by an anti-HA antibody when HA-Pan2 and Pan3-V5 were coexpressed ( xref )."

sparser
"Pan2Pan3 and Ccr4Caf1 complexes can interact with each other in vivo."
CNOT7 binds PAN2, PAN3, nuclease, and ccr4. 1 / 1
| 1

sparser
"Collectively, our data support that Pan2Pan3 and Ccr4Caf1 poly(A) nuclease complexes can associate with each other to form a supercomplex in vivo."
RBBP8 affects PAN2
| 1 5
| 1 5

reach
"USP52 directly interacts with and deubiquitylates CtIP to promote DNA end resection and HR [118]."

sparser
"As shown in Fig.  xref , the N-terminal region (AA17–AA160) of CtIP and the WD40 domain of USP52 are indispensable for the interaction between CtIP and USP52."

sparser
"Interestingly, the interaction between USP52 and CtIP did not change with IR treatment (Supplementary Fig.  xref ), suggesting their interactions are not DNA damage inducible."

sparser
"This further confirms the interaction between USP52 and CtIP in cells."

sparser
"As shown in Supplementary Fig.  xref and Fig.  xref , WT USP52, but not the USP52 ΔWD40 truncate, successfully rescued DSB resection and HR in USP52-depleted cells, suggesting that the USP52CtIP interaction is important for the role of USP52 in DSB resection and HR."

sparser
"Because the interaction between CtIP and USP52 was not changed before or after IR treatment, it is possible that the phosphorylation of USP52 increases its catalytic capability but not the affinity toward CtIP."
CNOT7 affects PAN2, PAN3, and ccr4
| 6
CNOT7 binds PAN2, PAN3, and ccr4. 6 / 6
| 6

sparser
"Additionally, Pan2-Pan3 can form a super complex with Ccr4-Caf1, which provides an opportunity to coordinate the two phases of deadenylation [ xref ]."

sparser
"Since ARE/ARE-BP complexes have not yet been reported to directly interact with either the Pan2-Pan3 or Ccr4-Caf1 complex, one possibility is that the binding of ARE-BPs to AREs may interfere with the interaction between the 5′ cap/eIF4F complex and the 3′ poly(A)/PABP complex, thus preventing the formation of a closed-loop structure ( xref )."

sparser
"Although Pan3 and Caf1 associate with Pan2 and Ccr4 poly(A) nucleases, respectively ( xref ; xref ; xref ; xref ; xref ), their in vivo roles in mammalian mRNA turnover remain unclear."

sparser
"It appears that these two proteins do not directly interact with Pan2-Pan3 or the Ccr4-Caf1 deadenylase complex."

sparser
"The notion that the Pan2Pan3 and Ccr4Caf1 complexes can associate with each other was further confirmed by the results showing that Pan3-V5, endogenous Caf1, and a modest amount of endogenous PABP were coprecipitated with HA-Pan2 by an anti-HA antibody when HA-Pan2 and Pan3-V5 were coexpressed ( xref )."

sparser
"Pan2Pan3 and Ccr4Caf1 complexes can interact with each other in vivo."
ATM affects PAN2
| 6
ATM phosphorylates PAN2. 4 / 4
| 4

sparser
"We further evaluated whether USP52 phosphorylation by ATM affects CHK1 and RPA2 phosphorylation and render cells resistant to cancer therapy."

sparser
"These results suggest that USP52 phosphorylation by ATM is important for its role in regulating DNA end resection and HR through regulating CtIP deubiquitination."

sparser
"Phosphorylation of USP52 by ATM under IR treatment."

sparser
"As shown in Supplementary Fig.  xref , xref , reconstitution of USP52-deficient cells with WT USP52 but not USP52 S1003A rescued USP52 depletion-induced defects, including CHK1 and RPA2 phosphorylation and IR and PARPi response, suggesting that USP52 phosphorylation by ATM is important for proper DDR."
ATM phosphorylates PAN2 on S1003. 2 / 2
| 2

sparser
"Our results suggest that the phosphorylation of USP52 on Ser-1003 by ATM increases the activity of USP52 to deubiquitinate CtIP and promote DNA end resection and HR repair."

sparser
"In addition, USP52 is phosphorylated by ATM at Ser-1003 after DNA damage, which enhances the catalytic activity of USP52."
SFXN1 affects PAN2
| 5
| 5

sparser
"Therefore, we evaluated FPN expression by immunoblot (not detected in proteome) and demonstrated a decrease in expression in TCC-Pan2 and PANC-1 NCOA4 KD cells ( xref )."

sparser
"The xenografted PCa models have been studied using colon cancer (HCT-116, LS174T, HT29, SW480, SW620, LoVo, RKO, Caco-2, KM12, MDST8, HUTU80) [ xref , xref , xref , xref , xref ], pancreatic cancer (Panc-1, TCC-Pan2, BxPC3, AsPC-1) [ xref , xref , xref ], gastric cancer (60As6, HSC-44PE, HSC-58, MKN45-P) [ xref , xref , xref , xref , xref , xref , xref , xref , xref , xref , xref , xref , xref , xref ], and ovarian cancer (OVCAR3, OVCAR4, OVCAR5, OVCAR8, CAOV3, OVSAHO, OV2944-HM-1, SKOV-3) [ xref , xref , xref , xref ] cell lines."

sparser
"Intriguingly, LCN2 levels were also significantly elevated in TCC-Pan2 NCOA4 KD proteomes ( xref )."

sparser
"The xenografted PCa models have been studied using colon cancer (HCT-116, LS174T, HT29, SW480, SW620, LoVo, RKO, Caco-2, KM12, MDST8, HUTU80) [57] [58] [59] [60] [61] , pancreatic cancer (Panc-1, TCC-Pan2, BxPC3, AsPC-1) [62] [63] [64] , gastric cancer (60As6, HSC-44PE, HSC-58, MKN45-P) [56] [57] [58] [59] [60] [61] [62] [63] [64] [65] [66] [67] [68] [69] , and ovarian cancer (OVCAR3, OVCAR4, OVCAR5, OVCAR8, CAOV3, OVSAHO, OV2944-HM-1, SKOV-3) [59, [70] [71] [72] cell lines."

sparser
"To evaluate the potential for compensation of transferrin-mediated iron uptake to rescue proliferation, we tested TCC-Pan2 NCOA4 KD cells for rescue by holo-transferrin demonstrating a partial rescue ( xref )."
Pbp1 affects PAN2
| 4 1
Pbp1 inhibits PAN2.
| 3 1
Pbp1 inhibits PAN2. 4 / 4
| 3 1

sparser
"Further analysis should be needed to elucidate the physiological role of Pan2 inhibition by Pbp1 in the stationary phase."

reach
"Consistently, we found that the shortening of the LRG1 poly (A) tail length in the ccr4Delta pbp1Delta mutant required Pan2 deadenylase in vivo, and that Pbp1 inhibited Pan2 activity only in the stationary phase but not in the log phase."

reach
"Pbp1 negatively regulates Pan2 activity in the absence of Ccr4 in the stationary phase."

reach
"If Pan2 activity is inhibited by Pbp1, the LRG1 poly (A) tail length in the ccr4Delta pbp1Delta pan2Delta triple mutant would be longer than that in the ccr4Delta pbp1Delta double mutant in the stationary phase."
Pbp1 binds PAN2.
| 1
| 1

reach
"29 Furthermore, the poly (A)-nuclease subunit Pan2 binds to Pbp1, 27 and the poly (A)-polymerase binding proteins Fir1 and Ufd1 interact with Pbp1 and have also been implicated in processing the 3 '-e[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
PAN2 affects SFXN1
| 5
| 5

sparser
"Therefore, we evaluated FPN expression by immunoblot (not detected in proteome) and demonstrated a decrease in expression in TCC-Pan2 and PANC-1 NCOA4 KD cells ( xref )."

sparser
"The xenografted PCa models have been studied using colon cancer (HCT-116, LS174T, HT29, SW480, SW620, LoVo, RKO, Caco-2, KM12, MDST8, HUTU80) [ xref , xref , xref , xref , xref ], pancreatic cancer (Panc-1, TCC-Pan2, BxPC3, AsPC-1) [ xref , xref , xref ], gastric cancer (60As6, HSC-44PE, HSC-58, MKN45-P) [ xref , xref , xref , xref , xref , xref , xref , xref , xref , xref , xref , xref , xref , xref ], and ovarian cancer (OVCAR3, OVCAR4, OVCAR5, OVCAR8, CAOV3, OVSAHO, OV2944-HM-1, SKOV-3) [ xref , xref , xref , xref ] cell lines."

sparser
"Intriguingly, LCN2 levels were also significantly elevated in TCC-Pan2 NCOA4 KD proteomes ( xref )."

sparser
"The xenografted PCa models have been studied using colon cancer (HCT-116, LS174T, HT29, SW480, SW620, LoVo, RKO, Caco-2, KM12, MDST8, HUTU80) [57] [58] [59] [60] [61] , pancreatic cancer (Panc-1, TCC-Pan2, BxPC3, AsPC-1) [62] [63] [64] , gastric cancer (60As6, HSC-44PE, HSC-58, MKN45-P) [56] [57] [58] [59] [60] [61] [62] [63] [64] [65] [66] [67] [68] [69] , and ovarian cancer (OVCAR3, OVCAR4, OVCAR5, OVCAR8, CAOV3, OVSAHO, OV2944-HM-1, SKOV-3) [59, [70] [71] [72] cell lines."

sparser
"To evaluate the potential for compensation of transferrin-mediated iron uptake to rescue proliferation, we tested TCC-Pan2 NCOA4 KD cells for rescue by holo-transferrin demonstrating a partial rescue ( xref )."
PAN2 affects NLRP6
| 5
| 5

reach
"The miRNA- Argonaute family complex recruits the CCR4-NOT complex or the PAN2-PAN3 complex, leading to degradation of target mRNAs (64, 65)."

reach
"It is not only thought to facilitate interactions between the 5′ and 3′ ends of mRNP molecules (via its interaction with eIF4G; 20,21) but is also believed to modulate deadenylation via its interactions with the Pan2Pan3 complex 23."

reach
"As the heart of RISC, Argonaute2 (Ago2) recruits TNRC6, PABPC, and deadenylase complexes, i.e., the PAN2-PAN3 complex or CCR4-NOT complex to destabilize or repress mRNA [15–17]."

reach
"A recent cryoEM structure of the yeast Pan2-Pan3 complex provides an explanation for why it preferentially acts on the distal (not the proximal) poly(A) tail ."

reach
"Moreover, interactions between eIF4G and the poly[A]binding protein Pab1 are capable of mediating interactions between the 5′ and 3′ ends of mRNA 20, whereby Pab1 stimulates both translation initiation 21, 22 and deadenylation by the Pan2/Pan3 complex 23."
4 |
Valproic acid decreases the amount of PAN2. 4 / 4
4 |

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Bisphenol A affects PAN2
4 |
Bisphenol A decreases the amount of PAN2.
2 |
Bisphenol A decreases the amount of PAN2. 2 / 2
2 |

No evidence text available

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Bisphenol A methylates PAN2.
1 |
1 |

No evidence text available
Bisphenol A increases the amount of PAN2.
1 |
Bisphenol A increases the amount of PAN2. 1 / 1
1 |

No evidence text available
| 4

reach
"USP52 promoted ASF1A stabilization facilitates chromatin assembly and favors cell cycle progression."

reach
"USP52 promotes chromatin assembly through stabilizing ASF1A."

reach
"These results suggest that USP52 promotes chromatin assembly in an ASF1A dependent manner."

reach
"We reveal that USP52 promotes chromatin assembly through stabilizing ASF1A, and point a role of USP52 in breast carcinogenesis and cellular resistance of breast cancer cells to DNA damage."
PABP affects PAN2
| 4
PABP activates PAN2.
| 3
PABP activates PAN2. 2 / 2
| 2

reach
"PABP regulates deadenylation of mRNPs by binding Pan3 and stimulating Pan2 nuclease activity and interacting with GW182 [XREF_BIBR, XREF_BIBR, XREF_BIBR, XREF_BIBR] through a C-terminal motif that is removed by both viral proteinases."

reach
"PAN2 is activated by PABP in vitro XREF_BIBR."
PABP bound to PAN3 activates PAN2. 1 / 1
| 1

reach
"For example, PABP 's interaction with Pan3 enhances Pan2 nuclease activity."
PABP binds PAN2.
| 1
| 1

reach
"The modest amount of endogenous PABP in the precipitate (XREF_FIG) suggests an indirect association between HA-Pan2 and PABP, presumably mediated via Pan3-V5, as HA-Pan2 alone did not pull down PABP (XREF_FIG)."
Guanosine affects PAN2
| 1 2
| 1 1

sparser
"Caf1 shows strict specificity for poly(A) and is inhibited by all non-A nucleotides, whereas Pan2 is substantially inhibited only by guanosines at the end of a poly(A) tail ( xref )."

eidos
"Caf1 shows strict specificity for poly ( A ) and is inhibited by all non-A nucleotides , whereas Pan2 is substantially inhibited only by guanosines at the end of a poly ( A ) tail ( Fig. 3A , B ) ."
| 1

sparser
"To understand why guanosines inhibit Pan2, we soaked AAGGA or AAGGAA RNAs into Pan2 UCH-Exo crystals, which diffracted to 3.3 Å resolution ( xref )."
PAN2 affects RNAPII
| 3
PAN2 activates RNAPII. 3 / 3
| 3

reach
"Finally, although knockdown of Ccr4 alone did not impact the reduction of RNAPII promoter occupancy in muSOX expressing cells, co-depletion of both Ccr4 and Pan2 restored RNAPII occupancy at the Gapdh promoter (XREF_FIG)."

reach
"Finally, although knockdown of Ccr4 alone did not impact the reduction of RNAPII promoter occupancy in muSOX-expressing cells, co-depletion of both Ccr4 and Pan2 restored RNAPII occupancy at the Gapdh promoter (Figure 2E)."

reach
"Finally, although knockdown of Ccr4 alone did notimpact the reduction of RNAPII promoter occupancy in muSOX expressing cells, co-depletion of both Ccr4 and Pan2 restored RNAPII occupancy at the Gapdh promoter (XREF_FIG E)."
PAN2 affects NFkappaB
| 3
| 2

reach
"PAN2 also suppressed NF-kappaB induction resulting from overexpression of several adapter proteins and protein kinases involved in the TNF or IL-1 receptor signal transduction, including TRAF2, TRAF6, RIP, IRAK2, and NF-kappaB-inducing kinase as well as the IkappaB kinases IKKalpha and IKKbeta."

reach
"When expressed in HEK293 cells, PAN2 suppressed NF-kappaB induction by the cytokines tumor necrosis factor-alpha (TNFalpha) and interleukin-1beta (IL-1beta), suggesting that this protein operates at a point of convergence in these two cytokine signaling pathways."
PAN2 bound to CHUK inhibits NFkappaB. 1 / 1
| 1

reach
"On the other hand, PAN2 binds IKKalpha to reduce tumor necrosis factor (TNF)-alpha and IL-1beta-related NF-kappaB activation."
PAN2 affects MIA
| 3
| 3

sparser
"Increased expressions of PPARA1, ACAA1, FABP1, and FABP2 were detected in SNU-478 ampullary cancer cells compared to pancreatic cancer cells (Pan1 and MIA-Pan2) and gastric cancer cells (AGS) by qPCR (Supplementary Figure 2A-D)."

sparser
"Increased expressions of PPARA1, ACAA1, FABP1, and FABP2 were detected in SNU-478 ampullary cancer cells compared to pancreatic cancer cells (Pan1 and MIA-Pan2) and gastric cancer cells (AGS) by qPCR ( xref A-D)."

sparser
"Pancreatic cancer cell lines (Pan1 and MIA-Pan2), gastric cancer cell lines (AGS and MKN45), and a colon cancer cell line (HCT-116) were obtained from the Bioresource Collection and Research Center at the Food Industry Research and Development Institute (Hsinchu, Taiwan)."
PAN2 affects MARF1
1 | 1 1
1 | 1

reach
"Next, we tested whether MARF1 binds Pan2 and Pan3, components of the Pan2-Pan3 deadenylase complex, and found that they did not co-immunoprecipitate with MARF1."

No evidence text available
PAN2 binds MARF1 and PAN3. 1 / 1
| 1

sparser
"Next, we tested whether MARF1 binds Pan2 and Pan3, components of the Pan2Pan3 deadenylase complex, and found that they did not co-immunoprecipitate with MARF1 (Supplementary Fig.  xref , D)."
PAN2 affects LRG1
| 3
PAN2 decreases the amount of LRG1.
| 2
Modified PAN2 decreases the amount of LRG1. 2 / 2
| 2

reach
"However, the overexpression of PAN2 did not reduce Lrg1 level in the ccr4Delta background in the stationary phase (XREF_FIG)."

reach
"On the other hand, overexpression of PAN2 had little effect on LRG1 poly (A) tail length and did not reduce Lrg1 protein level in the ccr4Delta mutant."
PAN2 inhibits LRG1.
| 1
PAN2 inhibits LRG1. 1 / 1
| 1

reach
"PAN2 overexpression partially decreased LRG1 poly (A) tail length (XREF_FIG, lane 3)."
MIA affects PAN2
| 3
| 3

sparser
"Increased expressions of PPARA1, ACAA1, FABP1, and FABP2 were detected in SNU-478 ampullary cancer cells compared to pancreatic cancer cells (Pan1 and MIA-Pan2) and gastric cancer cells (AGS) by qPCR (Supplementary Figure 2A-D)."

sparser
"Increased expressions of PPARA1, ACAA1, FABP1, and FABP2 were detected in SNU-478 ampullary cancer cells compared to pancreatic cancer cells (Pan1 and MIA-Pan2) and gastric cancer cells (AGS) by qPCR ( xref A-D)."

sparser
"Pancreatic cancer cell lines (Pan1 and MIA-Pan2), gastric cancer cell lines (AGS and MKN45), and a colon cancer cell line (HCT-116) were obtained from the Bioresource Collection and Research Center at the Food Industry Research and Development Institute (Hsinchu, Taiwan)."
MARF1 affects PAN2
1 | 1 1
1 | 1

reach
"Next, we tested whether MARF1 binds Pan2 and Pan3, components of the Pan2-Pan3 deadenylase complex, and found that they did not co-immunoprecipitate with MARF1."

No evidence text available
PAN2 binds MARF1 and PAN3. 1 / 1
| 1

sparser
"Next, we tested whether MARF1 binds Pan2 and Pan3, components of the Pan2Pan3 deadenylase complex, and found that they did not co-immunoprecipitate with MARF1 (Supplementary Fig.  xref , D)."
FUS affects PAN2
| 3
FUS inhibits PAN2.
| 2
FUS inhibits PAN2. 2 / 2
| 2

reach
"These data suggest that FUS sequesters PAN2 on PABPC1 and prevents it from deadenylating the poly (A) tail of the bound mRNA (XREF_SUPPLEMENTARY)."

reach
"These data suggest that FUS might sequester PAN2 on the PABP from attacking the poly (A) tail."
FUS binds PAN2.
| 1
| 1

reach
"Moreover, CPSF6 and PAN2 interacted with FUS both in the presence and absence of RNase A, indicating that they form an RNA independent protein complex (XREF_FIG)."
Structure affects PAN2
| 2
Structure activates PAN2. 2 / 2
| 2

eidos
"Together , our data show that the intrinsic single-stranded helix of poly ( A ) is exploited by Pan2 for specificity and recognition , and that disruption of this structure is sufficient to inhibit Pan2 ( Fig. 6A ) ."

eidos
"Our biochemical , biophysical , and structural investigations suggest that poly ( A ) forms an intrinsic base-stacked , single-stranded helical conformation that is recognized by Pan2 , and that disruption of this structure inhibits both Pan2 and Caf1 ."
2 |
Pirinixic acid increases the amount of PAN2.
1 |
Pirinixic acid increases the amount of PAN2. 1 / 1
1 |

No evidence text available
Pirinixic acid activates PAN2.
1 |
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Phenylmercury acetate decreases the amount of PAN2. 2 / 2
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No evidence text available

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Exonuclease affects ccr4
| 2
BLNK binds PAN2, exonuclease, and ccr4. 1 / 1
| 1

sparser
"Caf1 is a DEDD-family exonuclease in the Ccr4–Not complex with structural homology with the Pan2 exonuclease domain."
PAN2 binds PAN3, exonuclease, and ccr4. 1 / 1
| 1

sparser
"Of note, Ago2 is also known to regulate mRNA silencing through interacting with exonuclease complexes, the Ccr4-Not and Pan2-Pan3 complexes xref , in a miRNA-independent manner, which likely contributes to suppression of protein translation and energy metabolism in the liver."
ZFP36 affects PAN2
2 |
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ZEB1 affects PAN2
2 |
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No evidence text available

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TNRC6C affects PAN2
2 |
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TFDP2 affects PAN2
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TFDP2 decreases the amount of PAN2. 2 / 2
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STAT5B affects PAN2
2 |
STAT5B decreases the amount of PAN2. 2 / 2
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No evidence text available

No evidence text available
RNPC3 affects PAN2
| 2
| 1

sparser
"At the oligomerization interface between the second and third Pab1, the RNP interacts with the WD40 domain of Pan2 at a conserved surface of the base of the β-propeller ( xref A and xref A)."
RNPC3 binds PAN2 and PAN3. 1 / 1
| 1

sparser
"We concluded that Pan2-Pan3 does not stably interact with short poly(A) RNPs containing a single Pab1 but requires longer poly(A) RNPs containing two or more Pab1 protomers."
RELA affects PAN2
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RELA decreases the amount of PAN2. 2 / 2
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RB1 affects PAN2
2 |
RB1 decreases the amount of PAN2. 2 / 2
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PLEC affects PAN2
2 |
2 |

No evidence text available

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| 2
PAN2 translocates. 1 / 1
| 1

reach
"It is therefore possible that GW182 recruits USP52 to P-bodies through interactions with PAN3 [XREF_BIBR]."
PAN2 translocates to the contact site. 1 / 1
| 1

reach
"We find no evidence that PAN2 recruits PAN1 to the GMC contact site via a direct or indirect physical interaction, but PAN2 interacts with itself."
PAN2 affects translation
| 2
PAN2 inhibits translation.
| 1
PAN2 bound to PAN3 inhibits translation. 1 / 1
| 1

reach
"In contrast, tethered PAN3 did not repress reporter expression (XREF_SUPPLEMENTARY), suggesting that the PAN2 and PAN3 complex can not repress translation in the absence of deadenylation."
PAN2 activates translation.
| 1
| 1

reach
"To rule out any effects of USP52 on HIF1A translation, we performed polysome profiling on U2OS cells treated with either NT or USP52 siRNA."
PAN2 affects exonuclease
| 2
BLNK binds PAN2, exonuclease, and ccr4. 1 / 1
| 1

sparser
"Caf1 is a DEDD-family exonuclease in the Ccr4–Not complex with structural homology with the Pan2 exonuclease domain."
PAN2 binds PAN3, exonuclease, and ccr4. 1 / 1
| 1

sparser
"Of note, Ago2 is also known to regulate mRNA silencing through interacting with exonuclease complexes, the Ccr4-Not and Pan2-Pan3 complexes xref , in a miRNA-independent manner, which likely contributes to suppression of protein translation and energy metabolism in the liver."

reach
"USP52 inhibits cell proliferation by stabilizing PTEN protein in non-small cell lung cancer."

reach
"This study demonstrates that USP52 inhibits cancer cell proliferation through downregulation of cyclin D1 as well as AKT/mTOR signaling pathway inhibition."
PAN2 affects ZFP36
2 |
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PAN2 affects ZEB1
2 |
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PAN2 affects TNRC6C
2 |
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PAN2 affects RNPC3
| 2
| 1

sparser
"At the oligomerization interface between the second and third Pab1, the RNP interacts with the WD40 domain of Pan2 at a conserved surface of the base of the β-propeller ( xref A and xref A)."
RNPC3 binds PAN2 and PAN3. 1 / 1
| 1

sparser
"We concluded that Pan2-Pan3 does not stably interact with short poly(A) RNPs containing a single Pab1 but requires longer poly(A) RNPs containing two or more Pab1 protomers."
PAN2 affects RNAPII promoter
| 2
PAN2 inhibits RNAPII promoter. 2 / 2
| 2

reach
"Conversely, our observation that knockdown of the Ccr4 and Pan2 deadenylases increased RNAPII promoter occupancy in uninfected cells suggests that decreased cytoplasmic decay stimulates transcription in mammalian cells."

reach
"Finally, although knockdown of Ccr4 alone did not impact the reduction of RNAPII promoter occupancy in muSOX-expressing cells, co-depletion of both Ccr4 and Pan2 restored RNAPII occupancy at the Gapdh promoter (Figure 2E)."
PAN2 affects PLEC
2 |
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No evidence text available

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PAN2 affects FLU
| 2
| 2

sparser
"We could not verify whether the one gene (Flu-pan2) detected by FilmArray RP in two “equivocal” samples were true positive."

sparser
"We could not verify whether the one gene (Flu-pan2) detected by FilmArray RP in two "equivocal" samples were true positive."
PAN2 affects CCT7
2 |
2 |

No evidence text available

No evidence text available
PAN2 affects AGO2
| 2
| 2

reach
"FLAG-PABPC1 seems to have the same function as that of endogenous PAPBC1, and the indirect binding between PABPC1 and PAN2 or AGO2 is partially RNA dependent."

reach
"However, in the RNase A treatment group, the amounts of co-IPed AGO2 and PAN2 were partially reduced, which means that the interactions between PABPC1, AGO2, and PAN2 are partially dependent on RNA molecules."
HNF4A affects PAN2
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HNF4A decreases the amount of PAN2. 2 / 2
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No evidence text available

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HMGA1 affects PAN2
1 1 |
HMGA1 decreases the amount of PAN2.
1 |
HMGA1 decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
HMGA1 binds PAN2.
1 |
1 |

No evidence text available
FLU affects PAN2
| 2
| 2

sparser
"We could not verify whether the one gene (Flu-pan2) detected by FilmArray RP in two “equivocal” samples were true positive."

sparser
"We could not verify whether the one gene (Flu-pan2) detected by FilmArray RP in two "equivocal" samples were true positive."
E2F4 affects PAN2
2 |
E2F4 decreases the amount of PAN2. 2 / 2
2 |

No evidence text available

No evidence text available
CNOT7 affects ETF1, PAN2, PAN3, ccr4, and eRF3
| 2
CNOT7 binds PAN2, PAN3, ETF1, ccr4, and eRF3. 2 / 2
| 2

sparser
"Interestingly, translation termination complexes eRF1-eRF3, Pan2-Pan3, and Caf1-Ccr4 competitively interact with polyadenylate-binding protein PABPC1."

sparser
"Recent studies showed that translation termination complexes eRF1eRF3, Pan2Pan3, and Caf1Ccr4 competitively bind to PABPC1via the PAM2 motifs of eRF3, Pan3, and Tob."
CCT7 affects PAN2
2 |
2 |

No evidence text available

No evidence text available
BZU2 affects PAN2
| 2
BZU2 activates PAN2. 2 / 2
| 2

reach
"We speculate that BZU2/ZmMUTE combines with additional unknown factors to activate P3 of the PAN2 promoter in vivo (Fig 7, S7 Fig and S8 Fig), by analogy to the observation that the DNA binding specificity of AtMUTE depends on its dimerization partner ICE1 or SCRM2 [37]."

reach
"Unexpectedly, yeast one-hybrid and EMSA data show that BZU2/ZmMUTE is not able to activate P3 of the promoter of PAN2 in vitro, but the ChIP-qPCR data indicate that BZU2/ZmMUTE can activate P3 of the PAN2 promoter in vivo."
AGO2 affects PAN2
| 2
| 2

reach
"FLAG-PABPC1 seems to have the same function as that of endogenous PAPBC1, and the indirect binding between PABPC1 and PAN2 or AGO2 is partially RNA dependent."

reach
"However, in the RNase A treatment group, the amounts of co-IPed AGO2 and PAN2 were partially reduced, which means that the interactions between PABPC1, AGO2, and PAN2 are partially dependent on RNA molecules."
Zinc atom affects PAN2
1 |
Zinc atom increases the amount of PAN2. 1 / 1
1 |

No evidence text available
Uracil affects PAN2
| 1
Uracil inhibits PAN2. 1 / 1
| 1

eidos
"The Stacked , Helical Structure of Poly ( A ) is Important in Deadenylation In vitro deadenylation assays showed that Pan2 was not strongly inhibited by uracils ( Us ) or cytosines ( Cs ) at the end of a poly ( A ) tail ( Fig. 3A , B ) , but these nucleotides did not show the characteristic CD signature of helical poly ( A ) , either alone ( Fig. 3E ) or in the context of oligo ( A ) ( Fig. 4A ) ."
Troglitazone affects PAN2
1 |
Troglitazone decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
Topotecan affects PAN2
1 |
Topotecan decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
Thapsigargin affects PAN2
1 |
Thapsigargin increases the amount of PAN2. 1 / 1
1 |

No evidence text available
Response to hypoxia affects PAN2
1 |
Response to hypoxia increases the amount of PAN2. 1 / 1
1 |

"from table 1 and table 2 in the full text:"
Quercetin affects PAN2
1 |
Quercetin increases the amount of PAN2. 1 / 1
1 |

No evidence text available
1 |

No evidence text available
Paracetamol affects PAN2
1 |
Paracetamol decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
Pan affects PAN2
| 1
| 1

reach
"HuR may modulate translation of several ARE-mRNAs by a process that is independent of ARE or 3 ' UTR, which involves binding of HuR to IRES in the 5 ' UTR.19, 20, 21 AREs mediate their effects on mRNA decay by first enhancing deadenylation (polyA shortening), a first step in mRNA decay facilitated by CCR4 and NOT and PAN2 and PAN complexes."
Oxaliplatin affects PAN2
1 |
Oxaliplatin decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
Nuclease affects ccr4
| 1
CNOT7 binds PAN2, PAN3, nuclease, and ccr4. 1 / 1
| 1

sparser
"Collectively, our data support that Pan2Pan3 and Ccr4Caf1 poly(A) nuclease complexes can associate with each other to form a supercomplex in vivo."
Methylmercury chloride decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
Methyl methanesulfonate increases the amount of PAN2. 1 / 1
1 |

No evidence text available
Jinfukang affects PAN2
1 |
Jinfukang increases the amount of PAN2. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-875-5p decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
Hsa-miR-8055 affects PAN2
1 |
Hsa-miR-8055 decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-770-5p decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-6864-3p decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-6826-3p decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-6782-3p decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-6756-3p decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-6726-3p decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
Hsa-miR-6131 affects PAN2
1 |
Hsa-miR-6131 decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-5587-5p decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
Hsa-miR-484 affects PAN2
1 |
Hsa-miR-484 decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-4764-3p decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-454-5p decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-4446-5p decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
Hsa-miR-4294 affects PAN2
1 |
Hsa-miR-4294 decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-377-5p decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
Hsa-miR-3672 affects PAN2
1 |
Hsa-miR-3672 decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-3663-5p decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-3155b decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-3155a decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-3144-3p decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-3127-3p decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-302b-5p decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-29a-3p decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-222-3p decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
1 |
Hsa-miR-1249-3p decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
Hexabromocyclododecane decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
HCG_1757335 affects PAN2
1 |
PAN2 binds hCG_1757335. 1 / 1
1 |

No evidence text available
Furan affects PAN2
1 |
Furan demethylates PAN2. 1 / 1
1 |

No evidence text available
Formaldehyde affects PAN2
1 |
Formaldehyde increases the amount of PAN2. 1 / 1
1 |

No evidence text available
Flutamide affects PAN2
1 |
Flutamide increases the amount of PAN2. 1 / 1
1 |

No evidence text available
Exonuclease affects PAN3
| 1
PAN2 binds PAN3, exonuclease, and ccr4. 1 / 1
| 1

sparser
"Of note, Ago2 is also known to regulate mRNA silencing through interacting with exonuclease complexes, the Ccr4-Not and Pan2-Pan3 complexes xref , in a miRNA-independent manner, which likely contributes to suppression of protein translation and energy metabolism in the liver."
Exonuclease affects BLNK
| 1
BLNK binds PAN2, exonuclease, and ccr4. 1 / 1
| 1

sparser
"Caf1 is a DEDD-family exonuclease in the Ccr4–Not complex with structural homology with the Pan2 exonuclease domain."
Endosulfan affects PAN2
1 |
Endosulfan decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
Dorsomorphin affects PAN2
1 |
Dorsomorphin decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
1 |
Diarsenic trioxide decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
Cytosine affects PAN2
| 1
| 1

eidos
"The Stacked , Helical Structure of Poly ( A ) is Important in Deadenylation In vitro deadenylation assays showed that Pan2 was not strongly inhibited by uracils ( Us ) or cytosines ( Cs ) at the end of a poly ( A ) tail ( Fig. 3A , B ) , but these nucleotides did not show the characteristic CD signature of helical poly ( A ) , either alone ( Fig. 3E ) or in the context of oligo ( A ) ( Fig. 4A ) ."
Cytoplasmic poly A binding protein PABPC1 is cofactor affects PAN2
| 1
Cytoplasmic poly A binding protein PABPC1 is cofactor activates PAN2. 1 / 1
| 1

eidos
"Poliovirus proteases also target and degrade a variety of cellular proteins , including the cytoplasmic poly ( A ) binding protein PABPC1 [ 47 ] , which is a cofactor that stimulates the Pan2 / 3 deadenylase ."
1 |
Cyclosporin A increases the amount of PAN2. 1 / 1
1 |

No evidence text available
Coumestrol affects PAN2
1 |
Coumestrol increases the amount of PAN2. 1 / 1
1 |

No evidence text available
1 |
Copper(II) sulfate decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
1 |
Cobalt dichloride decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
Ccr4 affects nuclease
| 1
CNOT7 binds PAN2, PAN3, nuclease, and ccr4. 1 / 1
| 1

sparser
"Collectively, our data support that Pan2Pan3 and Ccr4Caf1 poly(A) nuclease complexes can associate with each other to form a supercomplex in vivo."
Ccr4 affects BLNK
| 1
BLNK binds PAN2, exonuclease, and ccr4. 1 / 1
| 1

sparser
"Caf1 is a DEDD-family exonuclease in the Ccr4–Not complex with structural homology with the Pan2 exonuclease domain."
1 |
Carbon nanotube decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
Butanal affects PAN2
1 |
Butanal decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
Bis(2-ethylhexyl) phthalate decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
1 |
Benzo[a]pyrene increases the amount of PAN2. 1 / 1
1 |

No evidence text available
Base-stacking affects PAN2
| 1
Base-stacking activates PAN2. 1 / 1
| 1

eidos
"This supports the finding that disruption of base-stacking inhibits Pan2 , and that Pan2 requires its substrate to adopt a poly ( A ) - like stacked , helical conformation ."
Aflatoxin B1 affects PAN2
1 |
1 |

No evidence text available
Abrine affects PAN2
1 |
Abrine increases the amount of PAN2. 1 / 1
1 |

No evidence text available
ZmMUTE affects PAN2
| 1
ZmMUTE activates PAN2. 1 / 1
| 1

reach
"Unexpectedly, yeast one-hybrid and EMSA data show that BZU2/ZmMUTE is not able to activate P3 of the promoter of PAN2 in vitro, but the ChIP-qPCR data indicate that BZU2/ZmMUTE can activate P3 of the PAN2 promoter in vivo."
ZmMUTE combines affects PAN2
| 1
ZmMUTE combines activates PAN2. 1 / 1
| 1

reach
"We speculate that BZU2/ZmMUTE combines with additional unknown factors to activate P3 of the PAN2 promoter in vivo (Fig 7, S7 Fig and S8 Fig), by analogy to the observation that the DNA binding specificity of AtMUTE depends on its dimerization partner ICE1 or SCRM2 [37]."
ZNF234 affects PAN2
1 |
1 |

No evidence text available
YWHAE affects PAN2
1 |
1 |

No evidence text available
YUH1 affects PAN2
| 1
PAN2 binds YUH1 and EXO. 1 / 1
| 1

sparser
"The lack of base-specific interactions between Pan2 UCH-Exo and adenines was surprising given that Pan2 displayed strong specificity against guanosines ( xref )."
YES1 affects PAN2
1 |
1 |

No evidence text available
YBX3 affects PAN2
1 |
1 |

No evidence text available
YBX1 affects PAN2
1 |
1 |

No evidence text available
XRN2 affects PAN2
1 |
1 |

No evidence text available
VIM affects PAN2
1 |
1 |

No evidence text available
VDR affects PAN2
1 |
VDR decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
UBTD1 affects PAN2
1 |
1 |

No evidence text available
UACA affects PAN2
1 |
1 |

No evidence text available
TXN affects PAN2
1 |
1 |

No evidence text available
TUFM affects PAN2
1 |
1 |

No evidence text available
TUBB4B affects PAN2
1 |
1 |

No evidence text available
TUBB affects PAN2
1 |
1 |

No evidence text available
TUBA1B affects PAN2
1 |
1 |

No evidence text available
TUBA1A affects PAN2
1 |
1 |

No evidence text available
TRIM35 affects PAN2
1 |
1 |

No evidence text available
TRIM21 affects PAN2
1 |
1 |

No evidence text available
TPM4 affects PAN2
1 |
1 |

No evidence text available
TPM3P4 affects PAN2
1 |
1 |

No evidence text available
TPM3 affects PAN2
1 |
1 |

No evidence text available
TPM1 affects PAN2
1 |
1 |

No evidence text available
TP53 affects PAN2
1 |
1 |

No evidence text available
TOB2 affects PAN2
1 |
1 |

No evidence text available
TNRC6A affects PAN2
1 |
1 |

No evidence text available
TMOD3 affects PAN2
1 |
1 |

No evidence text available
TMOD2 affects PAN2
1 |
1 |

No evidence text available
TMOD1 affects PAN2
1 |
1 |

No evidence text available
TLX2 affects PAN2
1 |
TLX2 decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
TJP1 affects PAN2
1 |
1 |

No evidence text available
THRAP3 affects PAN2
1 |
1 |

No evidence text available
TFAM affects PAN2
1 |
1 |

No evidence text available
TET2 affects PAN2
1 |
1 |

No evidence text available
TCP1 affects PAN2
1 |
1 |

No evidence text available
TCOF1 affects PAN2
1 |
1 |

No evidence text available
SVIL affects PAN2
1 |
1 |

No evidence text available
STMN1 affects PAN2
1 |
1 |

No evidence text available
STK38L affects PAN2
1 |
1 |

No evidence text available
STING1 affects PAN2
1 |
1 |

No evidence text available
STAT5A affects PAN2
1 |
STAT5A decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
SSBP1 affects PAN2
1 |
1 |

No evidence text available
SRSF8 affects PAN2
1 |
1 |

No evidence text available
SRSF7 affects PAN2
1 |
1 |

No evidence text available
SRSF6 affects PAN2
1 |
1 |

No evidence text available
SRSF3 affects PAN2
1 |
1 |

No evidence text available
SRRM2 affects PAN2
1 |
1 |

No evidence text available
SRP14 affects PAN2
1 |
1 |

No evidence text available
SQSTM1 affects PAN2
1 |
1 |

No evidence text available
SPTBN1 affects PAN2
1 |
1 |

No evidence text available
SPTAN1 affects PAN2
1 |
1 |

No evidence text available
SPECC1L affects PAN2
1 |
1 |

No evidence text available
SP1 affects PAN2
1 |
SP1 decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
SOWAHA affects PAN2
1 |
1 |

No evidence text available
SNRPD2 affects PAN2
1 |
1 |

No evidence text available
SNRPD1 affects PAN2
1 |
1 |

No evidence text available
SNRPB affects PAN2
1 |
1 |

No evidence text available
SNRNP70 affects PAN2
1 |
1 |

No evidence text available
SMPDL3B affects PAN2
1 |
1 |

No evidence text available
SMN1 affects PAN2
1 |
1 |

No evidence text available
SH3BGRL2 affects PAN2
1 |
1 |

No evidence text available
SFPQ affects PAN2
1 |
1 |

No evidence text available
SF3B6 affects PAN2
1 |
1 |

No evidence text available
SF3A2 affects PAN2
1 |
1 |

No evidence text available
SERBP1 affects PAN2
1 |
1 |

No evidence text available
SEC16A affects PAN2
1 |
1 |

No evidence text available
SART1 affects PAN2
1 |
1 |

No evidence text available
RUVBL2 affects PAN2
1 |
1 |

No evidence text available
RRP1 affects PAN2
1 |
1 |

No evidence text available
RRAS2 affects PAN2
1 |
1 |

No evidence text available
RPS9 affects PAN2
1 |
1 |

No evidence text available
RPS8 affects PAN2
1 |
1 |

No evidence text available
RPS7 affects PAN2
1 |
1 |

No evidence text available
RPS4X affects PAN2
1 |
1 |

No evidence text available
RPS3A affects PAN2
1 |
1 |

No evidence text available
RPS3 affects PAN2
1 |
1 |

No evidence text available
RPS26 affects PAN2
1 |
1 |

No evidence text available
RPS25 affects PAN2
1 |
1 |

No evidence text available
RPS24 affects PAN2
1 |
1 |

No evidence text available
RPS23 affects PAN2
1 |
1 |

No evidence text available
RPS2 affects PAN2
1 |
1 |

No evidence text available
RPS19 affects PAN2
1 |
1 |

No evidence text available
RPS18 affects PAN2
1 |
1 |

No evidence text available
RPS17 affects PAN2
1 |
1 |

No evidence text available
RPS15A affects PAN2
1 |
1 |

No evidence text available
RPS14 affects PAN2
1 |
1 |

No evidence text available
RPS12 affects PAN2
1 |
1 |

No evidence text available
RPS11 affects PAN2
1 |
1 |

No evidence text available
RPLP0 affects PAN2
1 |
1 |

No evidence text available
RPL7A affects PAN2
1 |
1 |

No evidence text available
RPL7 affects PAN2
1 |
1 |

No evidence text available
RPL6 affects PAN2
1 |
1 |

No evidence text available
RPL5 affects PAN2
1 |
1 |

No evidence text available
RPL4 affects PAN2
1 |
1 |

No evidence text available
RPL38 affects PAN2
1 |
1 |

No evidence text available
RPL37 affects PAN2
1 |
1 |

No evidence text available
RPL36A affects PAN2
1 |
1 |

No evidence text available
RPL36 affects PAN2
1 |
1 |

No evidence text available
RPL35A affects PAN2
1 |
1 |

No evidence text available
RPL35 affects PAN2
1 |
1 |

No evidence text available
RPL34 affects PAN2
1 |
1 |

No evidence text available
RPL32 affects PAN2
1 |
1 |

No evidence text available
RPL31 affects PAN2
1 |
1 |

No evidence text available
RPL30 affects PAN2
1 |
1 |

No evidence text available
RPL3 affects PAN2
1 |
1 |

No evidence text available
RPL29 affects PAN2
1 |
1 |

No evidence text available
RPL28 affects PAN2
1 |
1 |

No evidence text available
RPL27A affects PAN2
1 |
1 |

No evidence text available
RPL27 affects PAN2
1 |
1 |

No evidence text available
RPL26L1 affects PAN2
1 |
1 |

No evidence text available
RPL26 affects PAN2
1 |
1 |

No evidence text available
RPL24 affects PAN2
1 |
1 |

No evidence text available
RPL23A affects PAN2
1 |
1 |

No evidence text available
RPL23 affects PAN2
1 |
1 |

No evidence text available
RPL21 affects PAN2
1 |
1 |

No evidence text available
RPL19 affects PAN2
1 |
1 |

No evidence text available
RPL18A affects PAN2
1 |
1 |

No evidence text available
RPL18 affects PAN2
1 |
1 |

No evidence text available
RPL17 affects PAN2
1 |
1 |

No evidence text available
RPL15 affects PAN2
1 |
1 |

No evidence text available
RPL13A affects PAN2
1 |
1 |

No evidence text available
RPL13 affects PAN2
1 |
1 |

No evidence text available
RPL12 affects PAN2
1 |
1 |

No evidence text available
RPL10A affects PAN2
1 |
1 |

No evidence text available
RPL10 affects PAN2
1 |
1 |

No evidence text available
RPA2 affects PAN2
1 |
1 |

No evidence text available
RPA1 affects PAN2
1 |
1 |

No evidence text available
RNPC3 affects PAN3
| 1
RNPC3 binds PAN2 and PAN3. 1 / 1
| 1

sparser
"We concluded that Pan2-Pan3 does not stably interact with short poly(A) RNPs containing a single Pab1 but requires longer poly(A) RNPs containing two or more Pab1 protomers."
RNPC3 affects PABPC1
| 1
| 1

sparser
"At the oligomerization interface between the second and third Pab1, the RNP interacts with the WD40 domain of Pan2 at a conserved surface of the base of the β-propeller ( xref A and xref A)."
RNF2 affects PAN2
1 |
1 |

No evidence text available
RNF144B affects PAN2
1 |
1 |

No evidence text available
RIOK1 affects PAN2
1 |
1 |

No evidence text available
RCN2 affects PAN2
1 |
1 |

No evidence text available
RBM10 affects PAN2
1 |
1 |

No evidence text available
RBCK1 affects PAN2
1 |
1 |

No evidence text available
RBBP4 affects PAN2
1 |
1 |

No evidence text available
RAI14 affects PAN2
1 |
1 |

No evidence text available
1 |
Plant Extracts increases the amount of PAN2. 1 / 1
1 |

No evidence text available
1 |
Particulate Matter increases the amount of PAN2. 1 / 1
1 |

No evidence text available
Pan3S affects PAN2
| 1
Pan3S activates PAN2. 1 / 1
| 1

reach
"Pan2 deadenylase activity is enhanced by Pan3S but suppressed by Pan3L."
Pan3L affects PAN2
| 1
Pan3L inhibits PAN2. 1 / 1
| 1

reach
"Pan2 deadenylase activity is enhanced by Pan3S but suppressed by Pan3L."
Pab1p affects PAN2
| 1
Pab1p activates PAN2. 1 / 1
| 1

reach
"While Pab1p stimulates PAN2, the association of poly (A) binding proteins with human or Xenopus mRNAs appears to protect the transcript from deadenylation (Bernstein et al. 1989; Brown et al. 1996; Wo[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
PUF3C affects PAN2
| 1
PAN2 binds PUF3C. 1 / 1
| 1

reach
"We also assessed whether PUF3C could interact with PAN2."
PSMC5 affects PAN2
1 |
1 |

No evidence text available
PRNP affects PAN2
1 |
1 |

No evidence text available
PRMT5 affects PAN2
1 |
1 |

No evidence text available
PPP1R12B affects PAN2
1 |
1 |

No evidence text available
PPP1R12A affects PAN2
1 |
1 |

No evidence text available
PPM1B affects PAN2
1 |
1 |

No evidence text available
PPARA affects PAN2
1 |
PPARA decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
POU3F1 affects PAN2
1 |
POU3F1 decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
POM121C affects PAN2
1 |
1 |

No evidence text available
POM121 affects PAN2
1 |
1 |

No evidence text available
PKM affects PAN2
1 |
1 |

No evidence text available
PKC affects PAN3
| 1
PKC binds PAN2 and PAN3. 1 / 1
| 1

sparser
"When we tested the interaction of the ct Pan2Pan3 PKC complex with polyA RNA, the binding was comparable to ct Pan3 PKC alone (Fig  xref B)."
PITX2 affects PAN2
1 |
PITX2 decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
PFDN2 affects PAN2
1 |
1 |

No evidence text available
PCM1 affects PAN2
1 |
1 |

No evidence text available
PCI 5002 affects PAN2
1 |
PCI 5002 increases the amount of PAN2. 1 / 1
1 |

No evidence text available
PCGF5 affects PAN2
1 |
1 |

No evidence text available
PCGF3 affects PAN2
1 |
1 |

No evidence text available
PCBP1 affects PAN2
1 |
1 |

No evidence text available
PAWR affects PAN2
1 |
1 |

No evidence text available
PARP1 affects PAN2
1 |
1 |

No evidence text available
PAN3 affects nuclease
| 1
CNOT7 binds PAN2, PAN3, nuclease, and ccr4. 1 / 1
| 1

sparser
"Collectively, our data support that Pan2Pan3 and Ccr4Caf1 poly(A) nuclease complexes can associate with each other to form a supercomplex in vivo."
PAN3 affects exonuclease
| 1
PAN2 binds PAN3, exonuclease, and ccr4. 1 / 1
| 1

sparser
"Of note, Ago2 is also known to regulate mRNA silencing through interacting with exonuclease complexes, the Ccr4-Not and Pan2-Pan3 complexes xref , in a miRNA-independent manner, which likely contributes to suppression of protein translation and energy metabolism in the liver."
PAN3 affects RNPC3
| 1
RNPC3 binds PAN2 and PAN3. 1 / 1
| 1

sparser
"We concluded that Pan2-Pan3 does not stably interact with short poly(A) RNPs containing a single Pab1 but requires longer poly(A) RNPs containing two or more Pab1 protomers."
PAN3 affects PKC
| 1
PKC binds PAN2 and PAN3. 1 / 1
| 1

sparser
"When we tested the interaction of the ct Pan2Pan3 PKC complex with polyA RNA, the binding was comparable to ct Pan3 PKC alone (Fig  xref B)."
PAN3 affects PABPC1
1 |
PAN2 binds PAN3 and PABPC1. 1 / 1
1 |

No evidence text available
PAN3 affects MTA2
| 1
PAN2 binds PAN3 and MTA2. 1 / 1
| 1

sparser
"In summary, we found that it was difficult to disrupt the Pan2Pan3 interaction by deletion of substantial regions of ct Pan2 PID and show that a core region (residues 343–406) makes a major contribution to the association of ct Pan2 and ct Pan3."
PAN3 affects MARF1
| 1
PAN2 binds MARF1 and PAN3. 1 / 1
| 1

sparser
"Next, we tested whether MARF1 binds Pan2 and Pan3, components of the Pan2Pan3 deadenylase complex, and found that they did not co-immunoprecipitate with MARF1 (Supplementary Fig.  xref , D)."
PAN2 affects transport
| 1
| 1

reach
"An alternative view is that since a pan2 defect can block mRNA transport out of the nucleus in 50% of the cells observed, the combination of a ccr4 deletion and this transport defect is the cause for the lack of COX17 mRNA deadenylation in the ccr4 pan2 strain background."

reach
"This study demonstrates that USP52 inhibits cancer cell proliferation through downregulation of cyclin D1 as well as AKT/mTOR signaling pathway inhibition."
PAN2 affects response to hypoxia
| 1
PAN2 activates response to hypoxia. 1 / 1
| 1

reach
"Interestingly, it has been reported previously that USP52 and KIAA0710 mRNA itself was induced 3.1-fold in response to hypoxia determined by microarray analysis of human renal cancer 786-O cells [XREF_BIBR]."

reach
"USP52 knockdown specifically impaired the hypoxia response, as it caused no such impairment to the NF-kappaB (nuclear factor kappaB) response after TNFalpha (tumour necrosis factor alpha) stimulation of the HeLa C57A cell line [XREF_BIBR]."
PAN2 affects pan
| 1
| 1

reach
"HuR may modulate translation of several ARE-mRNAs by a process that is independent of ARE or 3 ' UTR, which involves binding of HuR to IRES in the 5 ' UTR.19, 20, 21 AREs mediate their effects on mRNA decay by first enhancing deadenylation (polyA shortening), a first step in mRNA decay facilitated by CCR4 and NOT and PAN2 and PAN complexes."
PAN2 affects nuclease
| 1
CNOT7 binds PAN2, PAN3, nuclease, and ccr4. 1 / 1
| 1

sparser
"Collectively, our data support that Pan2Pan3 and Ccr4Caf1 poly(A) nuclease complexes can associate with each other to form a supercomplex in vivo."
| 1

reach
"The paN2 allows Escherichia coli to liberate the sulfur of DBT and DBTs and pBADD produces a flavin reductase."
PAN2 bound to RBBP8 activates homologous recombination. 1 / 1
| 1

reach
"USP52 directly interacts with and deubiquitylates CtIP to promote DNA end resection and HR [118]."
PAN2 affects hCG_1757335
1 |
PAN2 binds hCG_1757335. 1 / 1
1 |

No evidence text available
PAN2 affects glucose
| 1
PAN2 activates glucose. 1 / 1
| 1

reach
"In a glucose-limited fed-batch fermentation, the PAN2* strain produced 19.5 g/L amino acids in 89 h, which was 16% higher than that produced by the parental D452-2 strain."
PAN2 affects cell cycle
| 1
| 1

reach
"USP52 promoted ASF1A stabilization facilitates chromatin assembly and favors cell cycle progression."
PAN2 affects ccr4Delta khd1Delta mutant [
| 1
PAN2 inhibits ccr4Delta khd1Delta mutant [. 1 / 1
| 1

reach
"We have previously reported that PAN2 overexpression from the multi-copy plasmid suppresses the growth defect of the ccr4Delta khd1Delta mutant [XREF_BIBR]."
PAN2 affects ZNF234
1 |
1 |

No evidence text available
PAN2 affects YWHAE
1 |
1 |

No evidence text available
PAN2 affects YUH1
| 1
PAN2 binds YUH1 and EXO. 1 / 1
| 1

sparser
"The lack of base-specific interactions between Pan2 UCH-Exo and adenines was surprising given that Pan2 displayed strong specificity against guanosines ( xref )."
PAN2 affects YES1
1 |
1 |

No evidence text available
PAN2 affects YBX3
1 |
1 |

No evidence text available
PAN2 affects YBX1
1 |
1 |

No evidence text available
PAN2 affects XRN2
1 |
1 |

No evidence text available
PAN2 affects VIM
1 |
1 |

No evidence text available
PAN2 affects USP52in
| 1
PAN2 activates USP52in. 1 / 1
| 1

reach
"To investigate further the role of USP52in the HIF1A mediated hypoxic response, U2OS cells were treated with individual USP52 siRNA duplexes 1 and 3 and exposed to hypoxia."
PAN2 affects UBTD1
1 |
1 |

No evidence text available
PAN2 affects UACA
1 |
1 |

No evidence text available
PAN2 affects TXN
1 |
1 |

No evidence text available
PAN2 affects TUFM
1 |
1 |

No evidence text available
PAN2 affects TUBB4B
1 |
1 |

No evidence text available
PAN2 affects TUBB
1 |
1 |

No evidence text available
PAN2 affects TUBA1B
1 |
1 |

No evidence text available
PAN2 affects TUBA1A
1 |
1 |

No evidence text available
PAN2 affects TRIM35
1 |
1 |

No evidence text available
PAN2 affects TRIM21
1 |
1 |

No evidence text available
PAN2 affects TPM4
1 |
1 |

No evidence text available
PAN2 affects TPM3P4
1 |
1 |

No evidence text available
PAN2 affects TPM3
1 |
1 |

No evidence text available
PAN2 affects TPM1
1 |
1 |

No evidence text available
PAN2 affects TP53
1 |
1 |

No evidence text available
PAN2 affects TOB2
1 |
1 |

No evidence text available
PAN2 affects TNRC6A
1 |
1 |

No evidence text available
PAN2 affects TMOD3
1 |
1 |

No evidence text available
PAN2 affects TMOD2
1 |
1 |

No evidence text available
PAN2 affects TMOD1
1 |
1 |

No evidence text available
PAN2 affects TJP1
1 |
1 |

No evidence text available
PAN2 affects THRAP3
1 |
1 |

No evidence text available
PAN2 affects TFAM
1 |
1 |

No evidence text available
PAN2 affects TET2
1 |
1 |

No evidence text available
PAN2 affects TCP1
1 |
1 |

No evidence text available
PAN2 affects TCOF1
1 |
1 |

No evidence text available
PAN2 affects SVIL
1 |
1 |

No evidence text available
PAN2 affects STMN1
1 |
1 |

No evidence text available
PAN2 affects STK38L
1 |
1 |

No evidence text available
PAN2 affects STING1
1 |
1 |

No evidence text available
PAN2 affects SSBP1
1 |
1 |

No evidence text available
PAN2 affects SRSF8
1 |
1 |

No evidence text available
PAN2 affects SRSF7
1 |
1 |

No evidence text available
PAN2 affects SRSF6
1 |
1 |

No evidence text available
PAN2 affects SRSF3
1 |
1 |

No evidence text available
PAN2 affects SRRM2
1 |
1 |

No evidence text available
PAN2 affects SRP14
1 |
1 |

No evidence text available
PAN2 affects SQSTM1
1 |
1 |

No evidence text available
PAN2 affects SPTBN1
1 |
1 |

No evidence text available
PAN2 affects SPTAN1
1 |
1 |

No evidence text available
PAN2 affects SPECC1L
1 |
1 |

No evidence text available
PAN2 affects SOWAHA
1 |
1 |

No evidence text available
PAN2 affects SNRPD2
1 |
1 |

No evidence text available
PAN2 affects SNRPD1
1 |
1 |

No evidence text available
PAN2 affects SNRPB
1 |
1 |

No evidence text available
PAN2 affects SNRNP70
1 |
1 |

No evidence text available
PAN2 affects SMPDL3B
1 |
1 |

No evidence text available
PAN2 affects SMN1
1 |
1 |

No evidence text available
PAN2 affects SLC2A1
| 1
PAN2 inhibits SLC2A1. 1 / 1
| 1

reach
"Examination of GLUT1 and LDHA levels by immunoblot analysis of hypoxic U2OS cells revealed that USP52 depletion impairs the accumulation of GLUT1 and LDHA in response to hypoxia (XREF_FIG A), thus demonstrating that USP52 is required to potentiate the HIF1A mediated hypoxic response."
PAN2 affects SH3BGRL2
1 |
1 |

No evidence text available
PAN2 affects SFPQ
1 |
1 |

No evidence text available
PAN2 affects SF3B6
1 |
1 |

No evidence text available
PAN2 affects SF3A2
1 |
1 |

No evidence text available
PAN2 affects SERBP1
1 |
1 |

No evidence text available
PAN2 affects SEC16A
1 |
1 |

No evidence text available
PAN2 affects SART1
1 |
1 |

No evidence text available
PAN2 affects RUVBL2
1 |
1 |

No evidence text available
PAN2 affects RRP1
1 |
1 |

No evidence text available
PAN2 affects RRAS2
1 |
1 |

No evidence text available
PAN2 affects RPS9
1 |
1 |

No evidence text available
PAN2 affects RPS8
1 |
1 |

No evidence text available
PAN2 affects RPS7
1 |
1 |

No evidence text available
PAN2 affects RPS4X
1 |
1 |

No evidence text available
PAN2 affects RPS3A
1 |
1 |

No evidence text available
PAN2 affects RPS3
1 |
1 |

No evidence text available
PAN2 affects RPS26
1 |
1 |

No evidence text available
PAN2 affects RPS25
1 |
1 |

No evidence text available
PAN2 affects RPS24
1 |
1 |

No evidence text available
PAN2 affects RPS23
1 |
1 |

No evidence text available
PAN2 affects RPS2
1 |
1 |

No evidence text available
PAN2 affects RPS19
1 |
1 |

No evidence text available
PAN2 affects RPS18
1 |
1 |

No evidence text available
PAN2 affects RPS17
1 |
1 |

No evidence text available
PAN2 affects RPS15A
1 |
1 |

No evidence text available
PAN2 affects RPS14
1 |
1 |

No evidence text available
PAN2 affects RPS12
1 |
1 |

No evidence text available
PAN2 affects RPS11
1 |
1 |

No evidence text available
PAN2 affects RPLP0
1 |
1 |

No evidence text available
PAN2 affects RPL7A
1 |
1 |

No evidence text available
PAN2 affects RPL7
1 |
1 |

No evidence text available
PAN2 affects RPL6
1 |
1 |

No evidence text available
PAN2 affects RPL5
1 |
1 |

No evidence text available
PAN2 affects RPL4
1 |
1 |

No evidence text available
PAN2 affects RPL38
1 |
1 |

No evidence text available
PAN2 affects RPL37
1 |
1 |

No evidence text available
PAN2 affects RPL36A
1 |
1 |

No evidence text available
PAN2 affects RPL36
1 |
1 |

No evidence text available
PAN2 affects RPL35A
1 |
1 |

No evidence text available
PAN2 affects RPL35
1 |
1 |

No evidence text available
PAN2 affects RPL34
1 |
1 |

No evidence text available
PAN2 affects RPL32
1 |
1 |

No evidence text available
PAN2 affects RPL31
1 |
1 |

No evidence text available
PAN2 affects RPL30
1 |
1 |

No evidence text available
PAN2 affects RPL3
1 |
1 |

No evidence text available
PAN2 affects RPL29
1 |
1 |

No evidence text available
PAN2 affects RPL28
1 |
1 |

No evidence text available
PAN2 affects RPL27A
1 |
1 |

No evidence text available
PAN2 affects RPL27
1 |
1 |

No evidence text available
PAN2 affects RPL26L1
1 |
1 |

No evidence text available
PAN2 affects RPL26
1 |
1 |

No evidence text available
PAN2 affects RPL24
1 |
1 |

No evidence text available
PAN2 affects RPL23A
1 |
1 |

No evidence text available
PAN2 affects RPL23
1 |
1 |

No evidence text available
PAN2 affects RPL21
1 |
1 |

No evidence text available
PAN2 affects RPL19
1 |
1 |

No evidence text available
PAN2 affects RPL18A
1 |
1 |

No evidence text available
PAN2 affects RPL18
1 |
1 |

No evidence text available
PAN2 affects RPL17
1 |
1 |

No evidence text available
PAN2 affects RPL15
1 |
1 |

No evidence text available
PAN2 affects RPL13A
1 |
1 |

No evidence text available
PAN2 affects RPL13
1 |
1 |

No evidence text available
PAN2 affects RPL12
1 |
1 |

No evidence text available
PAN2 affects RPL10A
1 |
1 |

No evidence text available
PAN2 affects RPL10
1 |
1 |

No evidence text available
PAN2 affects RPA2
1 |
1 |

No evidence text available
PAN2 affects RPA1
1 |
1 |

No evidence text available
PAN2 affects RNF2
1 |
1 |

No evidence text available
PAN2 affects RNF144B
1 |
1 |

No evidence text available
PAN2 affects RIOK1
1 |
1 |

No evidence text available
PAN2 affects RCN2
1 |
1 |

No evidence text available
PAN2 affects RBM10
1 |
1 |

No evidence text available
PAN2 affects RBCK1
1 |
1 |

No evidence text available
PAN2 affects RBBP4
1 |
1 |

No evidence text available
PAN2 affects RAI14
1 |
1 |

No evidence text available
PAN2 affects Pbp1
| 1
| 1

reach
"29 Furthermore, the poly (A)-nuclease subunit Pan2 binds to Pbp1, 27 and the poly (A)-polymerase binding proteins Fir1 and Ufd1 interact with Pbp1 and have also been implicated in processing the 3 '-e[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
PAN2 affects PUF3C
| 1
PAN2 binds PUF3C. 1 / 1
| 1

reach
"We also assessed whether PUF3C could interact with PAN2."
PAN2 affects PTEN
| 1
PAN2 inhibits PTEN. 1 / 1
| 1

reach
"USP52 inhibits cell proliferation by stabilizing PTEN protein in non-small cell lung cancer."
PAN2 affects PSMC5
1 |
1 |

No evidence text available
PAN2 affects PRNP
1 |
1 |

No evidence text available
PAN2 affects PRMT5
1 |
1 |

No evidence text available
PAN2 affects PPP1R12B
1 |
1 |

No evidence text available
PAN2 affects PPP1R12A
1 |
1 |

No evidence text available
PAN2 affects PPM1B
1 |
1 |

No evidence text available
PAN2 affects POM121C
1 |
1 |

No evidence text available
PAN2 affects POM121
1 |
1 |

No evidence text available
PAN2 affects PKM
1 |
1 |

No evidence text available
PAN2 affects PKC
| 1
PKC binds PAN2 and PAN3. 1 / 1
| 1

sparser
"When we tested the interaction of the ct Pan2Pan3 PKC complex with polyA RNA, the binding was comparable to ct Pan3 PKC alone (Fig  xref B)."
PAN2 affects PFDN2
1 |
1 |

No evidence text available
PAN2 affects PCM1
1 |
1 |

No evidence text available
PAN2 affects PCGF5
1 |
1 |

No evidence text available
PAN2 affects PCGF3
1 |
1 |

No evidence text available
PAN2 affects PCBP1
1 |
1 |

No evidence text available
PAN2 affects PAWR
1 |
1 |

No evidence text available
PAN2 affects PARP1
1 |
1 |

No evidence text available
PAN2 affects PAN3, ccr4, and exonuclease
| 1
PAN2 binds PAN3, exonuclease, and ccr4. 1 / 1
| 1

sparser
"Of note, Ago2 is also known to regulate mRNA silencing through interacting with exonuclease complexes, the Ccr4-Not and Pan2-Pan3 complexes xref , in a miRNA-independent manner, which likely contributes to suppression of protein translation and energy metabolism in the liver."
PAN2 affects PAN3, and ccr4
| 1
PAN2 binds PAN3 and ccr4. 1 / 1
| 1

sparser
"Interestingly, interactions between Pan2-Pan3 and Ccr4-Not can be detected suggesting that both deadenylase complexes can reside in a higher order complex that may include other components ( xref )."
PAN2 affects PAN3, and RNPC3
| 1
RNPC3 binds PAN2 and PAN3. 1 / 1
| 1

sparser
"We concluded that Pan2-Pan3 does not stably interact with short poly(A) RNPs containing a single Pab1 but requires longer poly(A) RNPs containing two or more Pab1 protomers."
PAN2 affects PAN3, and PKC
| 1
PKC binds PAN2 and PAN3. 1 / 1
| 1

sparser
"When we tested the interaction of the ct Pan2Pan3 PKC complex with polyA RNA, the binding was comparable to ct Pan3 PKC alone (Fig  xref B)."
PAN2 affects PACSIN3
1 |
1 |

No evidence text available
PAN2 affects PABPC4
1 |
1 |

No evidence text available
PAN2 affects PABP
| 1
| 1

reach
"The modest amount of endogenous PABP in the precipitate (XREF_FIG) suggests an indirect association between HA-Pan2 and PABP, presumably mediated via Pan3-V5, as HA-Pan2 alone did not pull down PABP (XREF_FIG)."
PAN2 affects OFD1
1 |
1 |

No evidence text available
PAN2 affects Nanos
| 1
PAN2 binds Nanos. 1 / 1
| 1

reach
"Nanos interacted with NOT1, NOT2, NOT3, PAN2, and PAN3 (Figs XREF_FIG A-D and XREF_FIG G-M)."
PAN2 affects NUP93
1 |
1 |

No evidence text available
PAN2 affects NUP50
1 |
1 |

No evidence text available
PAN2 affects NSMCE2
1 |
1 |

No evidence text available
PAN2 affects NPM1
1 |
1 |

No evidence text available
PAN2 affects NOLC1
1 |
1 |

No evidence text available
PAN2 affects NISCH
1 |
1 |

No evidence text available
PAN2 affects NEXN
1 |
1 |

No evidence text available
PAN2 affects NCL
1 |
1 |

No evidence text available
PAN2 affects MYO6
1 |
1 |

No evidence text available
PAN2 affects MYO5C
1 |
1 |

No evidence text available
PAN2 affects MYO5B
1 |
1 |

No evidence text available
PAN2 affects MYO5A
1 |
1 |

No evidence text available
PAN2 affects MYO1E
1 |
1 |

No evidence text available
PAN2 affects MYO1D
1 |
1 |

No evidence text available
PAN2 affects MYO1C
1 |
1 |

No evidence text available
PAN2 affects MYO1B
1 |
1 |

No evidence text available
PAN2 affects MYO18A
1 |
1 |

No evidence text available
PAN2 affects MYO10
1 |
1 |

No evidence text available
PAN2 affects MYL6B
1 |
1 |

No evidence text available
PAN2 affects MYL12B
1 |
1 |

No evidence text available
PAN2 affects MYH9
1 |
1 |

No evidence text available
PAN2 affects MYH14
1 |
1 |

No evidence text available
PAN2 affects MYH10
1 |
1 |

No evidence text available
PAN2 affects MYCBP
1 |
1 |

No evidence text available
PAN2 affects MTA2
| 1
PAN2 binds PAN3 and MTA2. 1 / 1
| 1

sparser
"In summary, we found that it was difficult to disrupt the Pan2Pan3 interaction by deletion of substantial regions of ct Pan2 PID and show that a core region (residues 343–406) makes a major contribution to the association of ct Pan2 and ct Pan3."
PAN2 affects MT1M
1 |
1 |

No evidence text available
PAN2 affects MEX3C
1 |
1 |

No evidence text available
PAN2 affects MARCKSL1
1 |
1 |

No evidence text available
PAN2 affects MAP1B
1 |
1 |

No evidence text available
PAN2 affects LZTS2
1 |
1 |

No evidence text available
PAN2 affects LYN
1 |
1 |

No evidence text available
PAN2 affects LSM1
1 |
1 |

No evidence text available
PAN2 affects LMNB2
1 |
1 |

No evidence text available
PAN2 affects LIMA1
1 |
1 |

No evidence text available
PAN2 affects LGALS8
1 |
1 |

No evidence text available
PAN2 affects LDHA
| 1
PAN2 inhibits LDHA. 1 / 1
| 1

reach
"Examination of GLUT1 and LDHA levels by immunoblot analysis of hypoxic U2OS cells revealed that USP52 depletion impairs the accumulation of GLUT1 and LDHA in response to hypoxia (XREF_FIG A), thus demonstrating that USP52 is required to potentiate the HIF1A mediated hypoxic response."
PAN2 affects KRT9
1 |
1 |

No evidence text available
PAN2 affects KRT6A
1 |
1 |

No evidence text available
PAN2 affects KRT2
1 |
1 |

No evidence text available
PAN2 affects KRT19
1 |
1 |

No evidence text available
PAN2 affects KRT18
1 |
1 |

No evidence text available
PAN2 affects KRT10
1 |
1 |

No evidence text available
PAN2 affects KIF11
1 |
1 |

No evidence text available
PAN2 affects KIAA1671
1 |
1 |

No evidence text available
PAN2 affects KCTD5
1 |
1 |

No evidence text available
PAN2 affects JUP
1 |
1 |

No evidence text available
PAN2 affects IVNS1ABP
1 |
1 |

No evidence text available
PAN2 affects IRS4
1 |
1 |

No evidence text available
PAN2 affects INA
1 |
1 |

No evidence text available
PAN2 affects IGKV2-40
1 |
1 |

No evidence text available
PAN2 affects IGHG2
1 |
1 |

No evidence text available
PAN2 affects IGF2BP1
1 |
1 |

No evidence text available
PAN2 affects HSPD1
1 |
1 |

No evidence text available
PAN2 affects HSPA9
1 |
1 |

No evidence text available
PAN2 affects HSPA8
1 |
1 |

No evidence text available
PAN2 affects HSPA5
1 |
1 |

No evidence text available
PAN2 affects HSPA1A
1 |
1 |

No evidence text available
PAN2 affects HSP90AB1
1 |
1 |

No evidence text available
PAN2 affects HSP90AA1
1 |
1 |

No evidence text available
PAN2 affects HNRNPU
1 |
1 |

No evidence text available
PAN2 affects HNRNPM
1 |
1 |

No evidence text available
PAN2 affects HNRNPH1
1 |
1 |

No evidence text available
PAN2 affects HNRNPD
1 |
1 |

No evidence text available
PAN2 affects HNRNPA3
1 |
1 |

No evidence text available
PAN2 affects HNRNPA2B1
1 |

No evidence text available
PAN2 affects HNRNPA1
1 |
1 |

No evidence text available
PAN2 affects HMGA1
1 |
1 |

No evidence text available
PAN2 affects HIF-1alpha mRNA
| 1
PAN2 activates HIF-1alpha mRNA. 1 / 1
| 1

eidos
"Thereby , depletion of USP52 reduced the HIF-1alpha mRNA levels via a 3 ' - untranslated region-dependent but poly ( A ) - tail-length-independent interference mechanism , with the effect that HIF-1alpha-regulated hypoxic targets were expressed at a lower level [ 124 ] ."
PAN2 affects HELZ
1 |
1 |

No evidence text available
PAN2 affects HBB
1 |
1 |

No evidence text available
PAN2 affects HBA1
1 |
1 |

No evidence text available
PAN2 affects HADHB
1 |
1 |

No evidence text available
PAN2 affects HADHA
1 |
1 |

No evidence text available
PAN2 affects H4C1
1 |
1 |

No evidence text available
PAN2 affects H2BS1
1 |
1 |

No evidence text available
PAN2 affects H2AZ1
1 |
1 |

No evidence text available
PAN2 affects H1-4
1 |
1 |

No evidence text available
PAN2 affects GST50DeltaC
| 1
PAN2 binds GST50DeltaC. 1 / 1
| 1

reach
"In contrast, preincubation of GST50DeltaC with the irrelevant oligomer, GBL, failed to inhibit the formation of the GST50DeltaC and PAN2 complexes."
PAN2 affects GNG12
1 |
1 |

No evidence text available
PAN2 affects GNB4
1 |
1 |

No evidence text available
PAN2 affects GNB2
1 |
1 |

No evidence text available
PAN2 affects GNB1
1 |
1 |

No evidence text available
PAN2 affects GNAI3
1 |
1 |

No evidence text available
PAN2 affects GNAI2
1 |
1 |

No evidence text available
PAN2 affects GLG1
1 |
1 |

No evidence text available
PAN2 affects FUS
| 1
| 1

reach
"Moreover, CPSF6 and PAN2 interacted with FUS both in the presence and absence of RNase A, indicating that they form an RNA independent protein complex (XREF_FIG)."
PAN2 affects FLII
1 |
1 |

No evidence text available
PAN2 affects FBL
1 |
1 |

No evidence text available
PAN2 affects FARSA
1 |
1 |

No evidence text available
PAN2 affects EXO
| 1
PAN2 binds YUH1 and EXO. 1 / 1
| 1

sparser
"The lack of base-specific interactions between Pan2 UCH-Exo and adenines was surprising given that Pan2 displayed strong specificity against guanosines ( xref )."
PAN2 affects ERF
1 |
1 |

No evidence text available
PAN2 affects EMD
1 |
1 |

No evidence text available
PAN2 affects ELOC
1 |
1 |

No evidence text available
PAN2 affects ELOB
1 |
1 |

No evidence text available
PAN2 affects ELAVL1
1 |
1 |

No evidence text available
PAN2 affects EIF4ENIF1
1 |

No evidence text available
PAN2 affects EIF4B
1 |
1 |

No evidence text available
PAN2 affects EIF3I
1 |
1 |

No evidence text available
PAN2 affects EIF3H
1 |
1 |

No evidence text available
PAN2 affects EIF3G
1 |
1 |

No evidence text available
PAN2 affects EIF3B
1 |
1 |

No evidence text available
PAN2 affects EFTUD2
1 |
1 |

No evidence text available
PAN2 affects EFHD2
1 |
1 |

No evidence text available
PAN2 affects EFHD1
1 |
1 |

No evidence text available
PAN2 affects EEF1G
1 |
1 |

No evidence text available
PAN2 affects EBF3
1 |
1 |

No evidence text available
PAN2 affects DYNLL1
1 |
1 |

No evidence text available
PAN2 affects DSG2
1 |
1 |

No evidence text available
PAN2 affects DOCK7
1 |
1 |

No evidence text available
PAN2 affects DNAJA2
1 |
1 |

No evidence text available
PAN2 affects DNAJA1
1 |
1 |

No evidence text available
PAN2 affects DNA resection
| 1
PAN2 inhibits DNA resection. 1 / 1
| 1

eidos
"Here , we identify that USP52 directly interacts with and deubiquitinates CtIP , thereby promoting DNA end resection and HR ."
PAN2 affects DHX9
1 |
1 |

No evidence text available
PAN2 affects DBT
| 1
PAN2 activates DBT. 1 / 1
| 1

reach
"The paN2 allows Escherichia coli to liberate the sulfur of DBT and DBTs and pBADD produces a flavin reductase."
PAN2 affects DBN1
1 |
1 |

No evidence text available
PAN2 affects CTTN
1 |
1 |

No evidence text available
PAN2 affects CTNNA2
1 |
1 |

No evidence text available
PAN2 affects CREBBP
1 |
1 |

No evidence text available
PAN2 affects CORO1C
1 |
1 |

No evidence text available
PAN2 affects COL1A2
1 |
1 |

No evidence text available
PAN2 affects CNN3
1 |
1 |

No evidence text available
PAN2 affects CNN2
1 |
1 |

No evidence text available
PAN2 affects CNBP
1 |
1 |

No evidence text available
PAN2 affects CMBL
1 |
1 |

No evidence text available
PAN2 affects CLTC
1 |
1 |

No evidence text available
PAN2 affects CLTB
1 |
1 |

No evidence text available
PAN2 affects CLTA
1 |
1 |

No evidence text available
PAN2 affects CLNS1A
1 |
1 |

No evidence text available
PAN2 affects CLINT1
1 |
1 |

No evidence text available
PAN2 affects CFL2
1 |
1 |

No evidence text available
PAN2 affects CEP170
1 |
1 |

No evidence text available
PAN2 affects CD59
1 |
1 |

No evidence text available
PAN2 affects CCT8
1 |
1 |

No evidence text available
PAN2 affects CCT6A
1 |
1 |

No evidence text available
PAN2 affects CCT5
1 |
1 |

No evidence text available
PAN2 affects CCT4
1 |
1 |

No evidence text available
PAN2 affects CCT3
1 |
1 |

No evidence text available
PAN2 affects CCT2
1 |
1 |

No evidence text available
PAN2 affects CBWD2
1 |
1 |

No evidence text available
PAN2 affects CAPZB
1 |
1 |

No evidence text available
PAN2 affects CAPZA2
1 |
1 |

No evidence text available
PAN2 affects CAPZA1
1 |
1 |

No evidence text available
PAN2 affects CALM1
1 |
1 |

No evidence text available
PAN2 affects CALD1
1 |
1 |

No evidence text available
PAN2 affects C15orf39
1 |
1 |

No evidence text available
PAN2 affects BOLA2
1 |
1 |

No evidence text available
PAN2 affects BLNK
| 1
BLNK binds PAN2, exonuclease, and ccr4. 1 / 1
| 1

sparser
"Caf1 is a DEDD-family exonuclease in the Ccr4–Not complex with structural homology with the Pan2 exonuclease domain."
PAN2 affects BASP1
1 |
1 |

No evidence text available
PAN2 affects BAG2
1 |
1 |

No evidence text available
PAN2 affects ATP6V1B2
1 |
1 |

No evidence text available
PAN2 affects ATP5F1A
1 |
1 |

No evidence text available
PAN2 affects ASF1B
1 |
1 |

No evidence text available
PAN2 affects ARPC1B
1 |
1 |

No evidence text available
PAN2 affects ARID3A
1 |
1 |

No evidence text available
PAN2 affects ARCN1
1 |
1 |

No evidence text available
PAN2 affects AP2A2
1 |
1 |

No evidence text available
PAN2 affects ALYREF
1 |
1 |

No evidence text available
PAN2 affects AIMP1
1 |
1 |

No evidence text available
PAN2 affects AIFM1
1 |
1 |

No evidence text available
PAN2 affects ACTR3B
1 |
1 |

No evidence text available
PAN2 affects ACTC1
1 |
1 |

No evidence text available
PAN2 affects ACTB
1 |
1 |

No evidence text available
PACSIN3 affects PAN2
1 |
1 |

No evidence text available
PABPC4 affects PAN2
1 |
1 |

No evidence text available
PABPC1 affects RNPC3
| 1
| 1

sparser
"At the oligomerization interface between the second and third Pab1, the RNP interacts with the WD40 domain of Pan2 at a conserved surface of the base of the β-propeller ( xref A and xref A)."
PABPC1 affects PAN3
1 |
PAN2 binds PAN3 and PABPC1. 1 / 1
1 |

No evidence text available
PABPC1 affects PAN2, and RNPC3
| 1
| 1

sparser
"At the oligomerization interface between the second and third Pab1, the RNP interacts with the WD40 domain of Pan2 at a conserved surface of the base of the β-propeller ( xref A and xref A)."
PABPC1 affects PAN2, and PAN3
1 |
PAN2 binds PAN3 and PABPC1. 1 / 1
1 |

No evidence text available
OFD1 affects PAN2
1 |
1 |

No evidence text available
Nanos affects PAN2
| 1
PAN2 binds Nanos. 1 / 1
| 1

reach
"Nanos interacted with NOT1, NOT2, NOT3, PAN2, and PAN3 (Figs XREF_FIG A-D and XREF_FIG G-M)."
NUP93 affects PAN2
1 |
1 |

No evidence text available
NUP50 affects PAN2
1 |
1 |

No evidence text available
NSMCE2 affects PAN2
1 |
1 |

No evidence text available
NR3C1 affects PAN2
1 |
NR3C1 decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
NR2F2 affects PAN2
1 |
NR2F2 decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
NPM1 affects PAN2
1 |
1 |

No evidence text available
NOLC1 affects PAN2
1 |
1 |

No evidence text available
NISCH affects PAN2
1 |
1 |

No evidence text available
NEXN affects PAN2
1 |
1 |

No evidence text available
NCL affects PAN2
1 |
1 |

No evidence text available
| 1

reach
"Although the conserved cysteine residue in the triad of classical DUBs is replaced by alanine (A526) in the UCH domain of USP52, we demonstrated that addition of the alkylating reagent N-ethylmaleimide (NEM), a known inhibitor of cysteine proteases XREF_BIBR, XREF_BIBR, almost completely abolished the catalytic activity of USP52 against K48- or K63 linked tetra-ubiquitins."

reach
"In order to exclude USP52 knockdown promoting HIF1A depletion through alternative degradation pathways, U2OS cells depleted of USP52 were treated with the proteasome inhibitor MG132."
MYO6 affects PAN2
1 |
1 |

No evidence text available
MYO5C affects PAN2
1 |
1 |

No evidence text available
MYO5B affects PAN2
1 |
1 |

No evidence text available
MYO5A affects PAN2
1 |
1 |

No evidence text available
MYO1E affects PAN2
1 |
1 |

No evidence text available
MYO1D affects PAN2
1 |
1 |

No evidence text available
MYO1C affects PAN2
1 |
1 |

No evidence text available
MYO1B affects PAN2
1 |
1 |

No evidence text available
MYO18A affects PAN2
1 |
1 |

No evidence text available
MYO10 affects PAN2
1 |
1 |

No evidence text available
MYL6B affects PAN2
1 |
1 |

No evidence text available
MYL12B affects PAN2
1 |
1 |

No evidence text available
MYH9 affects PAN2
1 |
1 |

No evidence text available
MYH14 affects PAN2
1 |
1 |

No evidence text available
MYH10 affects PAN2
1 |
1 |

No evidence text available
MYCBP affects PAN2
1 |
1 |

No evidence text available
MYB affects PAN2
1 |
MYB decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
MTA2 affects PAN3
| 1
PAN2 binds PAN3 and MTA2. 1 / 1
| 1

sparser
"In summary, we found that it was difficult to disrupt the Pan2Pan3 interaction by deletion of substantial regions of ct Pan2 PID and show that a core region (residues 343–406) makes a major contribution to the association of ct Pan2 and ct Pan3."
MT1M affects PAN2
1 |
1 |

No evidence text available
MEX3C affects PAN2
1 |
1 |

No evidence text available
MARF1 affects PAN3
| 1
PAN2 binds MARF1 and PAN3. 1 / 1
| 1

sparser
"Next, we tested whether MARF1 binds Pan2 and Pan3, components of the Pan2Pan3 deadenylase complex, and found that they did not co-immunoprecipitate with MARF1 (Supplementary Fig.  xref , D)."
MARCKSL1 affects PAN2
1 |
1 |

No evidence text available
MAP1B affects PAN2
1 |
1 |

No evidence text available
LZTS2 affects PAN2
1 |
1 |

No evidence text available
LYN affects PAN2
1 |
1 |

No evidence text available
LSM1 affects PAN2
1 |
1 |

No evidence text available
LMNB2 affects PAN2
1 |
1 |

No evidence text available
LIMA1 affects PAN2
1 |
1 |

No evidence text available
LGALS8 affects PAN2
1 |
1 |

No evidence text available
L-thyroxine affects PAN2
| 1
| 1

reach
"The PCR product from the Pan 2 reaction was treated with T4 DNA polymerase (Pharmacia) to blunt the ends, and then digested with BamHl."
KRT9 affects PAN2
1 |
1 |

No evidence text available
KRT6A affects PAN2
1 |
1 |

No evidence text available
KRT2 affects PAN2
1 |
1 |

No evidence text available
KRT19 affects PAN2
1 |
1 |

No evidence text available
KRT18 affects PAN2
1 |
1 |

No evidence text available
KRT10 affects PAN2
1 |
1 |

No evidence text available
KIF11 affects PAN2
1 |
1 |

No evidence text available
KIAA1671 affects PAN2
1 |
1 |

No evidence text available
KCTD5 affects PAN2
1 |
1 |

No evidence text available
JUP affects PAN2
1 |
1 |

No evidence text available
IVNS1ABP affects PAN2
1 |
1 |

No evidence text available
IRS4 affects PAN2
1 |
1 |

No evidence text available
INA affects PAN2
1 |
1 |

No evidence text available
IGKV2-40 affects PAN2
1 |
1 |

No evidence text available
IGHG2 affects PAN2
1 |
1 |

No evidence text available
IGF2BP1 affects PAN2
1 |
1 |

No evidence text available
HSPD1 affects PAN2
1 |
1 |

No evidence text available
HSPA9 affects PAN2
1 |
1 |

No evidence text available
HSPA8 affects PAN2
1 |
1 |

No evidence text available
HSPA5 affects PAN2
1 |
1 |

No evidence text available
HSPA1A affects PAN2
1 |
1 |

No evidence text available
HSP90AB1 affects PAN2
1 |
1 |

No evidence text available
HSP90AA1 affects PAN2
1 |
1 |

No evidence text available
HNRNPU affects PAN2
1 |
1 |

No evidence text available
HNRNPM affects PAN2
1 |
1 |

No evidence text available
HNRNPH1 affects PAN2
1 |
1 |

No evidence text available
HNRNPD affects PAN2
1 |
1 |

No evidence text available
HNRNPA3 affects PAN2
1 |
1 |

No evidence text available
HNRNPA2B1 affects PAN2
1 |

No evidence text available
HNRNPA1 affects PAN2
1 |
1 |

No evidence text available
HIF1A affects PAN2
| 1
| 1

sparser
"In order to determine whether the effect of USP52 depletion on HIF1A mRNA stability was associated with a change in HIF1A poly(A) tail length, we analysed poly(A) tail length in U2OS cells treated with NT or USP52 siRNA."
HELZ affects PAN2
1 |
1 |

No evidence text available
HBB affects PAN2
1 |
1 |

No evidence text available
HBA1 affects PAN2
1 |
1 |

No evidence text available
HAND1 affects PAN2
1 |
HAND1 decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
HADHB affects PAN2
1 |
1 |

No evidence text available
HADHA affects PAN2
1 |
1 |

No evidence text available
H4C1 affects PAN2
1 |
1 |

No evidence text available
H2BS1 affects PAN2
1 |
1 |

No evidence text available
H2AZ1 affects PAN2
1 |
1 |

No evidence text available
H1-4 affects PAN2
1 |
1 |

No evidence text available
GST50DeltaC affects PAN2
| 1
PAN2 binds GST50DeltaC. 1 / 1
| 1

reach
"In contrast, preincubation of GST50DeltaC with the irrelevant oligomer, GBL, failed to inhibit the formation of the GST50DeltaC and PAN2 complexes."
GNG12 affects PAN2
1 |
1 |

No evidence text available
GNB4 affects PAN2
1 |
1 |

No evidence text available
GNB2 affects PAN2
1 |
1 |

No evidence text available
GNB1 affects PAN2
1 |
1 |

No evidence text available
GNAI3 affects PAN2
1 |
1 |

No evidence text available
GNAI2 affects PAN2
1 |
1 |

No evidence text available
GLG1 affects PAN2
1 |
1 |

No evidence text available
GATA1 affects PAN2
1 |
GATA1 decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
FLII affects PAN2
1 |
1 |

No evidence text available
FBL affects PAN2
1 |
1 |

No evidence text available
FARSA affects PAN2
1 |
1 |

No evidence text available
EXO affects YUH1
| 1
PAN2 binds YUH1 and EXO. 1 / 1
| 1

sparser
"The lack of base-specific interactions between Pan2 UCH-Exo and adenines was surprising given that Pan2 displayed strong specificity against guanosines ( xref )."
ERF affects PAN2
1 |
1 |

No evidence text available
EMD affects PAN2
1 |
1 |

No evidence text available
ELOC affects PAN2
1 |
1 |

No evidence text available
ELOB affects PAN2
1 |
1 |

No evidence text available
ELAVL1 affects PAN2
1 |
1 |

No evidence text available
EIF4ENIF1 affects PAN2
1 |

No evidence text available
EIF4B affects PAN2
1 |
1 |

No evidence text available
EIF3I affects PAN2
1 |
1 |

No evidence text available
EIF3H affects PAN2
1 |
1 |

No evidence text available
EIF3G affects PAN2
1 |
1 |

No evidence text available
EIF3B affects PAN2
1 |
1 |

No evidence text available
EFTUD2 affects PAN2
1 |
1 |

No evidence text available
EFHD2 affects PAN2
1 |
1 |

No evidence text available
EFHD1 affects PAN2
1 |
1 |

No evidence text available
EEF1G affects PAN2
1 |
1 |

No evidence text available
EBF3 affects PAN2
1 |
1 |

No evidence text available
DYNLL1 affects PAN2
1 |
1 |

No evidence text available
DSG2 affects PAN2
1 |
1 |

No evidence text available
DOCK7 affects PAN2
1 |
1 |

No evidence text available
DNAJA2 affects PAN2
1 |
1 |

No evidence text available
DNAJA1 affects PAN2
1 |
1 |

No evidence text available
DHX9 affects PAN2
1 |
1 |

No evidence text available
DHUs poly A tail affects PAN2
| 1
DHUs poly A tail inhibits PAN2. 1 / 1
| 1

eidos
"The introduction of two DHUs into a poly ( A ) tail strongly inhibits Pan2 activity relative to two uracils , which only cause a slight stall in deadenylation ( Fig. 4C ; Tang et al. 2019 ) ."
DBN1 affects PAN2
1 |
1 |

No evidence text available
CTTN affects PAN2
1 |
1 |

No evidence text available
CTNNA2 affects PAN2
1 |
1 |

No evidence text available
CREBBP affects PAN2
1 |
1 |

No evidence text available
CORO1C affects PAN2
1 |
1 |

No evidence text available
COL1A2 affects PAN2
1 |
1 |

No evidence text available
CNOT7 affects nuclease
| 1
CNOT7 binds PAN2, PAN3, nuclease, and ccr4. 1 / 1
| 1

sparser
"Collectively, our data support that Pan2Pan3 and Ccr4Caf1 poly(A) nuclease complexes can associate with each other to form a supercomplex in vivo."
CNN3 affects PAN2
1 |
1 |

No evidence text available
CNN2 affects PAN2
1 |
1 |

No evidence text available
CNBP affects PAN2
1 |
1 |

No evidence text available
CMBL affects PAN2
1 |
1 |

No evidence text available
CLTC affects PAN2
1 |
1 |

No evidence text available
CLTB affects PAN2
1 |
1 |

No evidence text available
CLTA affects PAN2
1 |
1 |

No evidence text available
CLNS1A affects PAN2
1 |
1 |

No evidence text available
CLINT1 affects PAN2
1 |
1 |

No evidence text available
CFL2 affects PAN2
1 |
1 |

No evidence text available
CEP170 affects PAN2
1 |
1 |

No evidence text available
CD59 affects PAN2
1 |
1 |

No evidence text available
CCT8 affects PAN2
1 |
1 |

No evidence text available
CCT6A affects PAN2
1 |
1 |

No evidence text available
CCT5 affects PAN2
1 |
1 |

No evidence text available
CCT4 affects PAN2
1 |
1 |

No evidence text available
CCT3 affects PAN2
1 |
1 |

No evidence text available
CCT2 affects PAN2
1 |
1 |

No evidence text available
CBWD2 affects PAN2
1 |
1 |

No evidence text available
CAPZB affects PAN2
1 |
1 |

No evidence text available
CAPZA2 affects PAN2
1 |
1 |

No evidence text available
CAPZA1 affects PAN2
1 |
1 |

No evidence text available
CALM1 affects PAN2
1 |
1 |

No evidence text available
CALD1 affects PAN2
1 |
1 |

No evidence text available
1 |
C646 compound increases the amount of PAN2. 1 / 1
1 |

No evidence text available
C15orf39 affects PAN2
1 |
1 |

No evidence text available
BOLA2 affects PAN2
1 |
1 |

No evidence text available
BLNK affects exonuclease
| 1
BLNK binds PAN2, exonuclease, and ccr4. 1 / 1
| 1

sparser
"Caf1 is a DEDD-family exonuclease in the Ccr4–Not complex with structural homology with the Pan2 exonuclease domain."
BASP1 affects PAN2
1 |
1 |

No evidence text available
BAG2 affects PAN2
1 |
1 |

No evidence text available
Aroclor 1254 affects PAN2
1 |
Aroclor 1254 decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
1 |
Air Pollutants decreases the amount of PAN2. 1 / 1
1 |

No evidence text available
ATP6V1B2 affects PAN2
1 |
1 |

No evidence text available
ATP5F1A affects PAN2
1 |
1 |

No evidence text available
ASF1B affects PAN2
1 |
1 |

No evidence text available
ARPC1B affects PAN2
1 |
1 |

No evidence text available
ARID3A affects PAN2
1 |
1 |

No evidence text available
ARCN1 affects PAN2
1 |
1 |

No evidence text available
AP2A2 affects PAN2
1 |
1 |

No evidence text available
ALYREF affects PAN2
1 |
1 |

No evidence text available
AIMP1 affects PAN2
1 |
1 |

No evidence text available
AIFM1 affects PAN2
1 |
1 |

No evidence text available
ACTR3B affects PAN2
1 |
1 |

No evidence text available
ACTC1 affects PAN2
1 |
1 |

No evidence text available
ACTB affects PAN2
1 |
1 |

No evidence text available
1 |

No evidence text available
17alpha-ethynylestradiol increases the amount of PAN2. 1 / 1
1 |

No evidence text available