IndraLab

Statements


CALM1 affects ACOD1
| 6324
| 6324

sparser
"The use of digital technology in dentistry has increased in recent years [ xref ], thanks to different computer-aided design and computer-aided manufacturing (CAD-CAM) systems being used to fabricate different types of prostheses [ xref ] and to intraoral scanners (IOSs) that allow us to obtain a full digital workflow from the impression to the delivery."

sparser
"The type of CAD-CAM manufacturing method-additive or subtractive-significantly influenced the trueness and internal fit of resin-based definitive crowns."

sparser
"The purpose of this in vitro study was to evaluate the denture base adaptation of computer-aided design and computer-aided manufactured (CAD-CAM) milled, 3D printed, and conventional heat-polymerized resin fabrication techniques."

sparser
"Maxillary and mandibular edentulous models fabricated from cobalt-chromium alloy were scanned, and 2-mm-thick denture bases were designed and fabricated by using 4 fabrication techniques and materials: CAD-CAM milled (CCM), 3D printed (3DP), injection molded (IM), and compression molded (CM)."

sparser
"Till now, the literature has not defined the minimum clinically acceptable marginal fit of CAD-CAM zirconia restoration."

sparser
"Zirconia frameworks milled by computer-aided design and computer-aided manufacturing (CAD-CAM) often require clinical adjustments."

sparser
"Time-consuming manual fabrication stages are eliminated thanks to CAD-CAM technology."

sparser
"Tested stains on CAD-CAM ceramic had varying color changes after aging."

sparser
"When the two CAD-CAM materials were compared, RNC showed superior flexural strength than PICN, regardless of the type of resin cement used."

sparser
"This study aimed to evaluate how the transmucosal contour of posterior single-tooth implant crowns, fabricated with CAD-CAM abutments, influences peri-implant soft tissue dimensions using the profile angle and crown ratio concepts."
SAFB affects CALM1
| 1585
| 1585

sparser
"HET-CAM."

sparser
"While both formulations showed good biocompatibility in the hen’s egg test on chorioallantoic membrane (HET-CAM), they substantially affected the three-dimensional U87 xenografts on the CAM, emphasized by PET/CT imaging and histological analysis. xref , xref "

sparser
"The 3Rs principle based on replacement, reduction, and refinement was derived from this directive and set the focus on the use of alternative methods. xref As early as 1985, HET-CAM contributed to the 3Rs principle and is now acknowledged as an alternative test option to the Draize test. xref It can be used to investigate the potential for irritation and the biocompatibility of a formulation."

sparser
"On EDD 9, HET-CAM was performed by applying 300 μL of each formulation (5 mg/mL) and monitoring the CAM over 5 min."

sparser
"The applied concentrations of PS in the HET-CAM were much higher than the phototoxic ones in vitro (see xref )."

sparser
"As expected from the HET-CAM results, visible responses could not be identified directly after application."

sparser
"The HET-CAM assay, which stands for the Hen’s Egg Test on Chorioallantoic Membrane, is a valuable assay for evaluating the effects of hydrogel formulations."

sparser
"The HET-CAM assay is also known for its speed and simplicity, making it a feasible alternative for evaluating potential irritant properties of formulations [ xref ]."

sparser
"HCEC test confers corneal biocompatibility while the HET-CAM relates to conjunctival (and vascular in general) effects."

sparser
"Further, it was observed that the complexation aided in the improved ex vivo retention and permeation, while the complexes were biocompatible as confirmed by the MTT and HET-CAM assay."
Dr affects CALM1
| 951
| 947

sparser
"Beyond acting as a physical barrier, the ECM also contributes to drug resistance through CAM-DR [ xref , xref , xref ]."

sparser
"These data suggest that MM cells share common regulatory pathways for drug resistance in different models, including SFM-DR and CAM-DR."

sparser
"The phenomenon of CAM-DR is particularly relevant in the context of drug resistance."

sparser
"It is accepted that CAM-DR contributes drug resistance to melphalan, vincristine, doxorubicin, mitoxantrone, and bortezomib [ xref , xref ]."

sparser
"MM cells also induce CAM-DR by binding BMSCs directly."

sparser
"Notably, the COL1 induced CAM-DR adds as an independent process to the pre-existing cisplatin resistance in W1CR cells, which is a novel and unexpected finding improving our understanding."

sparser
"However, some questions related to both CAM-RR and CAM-DR remain largely untouched."

sparser
"The interaction of tumor cells with their microenvironment allows tumor cells to be sheltered in the microenvironment and mediate drug resistance, called cell adhesion-mediated drug resistance (CAM-DR[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Currently, the most common model of CAM-DR is the spherical model, Fibronectin (Fn) model and matrix model [ 4 ]."

sparser
"In this study, we established the CAM-DR model of glioma cells using human Fn in vitro , and investigated the underlying mechanisms of TMZ insensitivity."

sparser
"In summary, Numbl plays a significant role in the formation of CAM-DR in MM cells."

sparser
"Observations in one study indicated that CAM-DR in MM cells was associated with increase in solubility and redistribution of c-FLIP L allowing its binding to and inhibiting death-inducing signaling complex (DISC) (which forms following CD95 ligation) and thus blocking apoptosis [ xref ]."

sparser
"For example, anticancer drug-induced H3K27 hypermethylation is associated with CAM-DR in MM cells [ xref ]."

sparser
"Finally, we showed that the interaction of Numbl with integrin β1 promotes the formation of CAM-DR in MM cells."
NUP214 affects CALM1
| 647
| 647

sparser
"We validated our pipeline using simulated and experimental data from the Cambridge Centre for Aging and Neuroscience (Cam-CAN) dataset."

sparser
"To test our claim, we evaluate the degree of neural coordination using phase synchrony measures xref at different regimes of alpha frequency band in resting-state MEG recordings collected from participants aged 18–88 at the Cambridge Center for Ageing and Neuroscience (Cam-CAN) xref ."

sparser
"MEG recordings from the Cam-CAN lifespan cohort (age range 18–88 years) were used to characterize the relationship of network frequency and phase coupling across age."

sparser
"We validate this hypothesis by employing two complementary measures of phase synchrony—Phase Locking Value (PLV) and Phase Lag Index (PLI) on source-reconstructed MEG data made publicly available by Cam-CAN."

sparser
"The spatial distribution of the CRON in the HCP and Cam-CAN samples is shown in xref A, B and C. As in the PRONIA study (Supplementary Fig. 2), the neurosignature comprised lower gray matter volume in cingulate, orbitofrontal, insular, temporal, parietal, and occipital brain regions, and higher cerebellar and prefrontal volumes."

sparser
"The proportion of CRON- Pos and CRON- Neg individuals is shown in xref C for the Cam-CAN sample and Supplementary Fig. 4 for the HCP sample."

sparser
"The distribution of decision scores in the Cam-CAN and HCP samples is shown in xref E. Even at uncorrected P-values, there was no association between decision scores and whole-brain gray matter volume in the young (r = 0.02, P = 0.82) and older Cam-CAN sub-sets (Pearson's r = 0.06, P = 0.28) and in the HCP sample (Pearson's r = −0.03, P = 0.27)."

sparser
"Specifically, although the CRON could detected in a subset of both the HCP- and Cam-CAN samples, its presence was not associated with dysfunction on any measure of social functioning."

sparser
"To get around the high cost of clinical trials, future studies could consider using large, publicly available databases such as the UK Biobank ( Cox et al., 2016 ) and Cam-CAN ( Taylor et al., 2017a )[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"To test this hypothesis, the CHR-outcome-neurosignature derived from the PRONIA study, was used to build a binary classifier which was applied to sMRI data of participants from the Human Connectome Project (HCP) ( xref ) and the Cambridge Centre for Ageing and Neuroscience project (Cam-CAN) ( xref )."
MLLT10 affects CALM1
| 357
| 349

sparser
"Similarly, knockdown of TGM2 mirrored the effects of CTCF KO, impairing the proliferative capacity of CALMAF10 AML cells and promoting macrophage‐like differentiation."

sparser
"However, TGM2 overexpression could not rescue the CTCF knockout phenotype (Figure  xref ), suggesting that TGM2 functions as only one component of CTCF's broader regulatory network governing CALMAF10 AML differentiation."

sparser
"These findings strongly support the existence of a CTCF–TGM2 regulatory axis critical for maintaining the undifferentiated state of CALMAF10 AML cells."

sparser
"GK921 [ xref , xref , xref , xref , xref ] (Selleck Biotech, Kanagawa, Japan), a TGM2 inhibitor, was investigated in CALMAF10 AML cells."

sparser
"Within this subgroup of immature T-ALL, CALM-AF10 fusions are mostly seen in the AYA population with a median age of 25 years old, and are associated with an early resistance to treatment and a poor o[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Oncogenic transcription factors can be divided into several groups: TAL1/2 , LMO1 /2, TLX1 /3, LYL , HOXA- translocations, MEF2C , NKX1/2 , CALM::AF10 , and KMT2A -rearrangements ( KMT2A -r)."

sparser
"May Grunwald Giemsa staining and FACS analysis confirmed that GK921 induced differentiation of CALMAF10 AML cells into macrophage‐like cells, as evidenced by increased expression of F4/80 (Figure  xref )."

sparser
"MN1 (Meningioma-1) is frequently over-expressed in AML patients and is associated with a poor prognosis. xref – xref However, in patients with inv(16), highest MN1 expression has been reported with favorable prognosis to current therapeutics. xref MN1 functions as a transcriptional regulator that co-operates with the nuclear receptors for retinoic acid (RAR) and vitamin D, by acting as co-activator or co-repressor, depending on the interacting partners. xref – xref In addition, MN1 is frequently over-expressed and occasionally fused to TEL as part of the rare MN1-TEL translocation. xref Mn1 is known to be co-operating partner of several oncogenic fusion genes (NUP98–HOXD13, xref CALMAF10, xref MLL–AF9 xref and MLL–ENL) xref and mutated RUNX1, xref and as a common target of insertional mutagenesis in a hematopoietic stem cell (HSC) gene therapy trial, xref thereby promoting leukemogenesis."

sparser
"These results indicate that GK921 effectively targets the undifferentiated state and proliferation of CALMAF10 AML cells."

sparser
"Furthermore, ChIP‐qPCR analysis revealed that CALMAF10 binds to the HOXA locus but not to the TGM2 locus, suggesting that TGM2 is unlikely to be a direct transcriptional target of CALMAF10 (Figure  xref )."
| 8

sparser
"The observation that CRM1 binds Hoxa chromatin in CALM-AF10 expressing MEFs led us to question whether CRM1 is also present at HOXA loci in leukemia cells."

sparser
"We have demonstrated that in addition to mediating nuclear export of CALM-AF10, the interaction of CRM1 with CALM-AF10 directly regulates HOXA cluster gene expression."

sparser
"We have demonstrated that a CRM1-AF10 fusion protein phenocopies CALM-AF10 in its ability to bind and activate Hoxa and Meis1 genes and to induce leukemia, supporting a model in which CRM1 enables the tethering of CALM-AF10 to Hoxa and Meis1 effector genes, thereby recruiting the AF10/DOT1L transcriptional complex and causing leukemia."

sparser
"CALM-AF10 interacts with Crm1 via a Nuclear Export Signal (NES) contained in the CALM moiety, and mutation of the NES or pharmacological inhibition of the Crm1/NES interaction abolishes the ability of CALM-AF10 to bind to and activate the transcription of Hoxa genes."

sparser
"Interaction of CALM-AF10 with CRM1 is necessary to upregulate Hoxa gene expression."

sparser
"Together, these results suggest that the interaction of CALM-AF10 with CRM1 is necessary for upregulation of Hoxa cluster gene expression."

sparser
"Our results thus far support a model in which CALM-AF10 must interact with CRM1 (via the NES) to upregulate Hoxa gene transcription."

sparser
"Our observation that CALM-AF10 interacts with Hoxa chromatin in a CRM1-dependent manner led us to hypothesize that CRM1 itself may bind Hoxa loci thus allowing for recruitment of CALM-AF10."
USP9X affects CALM1
| 205
| 205

sparser
"The agreement between the family member’s detection of delirium in the case vignette was moderate using the FAM-CAM (kappa = 0.44) and substantial using the Sour Seven (kappa = 0.75)."

sparser
"This included 78% and 92% of participants correctly classifying delirium in the provided case vignettes using the FAM-CAM and Sour Seven, respectively."

sparser
"In addition, the readability of the FAM-CAM (Flesch-Kinkaid reading level ~11 th grade) and the Sour Seven (Flesch-Kinkaid reading level ~12 th grade) are higher than the suggested grade six level."

sparser
"Efforts to improve the readability of the FAM-CAM and Sour Seven may improve family member’s understanding of the questionnaires and may improve their identification of disorganized thinking and altered level of consciousness."

sparser
"In this issue of CCM, Fiest et at [ref] present results from a diagnostic accuracy study in which they test two family administered delirium screening tools, the Family Confusion Assessment Method (FAM-CAM) ( xref ), and the Sour Seven ( xref ) against the diagnosis of delirium according to the Diagnosis and Statistical Manual of Mental Disorders, Edition 5 (DSM-5)."

sparser
"In previous studies, some of the trained interviewers using the CAM were not blinded to the FAM-CAM results and used the results of the FAM-CAM to score specific CAM items, such as acute change."

sparser
"These approaches likely increased agreement between the FAM-CAM and CAM ratings. xref "

sparser
"However, in at risk patients in the ED where delirium status was unclear it would be feasible for a nurse or physician to provide a copy of the FAM-CAM to caregivers to complete."

sparser
"Results from the FAM-CAM could then be used by clinicians to inform their own assessments for delirium and subsequent medical decision making."

sparser
"An additional benefit of the FAM-CAM is that it may empower caregivers to assess for delirium in family members outside the hospital and seeking medical care in a timely fashion."
CALM1 affects B3LYP
| 203
B3LYP binds CALM1. 10 / 203
| 203

sparser
"With CAM-B3LYP a further fine-tuning of the calculated electronic energy is provided."

sparser
"Time-dependent DFT calculations were carried out in both the singlet and triplet state at CAM-B3LYP xref /LANL2DZ level of theory using the default continuum model (PCM) to introduce the solvent effect."

sparser
"Yet, the relative stability of the isomers containing a given number of HS centres differs according to the relation CAM-B3LYPB3LYP > B3LYP*."

sparser
"The plots of Δ G ( T ) calculated with B3LYP and CAM-B3LYP of all spin isomers of 1, 2, 2a and 3 are shown in xref and xref ."

sparser
"For this reason ultimately experimental and CAM-B3LYP results are compared with each other."

sparser
"It was shown that all excitation wavelengths were lowered when CAM-B3LYP was used (in contrast to B3LYP results)."
| PMC

sparser
"UV–vis absorption spectra (in the gas phase and ethanol) were examined by TD-DFT using B3LYP, CAM-B3LYP, PBE, PBE0, ωb97X-D, M06-2X, and CIS methods with the 6–311+G(d,p) basis sets for 2OHPhAZ ."

sparser
"Among the plethora of functionals, the most often used to simulate the spectra of porphyrins are: B3LYP, CAM-B3LYP, and PBE0 [ xref , xref , xref , xref , xref , xref ]."
| PMC

sparser
"The success of CAM-B3LYP (and other range-separated functionals) is due to the fact that it includes a long-range correction of the exchange potential, which incorporates an increasing fraction of Hartree–Fock (HF) exchange as the interelectronic separation increases."
| PMC

sparser
"All electronic structure calculations were performed with the ORCA software package (version 5.0.3). xref Each set of calculations was conducted using five different density functionals: the hybrid density functionals PBE0 xref , xref and B3LYP, xref , xref as well as the range-separated hybrid functionals LRC-ωPBEh, xref CAM-B3LYP, xref and ωB97X. xref No optimization of the range-separation parameter ω was done."
GO affects CALM1
| 187
CALM1 binds GO. 10 / 187
| 187

sparser
"As an example of a successful project, the Gene Ontology knowledge base is described, which not only includes terminological knowledge and gene ontology annotations (GOA), but also causal influence models (GO-CAM)."

sparser
"We have released version 2 of a comprehensive set of integrated, reviewed annotations for human genes, which we call the “functionome.” We have also dramatically increased the number of GO-CAM models, with over 1500 models of metabolic and signaling pathways, primarily in human, mouse, budding and fission yeast, and fruit fly."

sparser
"Over 300 GO-CAM models are currently available for mouse currently ()."

sparser
"More precisely, a GO-CAM links the activities (GO MFs) of gene products together by causal relations that specify the effect of one activity on the other."

sparser
"All other upstream and downstream molecular functions/biological processes will be modeled in GO-CAM with causal relationships between them and the MAPK cascade."

sparser
"GO-CAM models and associated tooling are gradually replacing the traditional GO annotation process within the Alliance for Genomic Resources ( xref ), meaning that future GO annotation will produce an increasingly rich, manually curated KG."

sparser
"This restructuring aligned the ontology with emerging principles of ontological clarity promoted by the Common Anatomy Reference Ontology (CARO) and supported compositional reasoning in GO-Causal Activity Modeling (GO-CAM) ( xref ; xref )."

sparser
"Hence, a model concept called GO Causal Activity Modeling (GO-CAM) was introduced in 2018 to extend the existing annotation to represent a complex statement that can be scalable and structured [ xref ]."

sparser
"Causal networks in GO-CAM models also enable entirely new applications, such as network analysis of genomic data and logical modeling of biological systems."

sparser
"The ongoing “Causal Activity Model” project (GO-CAM; [ xref ]) is going one step further in expressiveness with the design of refined properties between GO-BP and GO-MF."
| PMC
CamB affects CALM1
| 150
| 150

sparser
"This study explores the therapeutic potential of andrographolide (AND), a bioactive compound derived from Andrographis paniculata , in mitigating cervical cancer progression using the chick embryo chorioallantoic membrane patient-derived xenograft (CAM-PDX) model."

sparser
"Although we have shown transplanting CAM-PDXs is possible, there was no evidence for expansion of the material and given the limitations observed with passaging PDX in mice, researchers should carefully consider whether this is necessary."

sparser
"In the CAM-PDX model, AND significantly inhibited tumor growth, primarily by reducing angiogenesis and vessel density."

sparser
"In summary, this study successfully established a reproducible CAM-PDX model for drug evaluation and highlighted the potential of AND as a promising therapeutic candidate for cervical cancer, warranting further clinical investigation."

sparser
"The option to test treatments in a rapid manner using the CAM-PDX platform, where turnaround time can be weeks instead of months, is highly desirable for cancers with poor prognosis such as mesothelioma, where patients may only survive a few months after their diagnosis."

sparser
"We propose that as the model is moderate throughput, drug evaluation can be conducted on first generation (P0) CAM-PDXs, potentially further reducing numbers, as it would remove the standard practice of serial passaging in mice."

sparser
"Chorioallantoic membrane patient-derived xenograft (CAM-PDX) models, which combine the strengths of PDX and CAM systems, offer reduced experimental costs alongside enhanced visualization and operability."

sparser
"Studies have reported an impressive success rate of 80%–100% in CAM-PDX models across various cancer types, including glioblastoma multiforme, sarcoma, and renal cell carcinoma [ xref , xref ]."

sparser
"In this study, we utilized a chick embryo CAM xenograft model (CAM-PDX) to evaluate the therapeutic potential of AND in cervical cancer treatment."

sparser
"This study highlights the potential of AND as a therapeutic agent and validates the CAM-PDX model as a reliable platform for further investigation into treatments for cervical cancer."

sparser
"Our first aim is to assess the feasibility of CALM-IT as a mobile-paradigm."

sparser
"CALM-IT adoption and completion."

sparser
"CALM-IT therapists received comprehensive CALM training at the Ferrara coordinating center."

sparser
"The development of CALM-IT would allow clinicians and researchers to screen for and track inhibitory control deficits in the community."

sparser
"Finally, we assessed clinical relevance through associations of CALM-IT performance and parent- and child-reported symptoms of anxiety, irritability, and ADHD."

sparser
"We anticipated deficits in CALM-IT inhibitory control performance would be associated with increased levels of psychopathology."

sparser
"CALM-IT feasibility and engagement."

sparser
"Only five participants (2.5%) aborted CALM-IT prior to completion."

sparser
"Four participants (2%) completed CALM-IT, but their data was not collected due to technical issues."

sparser
"Of the remaining participants, eight participants were excluded from analyses of CALM-IT levels 1–5 and 12 participants were excluded from analyses of levels 6–10, due to technical difficulties impacting the number of targets and stars presented."
CALM1 is modified
| 63 21
CALM1 is phosphorylated.
| 35 21
CALM1 is phosphorylated. 10 / 56
| 35 21

sparser
"All reactions were monitored by thin layer chromatography (TLC) carried out on Merck silica gel plates (0.25 mm thick, 60F254), visualized by using UV (254 nm) or dyes such as ninhydrin, KMnO 4 , p -a[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Interestingly, we observed that phosphorylation of CaM1 only has a modest impact on its affinity for calcium."

rlimsp
"In the presence of low calcium concentrations and in the absence of cytosol, the phosphorylation of CaM-BP103/97 is, on a molar basis, equal to or greater than that of proteins 4.1 and 4.9."

rlimsp
"However, it is not known whether this is due to direct activation, or calmodulin-dependent protein phosphorylation, or both."

sparser
"The basal and agonist induced phosphorylation of CAM was carefully analyzed ( Thomas et al., 2000 )."

sparser
"An involvement of mTORC2 in calcium regulation in muscle is also supported by the decrease in the phosphorylation of calmodulin 1 (CALM1) in Ric mKO muscle, since calmodulins are calcium ion sensor proteins that transduce most of the calcium signalling to downstream protein kinases and phosphatases (Marcelo et al. 2016)."

sparser
"The analyses exhibited a sharp overexpression as well as a potential correlation of E p CAM to the LC development."

sparser
"Surprisingly, no increase of CAM basal phosphorylation was observed in comparison to the WT receptor."

sparser
"After salt-induced CAM induction, the six genes were expressed with more prominent fluctuations than before stress, suggesting that these PP2C genes may be involved in the diurnal regulation of protein phosphorylation in CAM."

rlimsp
"These results suggest that GMCHA, a potent inhibitor of histamine release from mast cells, suppresses platelet secretion, relaxes vascular smooth muscle and inhibits Ca2+, CaM-dependent protein phosphorylation, all at similar concentrations."
CALM1 is acetylated.
| 10
CALM1 is acetylated. 10 / 10
| 10

sparser
"Interestingly, as reported above, the acetylation of CALM 1 at its NH 2 -terminal (CALM 8) resulted in a complete loss of its inhibitory activity."

sparser
"All CAM acetyltransferases share similar molecular strategies in acetylating CAM."

sparser
"This may be due to the lower affinity of Myo1 for unmodified Cam1, which would bring about dissociation of the two proteins at lower concentrations of cellular calcium, despite the pCa of the interaction being unaffected by Cam1 acetylation, and therefore failure to associate with the membrane."

sparser
"Using biochemical analysis of recombinant bacterially expressed amino‐terminally acetylated Cam1, we show this post‐translational modification impacts the helical structure and thermal stability of the Cam1 protein, enhancing its sensitivity to Ca 2+ and affinity for its major cellular binding partner, Myo1."

sparser
"Cam1 amino‐terminal acetylation affects calmodulin organisation and dynamics in vivo ."

sparser
"Using this reported protein, we have previously shown that two molecules of acetylated Cam1 associate with the Myo1 IQ12 ‐FRET protein in a calcium‐dependent manner [ xref ]."

sparser
"In addition, interactions can also be measured in vitro by determining the degree of acetylation of CAM in bacterial lysates."

sparser
"Following the initial acetylation, non-enzymatic transfer of the acetyl group onto the adjacent 1-hydroxyl group allows for a second CAT-catalysed acetylation at the 3-hydroxyl group producing a di-ac[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"DoerflerlFEBS Letters 344 (1994) 251 254 [12,19] and expressed as percent conversion of chloramphenicol (CAM) to acetylated CAM forms during a 1 h incubation."

sparser
"It is worth noting that the proportion of native yeast Cam1 that is acetylated on its amino‐terminus within the yeast cell (40%) [ xref ], generating a subpopulation of CaM with distinct biophysical properties, coincides precisely with the proportion of discrete Cam1 foci (40%) that associates with Myo1 in the fission yeast cell [ xref ]."
CALM1 is methylated.
| 9
CALM1 is methylated. 9 / 9
| 9

sparser
"Methylation of CAM may be correlated with risk and prognosis of ovarian cancer."

sparser
"Based on the data from TCGA, we analyzed CALM1 methylation levels between normal and cancer specimens."

sparser
"The results collectively suggested that CALM1 methylation plays a significant and complicated role in human cancers; however, more in-depth research is needed to verify this conclusion."

sparser
"The results showed CALM1 methylation to be significantly increased in cervical and endocervical cancer (CESC) and COAD compared with that in normal tissues, but significantly decreased in LIHC and PCPG ( xref ), showing an inverse trend compared with that of the expression pattern."

sparser
"The recently completed genome of pineapple has and will continue to facilitate many areas of research in this species, and the present work focuses on the regulatory impact of DNA methylation on CAM pathway-related genes using temporal and spatial methylome and transcriptome analysis."

sparser
"DNA methylation of CALM1 regulated its expression in multiple cancers."

sparser
"A term placenta study, however, did not find DNA methylation of CALM1 to be sexually dimorphic [ xref ]."

sparser
"Additionally, we found CALM1 methylation to be significantly increased in CESC and COAD compared with normal tissues and significantly decreased in LIHC and PCPG, showing an inverse trend compared with that of the expression pattern."

sparser
"LMP1 activates DNMTs through c-Jun NH2-terminal kinase (JNK) signaling, induces the promoter methylation of calmodulin 1 ( CDH-1 ), and downregulates calmodulin E ( E -cadherin) expression [ xref , xref ]."
CALM1 is glycosylated.
| 9
CALM1 is glycosylated. 9 / 9
| 9

sparser
"Based on these results, it was concluded that there were significant differences in the glycosylation of ARH and THC cell-CAM 105."

sparser
"CD146 is a highly glycosylated junctional CAM involved in the control of vascular vessel integrity."

sparser
"The much more hydrophobic, highly glycosylated cell-CAM binds to the column."

sparser
"In addition, studies in our laboratories have been performed and are still in progress, mainly aimed to elucidate the expression and significance of the CAM glycosylation patterns, as well as to identify and characterize membrane molecular components implicated in the ion transport processes which occur in the chorionic epithelium [ xref – xref ]."

sparser
"Thus, these findings suggest that differential glycosylation of a widely expressed neural CAM can functionally regulate neuronal outgrowth and synapse formation of distinct neuronal subpopulations."

sparser
"Recent studies have been unable to replicate initial work, which suggested that MMF impaired glycosylation of lymphocyte CAM."

sparser
"Additionally, the glycosylation of HSLFHPEDTGQVFQVSHSFPHPLYN102M CAM SLLK peptide was identified, where M CAM represents carbamidomethylaion of methionine residue."

sparser
"NCAM120 is a prominent example of a glycosylated GPI-anchored IgSF CAM ( xref ), because similarly to transmembrane NCAM isoforms it can carry polysialic acid (PSA) ( xref )."

sparser
"Further advances in production of metal coatings with finer granularity, together with improvements in imaging (tilting and angle of stereo images), may provide better definition of the topography associated with glycosylation and formation of multimeric CAM complexes. (J Histochem Cytochem 49:809-819, 2001)"
CALM1 affects CALM
| 29 50 2
CALM1 binds CALM.
| 24 50
| 24 50

reach
"NMR spectral assignments for the CaM/CaM1 complex were reported previously (BMRB accession number 51222)."

reach
"The NMR-derived structure of CaM/CaM1 reveals intermolecular contacts with the CaM1 residue, F575, that points toward the Ca -occupied N-lobe of CaM bound to CaM1 (Figure 4B)."

sparser
"The ITC results indicate that CaM2 binds to the CaM C-lobe with higher affinity than the CaM N-lobe, in contrast to CaM1 that binds to the CaM N-lobe with higher affinity."

sparser
"The PDE1 activation process involves Ca 2+ binding to the free CaM region, which results in the activation of the Ca 2+ -CAM and changes in the conformation of the PDE1 structure (Ca 2+ -CaM*-PDE1)."

sparser
"These results imply that a single CaM may bind to CNGB1 in which the CaM N-lobe is bound to CaM1 and the CaM C-lobe is bound to CaM2."

sparser
"It was shown that GAD activity is induced by two different mechanisms: (i) in intact plant tissue and neutral pH GAD activity is stimulated in a Ca 2+ -dependent manner by binding of calmodulin to the CAM-binding site ( xref ); (ii) after wounding of plant cells the vacuolar content is released and the cytosol is acidified which leads to a Ca 2+ -independent activation of GADs ( xref )."

sparser
"NMR-Derived Structures of CaM Bound to the CaM1 Peptide."

sparser
"The results of the native gel and fluorescence assays demonstrate that Fh CaM1 binds to the calmodulin binding domain of Fh PMCA."

sparser
"The binding of CaM to the CaM1 peptide revealed a biphasic ITC isotherm in which two CaM1 molecules are bound to one CaM molecule at saturation ( xref )."

sparser
"A recent NMR structure of CaM bound to a peptide fragment of CaM1 [ xref ] reveals that the Ca 2+ -bound CaM N-lobe binds stably to CaM1 ( xref B), but the Ca 2+ -bound CaM C-lobe binds to CaM1 with much lower affinity, which prevents determination of its structure [ xref ]."
CALM1 activates CALM.
| 4
CALM1 activates CALM. 4 / 4
| 4

reach
"Moreover, the expression of Map1b -TP in the axon compartment significantly increased the amount of MAP1B but not the amount of calmodulin, whereas the expression of Calm1 -TP increased the axonal syn[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

reach
"Calm1 , the calmodulin-binding protein-1, can progress cell cycle, activate calmodulin-dependent protein kinase II, and promote microtubule assembly."

reach
"On the other hand, calcium ion–related proteins were upregulated, including CaM produced by the CALM1 gene."

reach
"These results suggest that CaM is produced by the CALM1 gene in the early-stage HDFs with an altered dermal composition, and that they are activated in the biological pathways associated with calcium ions.Since calcium signaling is presumably associated with the differentiation of fibroblasts in the elastin-variable hydrogel environments, we assessed the expression of S100A4 (also called fibroblast-specific protein 1, FSP1), which is a marker of differentiated fibroblasts as well as a calcium-binding protein."
CALM1 phosphorylates CALM.
| 1 2
CALM1 phosphorylates CALM. 3 / 3
| 1 2

rlimsp
"Although CaM-kinase II weakly phosphorylated CaM under the same conditions, CaM-kinase I, CaM-kinase kinase alpha, and cAMP-dependent protein kinase did not phosphorylate CaM."

rlimsp
"Although CaM-kinase II weakly phosphorylated CaM under the same conditions, CaM-kinase I, CaM-kinase kinase alpha, and cAMP-dependent protein kinase did not phosphorylate CaM. Polycations such as poly(Lys) were required for the phosphorylation."

reach
"Call CaM- dependent phosphorylation of endogenous tracheal smooth muscle membrane proteins as a function of [Ca 2 *] free (A) or [CaM] (B)."
Ubiquitin affects CALM1
| 76

sparser
"The current study compares the salary-related cost of implementing the UB-CAM with and without the skip pattern at the bedside, as administered by the three types of clinicians noted above (see xref )."

sparser
"Three-hundred ninety-nine clinicians, including 53 physician hospitalists, 236 nurses, and 110 CNAs, participated, and were briefly trained in the UB-CAM prior to participating in the study."

sparser
"As expected, the average per screen cost of administering the UB-CAM ($1.10 for nurses, $3.61 for physicians) were lower than for the UB-CAM-without skip ($1.66 for nurses, $5.59 for physicians)."

sparser
"The cost of the simulated CNA-nurse UB-CAM (CNA first step, nurse second step when needed) was slightly lower than the nurse UB-CAM ($0.78 versus $1.10)."

sparser
"The lowest cost option for implementing the UB-CAM would be the simulated CNA/Nurse protocol, which would cost $42,339 in a 300-bed hospital."

sparser
"The nurse conducted UB-CAM was slightly more expensive at $63,016, and the hospitalist-conducted UB-CAM was much more expensive at $209,407 in a 300-bed hospital."

sparser
"The lowest costs per screen were the CNA nurse UB-CAM at 78 cents per screen and nurse UB-CAM at $1.10 per screen."

sparser
"Understanding screening costs supports our previous work showing the feasibility, accuracy, and efficiency of the UB-CAM and describing barriers and facilitators of screening for delirium. xref , xref "

sparser
"A third limitation is that the CNA-nurse UB-CAM protocol was not explicitly implemented in our study."

sparser
"The UB-CAM was generally positively received by all three clinician types."
Mycs affects CALM1
| 75
| 75

sparser
"To assess test–retest reliability and sensitivity to change, students (n=91) completed the CAM-MYCS at baseline and 1 week after exposure to information on lifestyle-related cancer causes or control information."

sparser
"Construct validity was tested by comparing CAM-MYCS scores between cancer experts (n=25) and students (n=91)."

sparser
"CAM-MYCS scores improved (fewer myths endorsed) among students exposed to information on cancer causes compared with the control group (p<0.001) and showed high test–retest reliability (r=0.90, p<0.001)."

sparser
"With respect to behavioral and lifestyle factors, overweight or obese participants had higher CAM-MYCS median scores than those with normal BMI (p = ."

sparser
"Cancer experts reported higher CAM-MYCS scores (fewer myths endorsed) than students (p<0.001)."

sparser
"The factor structure of the CAM-MYCS was confirmed in the national sample and internal reliability was high (α=0.86)."

sparser
"However, the focus of this study was to examine CC causation myths that were included in the validated CAM-MYCS [ xref ]."

sparser
"The CAM-MYCS model was also significant (F = 6.85, p < ."

sparser
"Inclusion of the CAM-MYCS alongside items assessing knowledge of actual cancer causes did not affect responses."

sparser
"No significant differences were found in CAM-MYCS median scores based on smoking status, physical activity, or alcohol consumption (p = ."
CALM affects CALM1
| 24 50
| 24 50

reach
"NMR spectral assignments for the CaM/CaM1 complex were reported previously (BMRB accession number 51222)."

reach
"The NMR-derived structure of CaM/CaM1 reveals intermolecular contacts with the CaM1 residue, F575, that points toward the Ca -occupied N-lobe of CaM bound to CaM1 (Figure 4B)."

sparser
"The ITC results indicate that CaM2 binds to the CaM C-lobe with higher affinity than the CaM N-lobe, in contrast to CaM1 that binds to the CaM N-lobe with higher affinity."

sparser
"The PDE1 activation process involves Ca 2+ binding to the free CaM region, which results in the activation of the Ca 2+ -CAM and changes in the conformation of the PDE1 structure (Ca 2+ -CaM*-PDE1)."

sparser
"These results imply that a single CaM may bind to CNGB1 in which the CaM N-lobe is bound to CaM1 and the CaM C-lobe is bound to CaM2."

sparser
"It was shown that GAD activity is induced by two different mechanisms: (i) in intact plant tissue and neutral pH GAD activity is stimulated in a Ca 2+ -dependent manner by binding of calmodulin to the CAM-binding site ( xref ); (ii) after wounding of plant cells the vacuolar content is released and the cytosol is acidified which leads to a Ca 2+ -independent activation of GADs ( xref )."

sparser
"NMR-Derived Structures of CaM Bound to the CaM1 Peptide."

sparser
"The results of the native gel and fluorescence assays demonstrate that Fh CaM1 binds to the calmodulin binding domain of Fh PMCA."

sparser
"The binding of CaM to the CaM1 peptide revealed a biphasic ITC isotherm in which two CaM1 molecules are bound to one CaM molecule at saturation ( xref )."

sparser
"A recent NMR structure of CaM bound to a peptide fragment of CaM1 [ xref ] reveals that the Ca 2+ -bound CaM N-lobe binds stably to CaM1 ( xref B), but the Ca 2+ -bound CaM C-lobe binds to CaM1 with much lower affinity, which prevents determination of its structure [ xref ]."
EP affects CALM1
| 63
CALM1 binds EP. 10 / 63
| 63

sparser
"CD24, CD26, CD44, CD133, CD166, CD34, aldehyde dehydrogenase (ALDH) and EpCAM (also called CD326 or epithelial‐specific antigen/ESA) are some examples of CSC‐specific surface markers."

sparser
"Using a panel of monoclonal antibodies to keratinocyte differentiation and proliferation markers, we investigated the association of EP-CAM expression with differentiation-related and/or neoplastic changes in cervical epithelium."

sparser
"The pro-metastatic effect of G9a observed in lung cancer is attributed to gene silencing of epithelial cell adhesion molecule (ep-CAM ), enhancing invasion [ xref ]."

sparser
"TNFR2 ligands were mainly on CD45 − EP-CAM + lung epithelial cells at steady state (Fig.  xref )."

sparser
"To employ the hybrid plan, magnetite nanoparticles were bound to MCF-7 cells through the specific EP-CAM antibodies."

sparser
"The embryos were analyzed under a microscope (Olympus CKX53), and images were captured using an Olympus EP50 camera (CAM-EP50) The length and width of embryos after hatching were measured using EPview1.3 software at 96 hpf."

sparser
"For flow cytometric analysis of myCAF, iCAF, and apCAF populations, cells were stained for 30 min with anti‐mouse CD31‐FITC (102405, BioLegend), CD45‐APC/Cy7 (557659, BD), CD326 (EpCAM)‐BV421 (118225, BioLegend), PDPN‐APC (127410, BioLegend), Ly6C‐PE (128008, BioLegend), and I‐A/I‐E (MHC‐II)‐PE/Cy7 (107630, BioLegend)."

sparser
"EpCAM, as a downstream target gene of Wnt/β‐catenin signal, was positively expressed in non‐responders, which means EpCAM could be a biomarker for IFNAR2‐positive patients resistant to IFN/5‐Fu. xref "

sparser
"Western blotting was used to evaluate the expression of ASPP2, LAMB3, HSPB1, EP-CAM, and Ki67 ( xref )."

sparser
"Expression of CDCP1 in cell lines is similar to that of the well documented tumour markers CEA and EP-CAM and like these molecules, CDCP1 might prove to be a useful therapeutic target."
NET affects CALM1
| 61
NET binds CALM1. 10 / 61
| 61

sparser
"In the recent phase IV, prospective, open-label, exploratory study “Circulating Tumour Cells in Somatuline Autogel Treated NeuroEndocrine Tumors Patients” (CALM-NET) investigating the effect of the administration of 120 mg lanreotide AG every 28 days on CS symptoms, 70.6% of treated patients had an at least 50% reduction in diarrhea episodes and 77.1% in flushing episodes at follow-up [ xref ]."

sparser
"To overcome these challenges, we developed a platform named Branched CALM-Net that aims to predict students’ stress levels through dynamic clustering in a personalized manner."

sparser
"In the cold-start online learning setting, Branched CALM-Net outperforms other models, attaining an average F1 score of 87% with just 1 week of training data for a new student, which shows it is reliable and effective at predicting stress levels from mobile data."

sparser
"The standard version of our proposed method is called the Cross-personal Activity LSTM Multitask Network (CALM-Net), a system designed specifically to deal with inter-subject variability."

sparser
"An effect of CTC presence on the effectiveness of somatostatin analog (SSA) treatment has been evaluated in the CALM-NET trial; patients with no detectable CTC might be more likely to respond positively to the treatment [ xref ]."

sparser
"CALM-Net learns personalized parameters by considering each subject as a task in a multitask learning structure."

sparser
"With shared and individual parts, CALM-Net can learn both the shared dynamics of the data between all subjects as well as personalized characteristics."

sparser
"We also propose Branched CALM-Net, a variant of CALM-Net designed to find and share parts of the network among similar subjects."

sparser
"Branched CALM-Net combines multitask learning with the Learn-to-Branch technique to efficiently model both personal and population-level characteristics."

sparser
"Here we present CAM-Net, a context-aware microbial correlation framework that fundamentally departs from pairwise approaches."
| PMC
Ig affects CALM1
| 57
| 57

sparser
"DSCAM is a member of the cell adhesion molecule (Ig-CAM) immunoglobulin superfamily and is involved in the development of the human central and peripheral nervous system."

sparser
"They relate with ECM components through syndecan and integrins molecules and with neighbouring cells through members of the selectin, Ig-CAM families and cadherin, which coordinate signalling and structural functions."

sparser
"For example, dysregulation of Phgdh , Eno1 and Gapdh , three functionally linked glycolytic enzymes in module M3 suggests that lower levels of Blimp-1 are impacting on metabolic fitness and the acquisition of Ig-CAM adhesion molecules in M13 such as Icam1 , Bcam and Epcam argues for altered adhesive properties."

sparser
"Interactions between the Ig-domains of C-CAM may be the structural basis for the specific homophilic binding."

sparser
"On the other hand, eight members are membrane-anchored MMPs, including 4 MMPs with type I transmembrane domain (MMP-14, MMP-15, MMP-16, and MMP-24), two glycosylphosphatidylinositols (GPI)-anchored (M[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Cells at the migratory pole of tumor masses upregulate genes associated with migration and epithelial-to-mesenchymal transition (EMT); vimentin ( VIM ), N-cadherin ( CDH2 ), epidermal growth factor receptor (EGFR) ( ERbB2 ) and downregulate genes associated with cellular adhesion (E-cadherin, Ig-CAM, selectins), in contrast to other cells in the mass which rather may be primed for proliferation and maintenance of the mass. xref , xref Another example reflects the selective pressure of hypoxia, wherein cells in the center of a larger tumor mass undergo programmed necrosis that together facilitate the upregulation of genes associated with angiogenesis; vascular endothelial growth factor ( VEGF) , angiopoietin-1 ( Ang-1 ), and angiopoietin-2 ( Ang-2 ). xref Within this changing environment, it cannot be forgotten that tumor cells are also undergoing immunoediting, with a changing profile that permits the induction of immune tolerance. xref , xref Moreover, while the immunogenicity of hormone-dependent breast cancers, may be regarded as low in comparison to the triple-negative breast cancers, xref that tumors are able to subvert immune cells to use secreted factors for tumor progression is of interest. xref Tumors can recruit a multitude of immune cells including myeloid-derived suppressor cells (MDSCs), which retain the capacity to differentiate into macrophages, granulocytes, and dendritic cells for example. xref Secreted factors from MDSCs including interleukin (IL)-6, transforming growth factor beta (TGF-β), and matrix metalloproteinase 9 are implicated in promoting tumor cell growth, invasion, and angiogenesis. xref , xref MDSCs also induce immune suppression by facilitating tolerance in cytotoxic T cells via nitration or nitrosylation of the T cell receptor or secreted nitric oxide, which prevents the natural killer (NK) cell-FcR mediated activity. xref , xref Cytotoxic function by T cells and NK cells are also controlled by T regulatory cells, which can be subverted by tumor cells to elicit pro-tumor responses. xref Tumor cells also use additional strategies to ensure evasion from cells of the innate and adaptive immune system; for example, downregulation of major histocompatibility complex (MHC) molecules, blockade of activating receptors or shedding of NK activating receptor ligands, inducing T cell anergy, and promoting macrophage differentiation into a pro-tumorigenic M2 phenotype. xref , xref , xref "

sparser
"MMP-23 is an MMP that contains N-terminal transmembrane domain type II for anchoring the protein to the cell surface and C-terminal immunoglobulin-like cell adhesion molecule (Ig-CAM) domain ( xref ) to mediate protein–protein and protein–lipid interactions."

sparser
"In this study, we revealed that IgSF11, a member of the Ig-CAM family, engages in homophilic interactions and leads to increased osteoclast differentiation through association with PSD-95."

sparser
"The Ihog family proteins are type I single-span transmembrane proteins with immunoglobulin (Ig) and fibronectin type III (FNIII) domains, resembling typical cell adhesion molecules in the Ig-CAM (Ig cell adhesion molecule) superfamily."

sparser
"Other members of the Ig-CAM family, such as the netrin receptor DCC, the Slit receptor Robo, and neural cell adhesion molecule (N-CAM), have dual roles."
CR affects CALM1
| 53
CALM1 binds CR. 10 / 53
| 53

sparser
"Compared with group R1, the CAM-CR score in group R2 was higher on day 1 after surgery ( P  < 0.05)."

sparser
"The VAS and CAM-CR scores were lower at each postoperative time point in group P than in group C ( p < 0.05)."

sparser
"Compared with group P, the CAM-CR score of group R1 was lower on day 1 and day 7 after surgery ( P  < 0.05)."

sparser
"Daily assessment was based on patient interview with the CAMCR, and delirium was diagnosed by the Delirium Rating Scale (DRS‐R‐98)."

sparser
"Among the 166 patients enrolled, after six POD assessments, a total of 53 patients had a CAM-CR score of more than 22 points, which indicated the presence of POD."

sparser
"In our study, both CAMCR and DRS‐R‐98 scores were used to diagnose perioperative delirium and quantify delirium severity in older hip fracture patients, which provides guidance in our early intervention efforts for preventing and controlling perioperative delirium."

sparser
"4AT, CAM, 3D-CAM, CAM-CR, CAM-ICU, CAM-ICU-7, and Nu-DESC were recommended at a level B. The Cronbach’s coefficient of most studies is over 0.8, and the inter-rater reliability of most studies is near or over 0.9, indicating good internal consistency and stability."

sparser
"In addition, our comprehensive care program provided preoperative psychological counseling to the patients and used CAMCR scores to promptly diagnose delirium."

sparser
"Patients in the conventional orthopedic care program were treated with risperidone when they showed signs of delirium and their CAMCR score was ≥20."

sparser
"Regarding the risk of bias, the overall risk of the seven studies, except for CAM-CR, was relatively low."
Cnn affects CALM1
| 45
| 45

sparser
"Dastbaravardeh et al. xref proposed a lightweight action recognition framework using CNN with Channel Attention Mechanisms (CNN-CAM) and AE to detect human actions in low-resolution and low-size videos."

sparser
"Subsequently, Partial Least Squares (PLS) regression, Convolutional Neural Network (CNN), CNN combined with channel attention mechanism (CNN-CAM), CNN combined with spatial attention mechanism (CNN-SAM), and CNN combined with Convolutional Block Attention Mechanism (CNN-CBAM) models were developed and evaluated for their suitability and stability in predicting wood moisture content."

sparser
"Zhang et al. [ xref ] used 3D densely connected convolutional neural network (CAM-CNN) to extract brain MRI multilevel features for classification of Alzheimer's disease and mild cognitive impairment, densely connected difference at different unit levels; 3D dense unit introduces attention mechanism to generate attention maps and sum transformed MRI hierarchical data into more compact high-level; model has high classification prediction accuracy, and classification performance is at the highest level."

sparser
"We first proposed the densely connected convolution neural network with connection-wise attention mechanism (short for ‘CAM-CNN’) to learn the multi-level features of MR brain images."

sparser
"We proposed a 3D connection-wise-attention-model-based densely connected convolution neural network (CAM-CNN) to learn the multi-level features of brain MR images."

sparser
"The proposed CAM-CNN method presented better performance than the popular networks such as ResNet and DenseNet."

sparser
"The proposed CAM-CNN model achieved the highest accuracy of 97.35%."

sparser
"The area under curve (AUC) of the four networks were all higher than 90%, where AUC of CAM-CNN almost attained 100%."

sparser
"DenseNet and CAM-CNN performed well with accuracy of 87.53% and 87.82% respectively, and the AUC of the two models have exceeded 90%."

sparser
"The proposed CAM-CNN method again showed the highest accuracy of 78.79% for cMCI vs. ncMCI classification, with AUC of 86.79%."
ESP32 affects CALM1
| 43
CALM1 binds ESP32. 10 / 43
| 43

sparser
"The ESP32-CAM can be substituted with a Seeed Studio XIAO camera board, which includes an integrated battery driver so that the lithium-ion battery can instead be connected directly to the board."

sparser
"For an ESPlanktoscope using the ESP32-CAM module, which does not provide enough GPIO pins to control the motor directly, the motor driver must be controlled by a second ESP32 microcontroller board connected to the ESP32 camera module, as the ESP32 camera module does not offer enough GPIO pins to control the motor directly; in such a configuration, the ESP32 camera module sends a PWM signal to the second microcontroller in order to set the flow rate of the pump."

sparser
"To image small particles such as dust particles, we removed the black plastic cap holding the threaded objective lens provided with the ESP32-CAM module’s camera sensor and instead applied the sample droplet directly to a coverslip placed directly on the sensor window."

sparser
"Firmware binaries can be uploaded using either an over-the-air (OTA) mechanism or through the Web Serial-based web page, which provides a selection of customized firmware configurations (e.g. for the ESP32-CAM board, the Seeed Studio Xiao Sense board, Serial Camera, ESPectrophotometer)."

sparser
"This study aims to validate the benefits of using a single-chip microprocessor, specifically the ESP32-CAM, as an edge server."
| PMC

sparser
"For instance, a monitoring system that combines the ESP32-CAM and Raspberry Pi with YOLOv8 has been developed to detect and classify objects, such as humans and animals, in the field [ xref ]."
| PMC

sparser
"By leveraging the ESP32-CAM on the edge and YOLOv8 in the cloud, we propose a system that optimizes both latency and accuracy."
| PMC

sparser
"The specific performance of highly constrained hardware like the ESP32-CAM in edge computing scenarios has not been extensively explored."
| PMC

sparser
"Leveraging the ESP32-CAM’s local processing capabilities while selectively offloading complex tasks to the cloud, the proposed system offers a cost-effective and efficient solution for resource-constrained IoT devices."
| PMC

sparser
"The primary objective of this study is to evaluate the integration of edge computing and cloud processing for real-time object recognition using the ESP32-CAM."
| PMC
CYP affects CALM1
| 41
| 41

sparser
"The authors classified this complex as heme oxy I [33] , which is spectrally similar to oxyferrous cytochrome P450-CAM [36] ."

sparser
"The hydroxyl group of T252 and WAT901 serves as hydrogen bond donors to the distal oxygen atom of the heme iron-bound dioxygen for wild-type P450-CAM ( Fig. 6 ) [1] ."

sparser
"It should be noted, however, that oxyferrous P450-CAM, a heme oxy I-type species, also shows a ferric–superoxide resonance Raman spectral characteristics (ν O–O = 1139–1147 cm −1 ) [38–41] ."

sparser
"Recombinant wild-type and T252A mutant P450-CAM proteins were expressed in Escherichia coli [18,30] and purified as reported [31] and stored at −70 °C at ∼100 μM concentrations in 100 mM potassium pho[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"This is because Mb has a neutral histidine as its proximal ligand, while in ferrous P450-CAM or CPO, the proximal ligands is a negatively charged cysteinate."

sparser
"Thus, we have first studied the binding of the various camphor analogs to ferric P450-CAM, whose spectral changes are generally more sensitive to differences in substrate-binding mode than those of th[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"These spectral features are not seen or are negligible for the camphor- or camphor analog-bound wild-type (even at −40 °C) and T252A mutant (at 4 °C, but seen at −40 °C) enzymes and are likely to be a[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"The MCD spectrum of this species is shown in Fig. 4 A. The spectrum is very similar to that previously reported for low-spin ferric P450-CAM [20] and consists of a moderately intense derivative-shaped[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"To avoid appearance of such a P420-type spectral signal, it is important to prepare substrate-bound P450-CAM samples within 1 h after camphor removal at ∼4 °C. The MCD intensity of the derivative-shap[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"The MCD spectrum of ferrous substrate-bound BMP at −55 °C had a sharp derivative-shaped component centered at 556 nm ( Fig. 4 A) that was likely due to a small amount of six-coordinate ferrous species[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
CALM1 affects calcium(2+)
4 | 27
4 | 14

reach
"It is speculated that the extract could prevent calcium influx, inhibit the calcium-in- duced calcium release mechanism, prevent the release of calcium from the sarcoplasmic reticu- lure or prevent th[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

"Protein interaction studies demonstrated physical association of HDAC4 with SRF in living cells. The SRF/HDAC4 co-association was disrupted by treatment of cells with hypertrophic agonists such as angiotensin-II and a Ca2+ ionophore, ionomycin. Furthermore, activation of Ca2+/calmodulin-dependent protein kinase (CaMK)-IV prevented SRF/HDAC4 interaction and derepressed SRF-dependent transcription activity."

"We report that HDAC4 and MITR contain calmodulin-binding domains that overlap with their MEF2-binding domains. Binding of calmodulin to HDAC4 leads to its dissociation from MEF2, relieving MEF2 from the transcriptional repression by HDAC4. Together, HDAC4, MITR, and Cabin1 constitute a family of calcium-sensitive transcriptional repressors of MEF2."

reach
"A recent NMR structure of CaM bound to a peptide fragment of CaM1 [53] reveals that the Ca -bound CaM N-lobe binds stably to CaM1 (Figure 3B), but the Ca -bound CaM C-lobe binds to CaM1 with much lower affinity, which prevents determination of its structure [53]."

reach
"Ca ^-dependent binding of nitrendipine to calmo- dulin."

reach
"Our binding studies reveal that CaM1 binds to the Ca 2+ -bound CaM N-lobe with at least fivefold higher affinity than it binds to the CaM C-lobe."

reach
"The calcium binding activity of calmodulin, which TABLE I THE EFFECT OF EDTA ON BINDING OF CALCIUM TO CALMODULIN Bound calcium Addition (pmol) Calmodulin 140 Calmodulin + EDTA 15 - 26 EDTA 23 Note."

reach
"The CaM N-lobe is proposed to serve as a Ca sensor that binds to CaM1 to promote channel inactivation only at high Ca levels in dark-adapted rods."

reach
"Peptide fragments of CaM1 (residues 565–589) and CaM2 (residues 1120–1147) were shown previously to bind to Ca -bound CaM, but the binding of CaM1 and CaM2 to Ca -free CaM has not been reported."

reach
"As summarized in Table I, dogfish erythrocyte D245 and mammalian brain a-fodrin are similar in that they ex- hibit comparable electrophoretic mobili- ties, comparable calcium dependent cal- modulin bi[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
CALM1 activates calcium(2+).
| 8
| 8

reach
"In contrast, the EC value of scoparone in oocytes expressing L-VGCC and pretreated with CaM1 (at a K of 0.61 μM) was reduced ~ 10-fold to 0.46 μM (Fig. 4m-n; Table S11), indicating that CaM1 enhanced the Ca channel-activating effect of scoparone."

reach
"The facilitating effect of CaM1 was significantly enhanced (the K value was reduced from 0.61 to 0.28), but the inhibitory effect was significantly decreased (the K value was increased from 8 to 12) (Fig. 4q; Table S12), indicating that activation of CaM1 and L-VGCC by scoparone likely induced excessive activation of Ca signalling pathways by promoting CDF or blocking CDI of L-VGCC."

reach
"Cahalan and Hall [21] have elegantly demonstrated the regulation of MIP water permeability by Ca 2+, which is modulated by CAM."

reach
"Regulation of calcium transport in the CAM is not clearly understood; physical interaction of the CAM with the eggshell and/or shell membranes is needed to stimulate development of a functional calciu[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

reach
"Moreover, a Ca ^-ATPase stimulated by PICA and PKG and CAM dependent protein kinases has been described in a microsomal fraction from canine trachea!"

reach
"Thus, the novel Ca signalling pathways mediated by CaM1 and L-VGCC are critical for the acaricidal mechanism of scoparone.It can be hypothesized that the activation of Ca signalling by scoparone is mediated by targeting and interaction with CaM1 and L-VGCC."

reach
"Meanwhile, calmo- dulin was reported to activate calcium uptake by cardiac SR vesicles [14]."

reach
"To examine if CAM mediates the regulatory effects of calcium on phototransduction, we analyzed light responses of wild-type and cam cells in various extracellular calcium concentrations."
CALM1 inhibits calcium(2+).
| 5
| 5

reach
"As shown in Figure 6, the spontaneous Ca 2+ transients were inhibited by incorporation of GSH-CaM, but not by WT-CaM, while domain zipper, dantrolene had no notable anti-arrhythmogenic effect."

reach
"A second calmodulin mutant, cam2, also inhibits the Ca Z +-dependent K+ current [196]."

reach
"CALM1 after binding to Ca changes conformation, activating or inhibiting Ca channels and PMCA receptors (Boczek et al., 2017)."

reach
"In this regard, the novel splice variant of CaM-2 decreased significantly the peak current density of recombinant Ca V 2.3 channels."

reach
"In another study [20], the CAM antagonists CGS 9343B and calmidazolium were both found to reversibly inhibit Ca 2+ oscillations in rat hepatocytes."
NP affects CALM1
| 36
CALM1 binds NP. 10 / 36
| 36

sparser
"The incidence of treatment-related adverse event (TRAE)-related treatment discontinuation was 13.3% (4/30) in the Cam-NP group and 17.9% (5/28) in the NP group, with no significant difference between the 2 groups ( P  = ."

sparser
"Discontinuations in the Cam-NP group were primarily due to bradycardia, pneumonitis, reactive cutaneous capillary endothelial proliferation (RCCEP), and meningitis."

sparser
"The ORR in the Cam-NP group was 33.3%, which was significantly higher than the control group ( P  = ."

sparser
"Further analysis of patients who underwent at least one computed tomography assessment revealed an ORR of 35.7% in the Cam-NP group, representing a 19.9% improvement over the single-agent cohort, though this did not reach statistical significance ( P  = ."

sparser
"The median progression-free survival (mPFS) was 5.62 months in the Cam-NP group, extending the mPFS of the single-agent chemotherapy group by 1.41 months with statistical significance (HR 0.33, P  = ."

sparser
"Lastly, there was a noticeable upward trend in median overall survival (mOS) in the Cam-NP group, which reached 9.8 months, extending the mOS of the single-agent group by 2.63 months (HR 0.62, P  = 0.087)."

sparser
"Elevated liver aminotransferase levels and skin toxicity were more frequently observed in the Cam-NP group."

sparser
"As a result, AC and PC bound and internalized anti-ICAM NP mainly by the CAM pathway (not clathrin pits or caveoli), yet, at a lower level than EC: by 1 h, AC and PC bound 79 and 95 NP/cell vs 200 NP/cell for EC, and internalized 42 and 43 NP/cell vs 110 NP/cell for EC."

sparser
"This multicenter, randomized phase II trial evaluated the efficacy of nab-paclitaxel plus camrelizumab (Cam-NP) versus nab-paclitaxel alone (NP) in patients with advanced gastric adenocarcinoma resistant to prior treatment."

sparser
"Patients were randomized to receive either Cam-NP or NP until disease progression, intolerable toxicity, or consent withdrawal."
Calcium(2+) affects CALM1
4 2 | 19
4 | 14

reach
"It is speculated that the extract could prevent calcium influx, inhibit the calcium-in- duced calcium release mechanism, prevent the release of calcium from the sarcoplasmic reticu- lure or prevent th[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

"Protein interaction studies demonstrated physical association of HDAC4 with SRF in living cells. The SRF/HDAC4 co-association was disrupted by treatment of cells with hypertrophic agonists such as angiotensin-II and a Ca2+ ionophore, ionomycin. Furthermore, activation of Ca2+/calmodulin-dependent protein kinase (CaMK)-IV prevented SRF/HDAC4 interaction and derepressed SRF-dependent transcription activity."

"We report that HDAC4 and MITR contain calmodulin-binding domains that overlap with their MEF2-binding domains. Binding of calmodulin to HDAC4 leads to its dissociation from MEF2, relieving MEF2 from the transcriptional repression by HDAC4. Together, HDAC4, MITR, and Cabin1 constitute a family of calcium-sensitive transcriptional repressors of MEF2."

reach
"A recent NMR structure of CaM bound to a peptide fragment of CaM1 [53] reveals that the Ca -bound CaM N-lobe binds stably to CaM1 (Figure 3B), but the Ca -bound CaM C-lobe binds to CaM1 with much lower affinity, which prevents determination of its structure [53]."

reach
"Ca ^-dependent binding of nitrendipine to calmo- dulin."

reach
"Our binding studies reveal that CaM1 binds to the Ca 2+ -bound CaM N-lobe with at least fivefold higher affinity than it binds to the CaM C-lobe."

reach
"The calcium binding activity of calmodulin, which TABLE I THE EFFECT OF EDTA ON BINDING OF CALCIUM TO CALMODULIN Bound calcium Addition (pmol) Calmodulin 140 Calmodulin + EDTA 15 - 26 EDTA 23 Note."

reach
"The CaM N-lobe is proposed to serve as a Ca sensor that binds to CaM1 to promote channel inactivation only at high Ca levels in dark-adapted rods."

reach
"Peptide fragments of CaM1 (residues 565–589) and CaM2 (residues 1120–1147) were shown previously to bind to Ca -bound CaM, but the binding of CaM1 and CaM2 to Ca -free CaM has not been reported."

reach
"As summarized in Table I, dogfish erythrocyte D245 and mammalian brain a-fodrin are similar in that they ex- hibit comparable electrophoretic mobili- ties, comparable calcium dependent cal- modulin bi[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
Calcium(2+) activates CALM1.
2 | 5
2 | 5

reach
"An increase in free cytosolic calcium activates Ca2+ and calmodulin dependent CAM kinases and triggers cytoskeletal changes (e.g. polymerization of F-actin)."

"Calmodulin is the best studied and prototypical example of the e-f-hand family of ca2+-sensing proteins. In the event of a transient rise in Ca2+, the Ca2+ ion is coordinated in each Ca2+-binding loop of Ca2+–CaM by seven, primarily carboxylate, ligands. The binding of Ca2+ leads to substantial alterations in the interhelical angles within the E–F hands in each domain and dramatically changes the two domains of CaM to produce more ‘open’ conformations"

reach
"Binding of four calcium ions induces a conformational change in calmod- ulin which can then activate a large number of proteins."

reach
"The results in this research indicated that, 14-3-3 F, CPK17, and ATPase3 were increased by 600 mmol L Ca , and calmodulin 1 was increased by 1200 mmol L Ca also (Table 1, Table 3)."

reach
"This suggests that a calcium wave that reaches the soma and triggers a massive long lasting regenerative calcium release in the nucleus may activate CAM kinase IV and gene transcription in the absence[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

reach
"Cam1 – this family has an N-terminal helical transmembrane (TM) domain fused to a C-terminal CARF domain and is activated by cA , resulting in membrane depolarization (32)."

"Treatment with igf-1 or insulin and dexamethasone mobilizes intracellular calcium, activates the ca2+/calmodulin-dependent phosphatase calcineurin, and induces the nuclear translocation of the transcription factor nf-atc1."
DSG3 affects CALM1
| 30
| 30

sparser
"At the same time, excision wounds treated with uncapped-CAM after the 14 th day showed the presence of a minimal amount of collagen with regeneration and incomplete tissue regeneration, compared with CAM alone, PVA-CAM, PVP-CAM, TSC-CAM or SBD-CAM, as shown in the xref , xref and xref ."

sparser
"Histopathological results suggested that the angiogenic response and re-epithelization potential in PVA-CAM were effectively higher than for uncapped-CAM."

sparser
"The main reason was the presence of surface coating or capping agents in PVA-CAM, which leads to a better healing capacity, an effective angiogenic response and complete fibroblast and collagen regeneration."

sparser
"Of all the optimized formulations being studied in these findings, PVA-CAM possess a predominant antimicrobial potential with an effective wound healing contraction of nearly 69% on the 3 rd day after the wounding process, in contrast with the uncapped-CAM with a value of 20%."

sparser
"Similarly on the 14 th day after excision wound injury, treatment with PVA-CAM showed an equal maximum regeneration of fibroblast and collagen and was significantly more effective and angiogenic compared with CAM alone, uncapped-CAM, PVP-CAM, TSC-CAM or SBD-CAM that showed a moderate amount of collagen and fibroblast regeneration, with scant inflammation during their healing process."

sparser
"There is a consequent increase in the percentage wound contraction for PVA-CAM with a maximum amount of angiogenic response."

sparser
"A possible explanation is as follows: the percentage cumulative release of PVA-CAM is found to be a systematic and controlled release due to their less cytotoxic effects on blood cells, whereas the percentage cumulative release of uncapped-AgNPs is found to have a faster and sudden release profile due to the absence of a capping agent and their high toxicity to blood cells."

sparser
"Therefore, due to the lower toxicological effects, controlled release of silver ions and dominant antimicrobial efficacy against selective microorganism, we conclude that PVA-CAM can be considered a more effective polymer for therapeutic benefits in wound healing applications."

sparser
"These findings indicate that PVA-CAM have a predominant antibacterial activity and accelerate the healing potential of excision wound models in Wistar albino rats by enhancing angiogenesis in the wounded sections and are comparatively more efficient (among polymers) than uncapped-CAM, SBD-CAM or untreated wounds (the control)."

sparser
"The obtained histopathological results show the maximum development of collagen and fibroblast deposition when treated with PVA-CAM and these are relatively higher than for other AgNP formulations."
CYS1 affects CALM1
| 30
| 30

sparser
"To advance the detection of protein sulfhydryl groups, we describe the production of new Rabbit monoclonal antibodies that react with carbamidomethyl-cysteine (CAM-cys), a product of iodoacetamide (IAM) labeling of protein sulfhydryl residues."

sparser
"The monoclonal antibodies label a subset of CAM-cys modified peptide sequences and purified proteins (human von Willebrand Factor (gene:vWF), Jagged 1 (gene:JAG1), Laminin subunit alpha 2 (gene:LAMA2), Thrombospondin-2 (gene:TSP2), and Collagen IV (gene:COL4)) but do not recognize specific proteins such as Bovine serum albumin (gene:BSA) and human Thrombospondin-1 (gene:TSP1), Biglycan (gene:BGN) and Decorin (gene:DCN)."

sparser
"Scanning mutants of the peptide sequence used to generate the CAM-cys antibodies elucidated residues required for context dependent reactivity."

sparser
"Further development of novel CAM-cys monoclonal antibodies in conjunction with other biochemical tools may complement current methods for sulfhydryl detection within specific proteins."

sparser
"Moreover, CAM-cys reactive reagents may be useful when there is a need to label subpopulations of proteins."

sparser
"To enhance the potential for antibodies to bind to reduced protein on immunoblots, a peptide corresponding to this sequence (CFDPKYGEPKRPPNCARGSCPWDSQL; accession # NP_001138585.2) was generated with a reduced N-terminal anchoring cysteine and two CAM-cys residues in place of the remaining native cysteines."

sparser
"Of the antibodies identified by ELISA, we found by dot blotting that two rabbit IgG monoclonals (4E7 and 52H11) bound to the CAM-cys modified MYADML2 peptides but were incapable of binding to peptides lacking CAM-cys modifications (peptide sequences shown in xref ; blots shown in xref [probed with 4E7],1C [with 52H11], and 1D [with secondary antibody alone])."

sparser
"We suspected that these MYADML2 non-reactive clones may, in fact produce, antibodies against CAM-cys that were incorporated in the immunizing peptide."

sparser
"Breadth of proteins detected by CAM-cys monoclonal antibodies."

sparser
"The parameters for the database search were tryptic peptides with one missed cleavage, carbamidomethylation (cys-CAM) as fixed modification, and oxidation (methionine) as variable modification, peptid[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
CALM1 affects DSG3
| 30
| 30

sparser
"At the same time, excision wounds treated with uncapped-CAM after the 14 th day showed the presence of a minimal amount of collagen with regeneration and incomplete tissue regeneration, compared with CAM alone, PVA-CAM, PVP-CAM, TSC-CAM or SBD-CAM, as shown in the xref , xref and xref ."

sparser
"Histopathological results suggested that the angiogenic response and re-epithelization potential in PVA-CAM were effectively higher than for uncapped-CAM."

sparser
"The main reason was the presence of surface coating or capping agents in PVA-CAM, which leads to a better healing capacity, an effective angiogenic response and complete fibroblast and collagen regeneration."

sparser
"Of all the optimized formulations being studied in these findings, PVA-CAM possess a predominant antimicrobial potential with an effective wound healing contraction of nearly 69% on the 3 rd day after the wounding process, in contrast with the uncapped-CAM with a value of 20%."

sparser
"Similarly on the 14 th day after excision wound injury, treatment with PVA-CAM showed an equal maximum regeneration of fibroblast and collagen and was significantly more effective and angiogenic compared with CAM alone, uncapped-CAM, PVP-CAM, TSC-CAM or SBD-CAM that showed a moderate amount of collagen and fibroblast regeneration, with scant inflammation during their healing process."

sparser
"There is a consequent increase in the percentage wound contraction for PVA-CAM with a maximum amount of angiogenic response."

sparser
"A possible explanation is as follows: the percentage cumulative release of PVA-CAM is found to be a systematic and controlled release due to their less cytotoxic effects on blood cells, whereas the percentage cumulative release of uncapped-AgNPs is found to have a faster and sudden release profile due to the absence of a capping agent and their high toxicity to blood cells."

sparser
"Therefore, due to the lower toxicological effects, controlled release of silver ions and dominant antimicrobial efficacy against selective microorganism, we conclude that PVA-CAM can be considered a more effective polymer for therapeutic benefits in wound healing applications."

sparser
"These findings indicate that PVA-CAM have a predominant antibacterial activity and accelerate the healing potential of excision wound models in Wistar albino rats by enhancing angiogenesis in the wounded sections and are comparatively more efficient (among polymers) than uncapped-CAM, SBD-CAM or untreated wounds (the control)."

sparser
"The obtained histopathological results show the maximum development of collagen and fibroblast deposition when treated with PVA-CAM and these are relatively higher than for other AgNP formulations."
CALM1 affects CYS1
| 30
| 30

sparser
"To advance the detection of protein sulfhydryl groups, we describe the production of new Rabbit monoclonal antibodies that react with carbamidomethyl-cysteine (CAM-cys), a product of iodoacetamide (IAM) labeling of protein sulfhydryl residues."

sparser
"The monoclonal antibodies label a subset of CAM-cys modified peptide sequences and purified proteins (human von Willebrand Factor (gene:vWF), Jagged 1 (gene:JAG1), Laminin subunit alpha 2 (gene:LAMA2), Thrombospondin-2 (gene:TSP2), and Collagen IV (gene:COL4)) but do not recognize specific proteins such as Bovine serum albumin (gene:BSA) and human Thrombospondin-1 (gene:TSP1), Biglycan (gene:BGN) and Decorin (gene:DCN)."

sparser
"Scanning mutants of the peptide sequence used to generate the CAM-cys antibodies elucidated residues required for context dependent reactivity."

sparser
"Further development of novel CAM-cys monoclonal antibodies in conjunction with other biochemical tools may complement current methods for sulfhydryl detection within specific proteins."

sparser
"Moreover, CAM-cys reactive reagents may be useful when there is a need to label subpopulations of proteins."

sparser
"To enhance the potential for antibodies to bind to reduced protein on immunoblots, a peptide corresponding to this sequence (CFDPKYGEPKRPPNCARGSCPWDSQL; accession # NP_001138585.2) was generated with a reduced N-terminal anchoring cysteine and two CAM-cys residues in place of the remaining native cysteines."

sparser
"Of the antibodies identified by ELISA, we found by dot blotting that two rabbit IgG monoclonals (4E7 and 52H11) bound to the CAM-cys modified MYADML2 peptides but were incapable of binding to peptides lacking CAM-cys modifications (peptide sequences shown in xref ; blots shown in xref [probed with 4E7],1C [with 52H11], and 1D [with secondary antibody alone])."

sparser
"We suspected that these MYADML2 non-reactive clones may, in fact produce, antibodies against CAM-cys that were incorporated in the immunizing peptide."

sparser
"Breadth of proteins detected by CAM-cys monoclonal antibodies."

sparser
"The parameters for the database search were tryptic peptides with one missed cleavage, carbamidomethylation (cys-CAM) as fixed modification, and oxidation (methionine) as variable modification, peptid[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
Integrins affects CALM1
| 28

sparser
"The CAM-integrin interaction produces a tight adhesion that will finally allow the immobilized leukocyte to transmigrate through the endothelial wall in a process of diapedesis [ 7 ]."

sparser
"These experiences suggest that, at least in IBD, targeting the chemokine-chemokine receptor axis is not as effective as targeting integrin-CAM interactions."

sparser
"Based on these novel integrinCAM interactions, and the novel observation that L1 can be expressed on blood vessels under various pathogenic conditions, we propose that L1 may have an expanded and unexpected role in various vascular and thrombogenic processes."

sparser
"cCAM integrin-binding active sites are given as amino acid motifs; residues also fought to participate in integrin- CAM interactions are shown in brackets. (Ref."

sparser
"Subsequent adhesion and crawling are primarily mediated via the interactions between the members of CAM and β 1 /β 2 integrin families ( xref ), however the specificity of these interactions differs between neutrophils and monocytes ( xref – xref )."

sparser
"Besides well-documented integrinCAM involvement, this process depends first on rearrangement of lymphocyte's cytoskeleton, coordinated by GTPases RAP1 and RhoA and their multiple downstream effectors[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Finally, diapedesis is influenced by HS regarding transendothelial chemokine gradient formation and integrin- CAM interactions, and further enhanced by heparanase-mediated degradation of the endothelial basement membrane."

sparser
"Natalizumab, a monoclonal humanized antibody targeting integrin α4, inhibits the transmigration of lymphocytes into the CNS by preventing the interaction of integrin α4β1 with V-CAM expressed on brain vascular endothelial cells."

sparser
"Prior to integrin-CAM engagement, there is evidence in autoimmune and allograft transplant models that T cells require a cognate antigen signal, presented by MHC class I or MHC class II expressed on EC, to enter tissues ( xref , xref , xref – xref )."

sparser
"This leads to the attraction of B cells to the walls of HEVs, allowing the adhesion of B cells to the endothelium via α4β1 integrins interacting with V-CAM1 ( xref )."
| 26

sparser
"The system of CAMLnA exhibited the largest magnitude of density on all of the temperature values, whereas the CIT–LnA HDES system showed the least values for density and PIP–LnA was the intermediate case among the three systems."

sparser
"For instance, the CAMLnA system has two peaks around the wavenumber of 1750 cm –1 ."

sparser
"The mass drop percentages from the start of the test until reaching the T onset value were ∼5.0% for the CAMLnA system and ∼3.0% in the cases of CIT–LnA and PIP–LnA systems."

sparser
"For example, the CAMLnA system shows two prominent peaks around 1750 cm –1 , which correspond to characteristic stretching vibrations from both CAM and LnA, albeit with shifts in intensity due to the change in concentration."

sparser
"The best HDES system in selectivity performance was CAMLnA at the pressure of 2.5 and 5 bar; however, all systems showed similar selectivity values at a higher pressure than 5 bar."

sparser
"The CAMLnA natural HDES system was the most viscose system among the three HDES systems."

sparser
"These analyses revealed a strong affinity for CO 2 and N 2 molecules to localize around the HBA–HBD regions of the DES, with CAMLnA demonstrating the strongest interactions, followed by CIT–LnA."

sparser
"Based on these findings, CAMLnA DES is the best option for low-pressure-separation condition utilization, particularly in the oxy-fuel method and direct air capture technology."

sparser
"The equilibrium time was 27, 10, and 4 min at 10, 20, and 30 bar pressures, respectively, in the case of CAMLnA HDES."

sparser
"During the initial 100 s, the cumulative sorption values were ∼62%, ∼77%, and ∼90% at the pressures of 10, 20, and 30 bar, correspondingly, for CAMLnA DES, whereas the sorption magnitudes by CIT–LnA during the initial 100 s of the experiment were ∼62%, ∼87%, and ∼92%, respectively, at 10, 20, and 30 bar pressures."
PacS affects CALM1
| 24
| 24

sparser
"Nevertheless, the probability that CAMPACs are extruded through another set of efflux systems of RND family, 37 cannot be excluded with absolute certainty."

sparser
"This requirement explains our finding that the IC 50 values for CAM and CAMPACs measured in S. aureus are smaller than those measured in E. coli ( Table 1 )."

sparser
"This prompted us to examine the activity of CAMPACs against three multi-drug resistant (MDR) MRSA isolates, GRE2272, GRE2372, and GRE2691."

sparser
"37 Moreover, the PA portion(s) may endow CAMPACs with the ability to penetrate the bacterial inner membrane, by utilizing the polyamine uptake system, a group of polyamine carriers which pertain to t[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Except for compound 2 , all the rest CAMPACs of this subgroup competed more efficiently with putrescine and spermidine for the polyamine uptake system, than with spermine."

sparser
"This finding tempted us to assume that CAMPACs are mainly internalized into the cell through the transporter encoded by the pPT104 operon, which constitutes the spermidine-preferential uptake system."

sparser
"40 Nevertheless, the most effective member of CAMPACs in bacteria, compound 4 , was also able to penetrate eukaryotic cells."

sparser
"41 The rescue in growth observed when CAMPACs and exogenous polyamines are simultaneously added in the medium of bacterial culture may arise either due to a competition between them for the polyamin[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"To differentiate between these two possibilities and to confirm that CAMPACs act on their target after entry into the cells, E. coli cells at an A 560 of 0.020 were grown at 37 °C in M9 medium supple[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"In parallel, cells were grown in the absence of CAMPACs (control cultures)."
VGA1 affects CALM1
| 23
| 23

sparser
"Since the pixels extracted by PSPNet lack rich contextual information, SA-FFNet xref introduces VH-CAM and UC-PPM to enhance the contextual information of pixels."

sparser
"In mutant VH-CAM, Val37, Gly44, Leu45 and Trp47 in framework 2 were substituted by Phe37, Glu44, Arg45 and Gly47, respectively."

sparser
"Purification yields of soluble protein from one liter of bacterial culture normalized to an A 550 of 10 were 0.9(±0.1) mg in the VH-W construct, 5(±0.1) mg in VH-CAM, and 8(±0.1) mg in VH-D. All modif[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"To determine the in vitro relative affinity of the isolated VH domains for Vif protein, the amounts of anti-Vif VH, VH-W, VH-CAM and VH-D domains were normalized and analyzed by ELISA."

sparser
"To determine the expression levels of single-domains in the reducing environment of the cytoplasm in mammalian cells, VH, VH-W, VH-CAM and VH-D were expressed in 293T cells and cell lyzates were prepa[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"The data in Figure 4 demonstrate that anti-Vif VH-CAM and VH-D antibody fragments were the most abundant intracellularly among the four single-domains."

sparser
"Figure 5 shows that anti-Vif VH-CAM and anti-Vif VH-D were the most stable, showing the higher steady-state accumulation and increased half-life, compared to VH and VH-W. Moreover, it should be noted [MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"In contrast, the overall steady-state levels of anti-Vif VH and VH-W were much less than VH-CAM and VH-D domains with a relatively short protein half-life of about two hours."

sparser
"These results were consistent with our observations using immunofluorescence microscopy where VH and VH-W consistently exhibited weaker fluorescence intensity than VH-CAM and VH-D, suggesting a lower [MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Therefore, protein accumulation at steady-state correlates significantly with differences in intracellular protein stability of VH-CAM and VH-D. To provide a qualitative and quantitative measure of th[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
CEA affects CALM1
| 22
| 22

sparser
"Furthermore, research has revealed that HCMV encodes UL7 protein, which serves homology to the N-terminal V-like domain of carcinoembryonic antigen-related cell adhesion molecule 1 (CEA-CAM1), a pro-angiogenic factor involved in signal transduction and cellular adhesion."

sparser
"To assess the selectivity of the immunosensing platform and ensure that the change in the current is due to antigen binding and not the settling of proteins on the surface, a test of some compounds that may be in negative controls of real samples was conducted, including bovine serum albumin (BSA), carcinoembryonic antigen (CEA-CAM), prostate-specific antigen (PSA), 20S proteasome, ascorbic acid (AA), glucose, and dopamine."

sparser
"Contaminating cells, for example inhibitory NK cells [ 27 ], γδ T cells [ 28 ], factors such as CEA-related cellular adhesion molecule-1 (CEA-CAM 1) [ 29 ] and cytokines such as TGFβ [ 30 ], have been[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Our scope, once again, is GPI anchored CEAs: CEA-CAM 6 and CEA-CAM 5, which is also known as CD66e ( xref )."

sparser
"CEA-CAM 1 is tumor suppressing through decreasing cell proliferation and metastasis, while CEA-CAM-5 is tumor promoting through inhibiting colon cell differentiation, anoikis and apoptosis ( xref , xref )."

sparser
"CEA-CAM 6 oncogenic activity is due to mediating metastasis and resisting apoptosis."

sparser
"Increasing metastasis is through CEA-CAM 6 signaling induced SRC activity."

sparser
"Carcinoembryonic antigen-related cell adhesion molecule (CEA-CAM)-positive monocytes are associated with inflammation and ILD in SSc patients [ xref , xref , xref , xref ]."

sparser
"This complex translocates to the nucleus and binds to CEA-CAM 6 gene promoter, elevating its expression ( xref )."

sparser
"Interestingly, CEA-CAM 1 is under expressed in CRC, breast cancer, prostate cancer and hepatoma ( xref )."
CDKN1A affects CALM1
| 22
| 22

sparser
"Genomic DNA from CAM-P21 was extracted using the High Pure viral nucleic acid kit (Roche, Mannheim, Germany)."

sparser
"The genomic DNA of phage CAM-P21 was completely sequenced with an Illumina HiSeq 4000 platform using the 2 × 150-bp paired-end strategy."

sparser
"The three phages (CAM-P21, PC10, and STG2) used in this study were listed in Table 1 ."

sparser
"Phage CAM-P21, a member of Siphoviridae family, effective against C. coli, was kindly provided by the Fukuoka City Institute of Health and Environment, Fukuoka."

sparser
"CAM-P21 has a linear double-stranded DNA (dsDNA) genome 12,587 bp long with an average GC content of 31.19%."

sparser
"Genome of CAM-P21 (GenBank accession number MW462221) does not contain any genes associated to antibiotic resistance, toxins, and virulent factors ( Huang et al., 2021 )."

sparser
"No genes related to virulence or resistance were observed according to the genome of CAM-P21, PC10 and STG2."

sparser
"In the case of phage CAM-P21, which is specific to C. coli , C. coli CAN10 cells were harvested from 15 mL of the culture by centrifugation at 6500× g for 5 min at 25 °C and resuspended in 1 mL of BHI[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"To 4.8 mL of the cell suspension, 0.1 mL of 5 × 10 8 PFU/mL phage PC10 suspension and 0.1 mL of EDTA solution were added to attain a final concentration of 0.67 mM (0.025%) according to the concentrat[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"In the case of C. coli, to 4.8 mL of BHI broth containing the bacteria at 3 × 10 4 CFU/mL was mixed with 0.1 mL of phage CAM-P21 (1.5 × 10 8 PFU/mL), and the EDTA solutions (0.025%, 0.05%) to attain M[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
CALM1 affects CEA
| 22
| 22

sparser
"Furthermore, research has revealed that HCMV encodes UL7 protein, which serves homology to the N-terminal V-like domain of carcinoembryonic antigen-related cell adhesion molecule 1 (CEA-CAM1), a pro-angiogenic factor involved in signal transduction and cellular adhesion."

sparser
"To assess the selectivity of the immunosensing platform and ensure that the change in the current is due to antigen binding and not the settling of proteins on the surface, a test of some compounds that may be in negative controls of real samples was conducted, including bovine serum albumin (BSA), carcinoembryonic antigen (CEA-CAM), prostate-specific antigen (PSA), 20S proteasome, ascorbic acid (AA), glucose, and dopamine."

sparser
"Contaminating cells, for example inhibitory NK cells [ 27 ], γδ T cells [ 28 ], factors such as CEA-related cellular adhesion molecule-1 (CEA-CAM 1) [ 29 ] and cytokines such as TGFβ [ 30 ], have been[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Our scope, once again, is GPI anchored CEAs: CEA-CAM 6 and CEA-CAM 5, which is also known as CD66e ( xref )."

sparser
"CEA-CAM 1 is tumor suppressing through decreasing cell proliferation and metastasis, while CEA-CAM-5 is tumor promoting through inhibiting colon cell differentiation, anoikis and apoptosis ( xref , xref )."

sparser
"CEA-CAM 6 oncogenic activity is due to mediating metastasis and resisting apoptosis."

sparser
"Increasing metastasis is through CEA-CAM 6 signaling induced SRC activity."

sparser
"Carcinoembryonic antigen-related cell adhesion molecule (CEA-CAM)-positive monocytes are associated with inflammation and ILD in SSc patients [ xref , xref , xref , xref ]."

sparser
"This complex translocates to the nucleus and binds to CEA-CAM 6 gene promoter, elevating its expression ( xref )."

sparser
"Interestingly, CEA-CAM 1 is under expressed in CRC, breast cancer, prostate cancer and hepatoma ( xref )."
CALM1 affects CDKN1A
| 22
| 22

sparser
"Genomic DNA from CAM-P21 was extracted using the High Pure viral nucleic acid kit (Roche, Mannheim, Germany)."

sparser
"The genomic DNA of phage CAM-P21 was completely sequenced with an Illumina HiSeq 4000 platform using the 2 × 150-bp paired-end strategy."

sparser
"The three phages (CAM-P21, PC10, and STG2) used in this study were listed in Table 1 ."

sparser
"Phage CAM-P21, a member of Siphoviridae family, effective against C. coli, was kindly provided by the Fukuoka City Institute of Health and Environment, Fukuoka."

sparser
"CAM-P21 has a linear double-stranded DNA (dsDNA) genome 12,587 bp long with an average GC content of 31.19%."

sparser
"Genome of CAM-P21 (GenBank accession number MW462221) does not contain any genes associated to antibiotic resistance, toxins, and virulent factors ( Huang et al., 2021 )."

sparser
"No genes related to virulence or resistance were observed according to the genome of CAM-P21, PC10 and STG2."

sparser
"In the case of phage CAM-P21, which is specific to C. coli , C. coli CAN10 cells were harvested from 15 mL of the culture by centrifugation at 6500× g for 5 min at 25 °C and resuspended in 1 mL of BHI[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"To 4.8 mL of the cell suspension, 0.1 mL of 5 × 10 8 PFU/mL phage PC10 suspension and 0.1 mL of EDTA solution were added to attain a final concentration of 0.67 mM (0.025%) according to the concentrat[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"In the case of C. coli, to 4.8 mL of BHI broth containing the bacteria at 3 × 10 4 CFU/mL was mixed with 0.1 mL of phage CAM-P21 (1.5 × 10 8 PFU/mL), and the EDTA solutions (0.025%, 0.05%) to attain M[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
CALM1 affects C1QL1
| 22
| 22

sparser
"These metabolites reflect integrated CAMCRF conditions, enhancing the understanding of underlying metabolic profiles in apparently healthy individuals and may represent promising metabolic indicators of systemic health."

sparser
"These metabolites reflect integrated CAMCRF conditions, enhancing the understanding of underlying metabolic profiles."

sparser
"This longstanding interest is based on the strong association of both CRF and CAM with overall health."

sparser
"The metabolomic profile of each sex and of each group generated according to the CAMCRF profile for both sexes was evaluated."

sparser
"In the present study, we identified significant associations between CAMCRF profiles and seven metabolites: sebacic acid, ornithine, choline, betaine, N,N ‐dimethylglycine, sarcosine, and glucose."

sparser
"Identifying metabolites associated with integrated CAMCRF profiles may help characterize healthy physiological states."

sparser
"In this context, sebacic acid and ornithine merit attention because they characterize groups with distinct CAMCRF profiles based on two PCs, accounting for at least 47.41% of total data variability."

sparser
"CAMCRF profiles were obtained separately by sex using principal components analysis (PCA) of CAM and CRF."

sparser
"Among these, sebacic acid and ornithine emerged as particularly relevant, as they characterize distinct CAMCRF profiles and contributed more substantially to overall data variability."

sparser
"Interestingly, these metabolites, together with sarcosine, which showed marginal significance in females, p  = 0.019, comprise the mitochondrial arm of the choline degradation pathway, suggesting that mitochondrial disturbances may underlie unfavorable CAMCRF profiles."
3 2 | 7 9
CALM1 binds.
2 | 7
2 | 7

sparser
"Specifically, molten pool images from four representative cases (CAM1CAM4), covering both normal and porosity-defect scenarios, were selected for visualization, as shown in xref ."

sparser
"Access to the Cam-CAM database can be requested at."

sparser
"Recently, BEB6, Macaque1, CAM1CAM6, EbpC, EbpA, Henan-IV, BEB6, CM8, CHG16, O, WL17, CD7, CHS9 and CHG3 genotypes have been reported in a few studies conducted on fecal samples collected from camels in China and Algeria [ xref – xref , xref , xref ]."

No evidence text available

No evidence text available

sparser
"Five strains were sensitive to all four antibiotics (S1-S5), 6 strains were resistant to MTZ (MTZ1-MTZ6), 5 strains were resistant to LVFX (LVFX1-LVFX5), 5 strains were resistant to CAM (CAM1-CAM5), 3 strains exhibited dual drug resistance (DR1-DR3), and 6 strains were multidrug resistant (MDR1-MDR6)."

sparser
"Two proteins quantified significantly different (Caveolin-1: CAV and Calmodulin-1:CALM) are shown in Panel B where the ratio of protein expression between the data obtained from the treated cells, as [MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Using data from the “CAM-Cam” project that recruited a community dwelling population, we identified robust and frail participants based on the Rockwood Frailty index."

sparser
"Here we show that the Calmodulin 1 ( CaM1 ) gene, which encodes Ca 2+ -binding protein calmodulin 1, positively regulates leaf senescence in Arabidopsis ."
CALM1 phosphorylates itself.
| 9
CALM1 phosphorylates itself. 9 / 9
| 9

rlimsp
"Thus, MLC-kinase has a regulatory phosphorylation site(s) that is phosphorylated by the autophosphorylated form of CaM-kinase II and is blocked by Ca2+/CaM-binding."

rlimsp
"These observations indicate that the purified JTC contain membrane-bound calmodulin-dependent protein kinase that undergoes autophosphorylation and catalyzes phosphorylation of various membrane proteins."

rlimsp
"Dual role of calmodulin in autophosphorylation of multifunctional CaM kinase may underlie decoding of calcium signals."

rlimsp
"The kinetics of autophosphorylation of the cytoskeletal form of the neuronal calmodulin-dependent protein kinase type II were studied as a function of calmodulin binding under the same conditions."

rlimsp
"These results suggest a plausible model in which autophosphorylation of CaM-kinase II leads to a conformational change in the region of 293Phe-Asn-Ala295 which makes these residues accessible for binding to CaM."

rlimsp
"Along with information from the crystal structure of Ca2+/CaM bound to CKII(290-314) (Meador, W. E., Means, A. R., and Quiocho, F. A. (1993) Science 262, 1718-1721), our results suggest a model in which CaM-dependent autophosphorylation of CaM-kinase induces a conformational change in the region of the CaM-binding domain which allows the formation of additional stabilizing interactions with CaM."

rlimsp
"In contrast, dissociation of CaM from either autophosphorylated CaM-kinase or peptide CKII(290-314) was extremely slow with apparent off-rates of about 3-9 x 10(-5) s-1."

rlimsp
"Autophosphorylation of CaM-kinase II produces a form of the enzyme not requiring Ca(2+)/calmodulin for sustained activity. We report that autophosphorylated CaM-kinase II dephosphorylates itself in the presence of ADP (termed autodephosphorylation). The dephosphorylation was unaffected by phosphatase inhibitors and was nucleotide specific, occurring with ADP but not with AMP, GTP, or GDP. (32)P-ATP was produced when ADP was added to (32)P-labeled CaM-kinase II, indicating that the enzyme was undergoing dephosphorylation through a reversal of the autophosphorylation reaction. ATP addition also produced loss of (32)P from the autophosphorylated enzyme while maintaining the kinase in a phosphorylated state."

rlimsp
"We report that autophosphorylated CaM-kinase II dephosphorylates itself in the presence of ADP (termed autodephosphorylation)."
CALM1 is inactive.
3 |
CALM1 phosphorylated on Y100 is inactive. 3 / 3
3 |

"Phosphorylation of calmodulin by the epidermal-growth-factor-receptor tyrosine kinase. Phosphorylated calmodulin does not exhibit the characteristic ca2+ shift normally observed with calmodulin in electrophoretic gels, an observation that is consistent with this modification affecting the biological activity of the molecule."

"The in vitro phosphorylation of calmodulin by the insulin receptor tyrosine kinase. Phosphorylated calmodulin does not exhibit the characteristic ca2+ shift normally observed with calmodulin in electrophoretic gels, an observation that is consistent with this modification affecting the biological activity of the molecule."

"Phosphorylation of calmodulin by the epidermal-growth-factor-receptor tyrosine kinase. Phosphorylated calmodulin does not exhibit the characteristic ca2+ shift normally observed with calmodulin in electrophoretic gels, an observation that is consistent with this modification affecting the biological activity of the molecule."
CALM1 affects NOS3
6 2 7 | 3 3
CALM1 binds NOS3.
1 7 | 2
1 7 | 2

"Electrons flow from the C-terminal reductase domain of one NOS monomer to the N-terminal oxygenase domain of the other NOS monomer (Siddhanta et al., 1998). The primary mode of enzyme activation is the binding of calcium-bound calmodulin to the N-terminal CaM-binding domain. This facilitates a structure change and the flow of electrons from NADPH through the flavins to the oxygenase domain of the other eNOS monomer"

No evidence text available

No evidence text available

sparser
"We did not observe any interaction between eNOS and CAV1, despite showing a specific and calcium-dependent interaction of eNOS and CALM1 using the same cf expression system."

No evidence text available

No evidence text available

sparser
"Additionally, CR can act on the genes of the upstream pathway, such as IL1B and TNF, which are proinflammatory mediators [ xref , xref ], while ATR can act on downstream genes, such as CALM1 and NOS3, which are associated with learning and memory and anti-inflammatory processes."

No evidence text available

No evidence text available

No evidence text available
CALM1 phosphorylates NOS3.
6 |
CALM1 phosphorylates NOS3 phosphorylated on S1177 on S633. 6 / 6
6 |

No evidence text available

No evidence text available

No evidence text available

No evidence text available

No evidence text available

No evidence text available
CALM1 activates NOS3.
1 | 3 1
CALM1 activates NOS3. 5 / 5
1 | 3 1

sparser
"The anti-aging mechanism of iPSC-sEVs on the BBB is partially attributed to the delivery of AKT1 and CALM, which activates the endothelial eNOS − Sirt1 axis [ xref ]."

reach
"Plus and CAM group were less effective to restore eNOS."

reach
"Fig. 7 E and F showed that KMUP-1 restored p-eNOS at day 28 and KMUP-1S increased p-eNOS at day-7 and at day-28, but Plus and CAM could not restore p-eNOS."

"Electrons flow from the C-terminal reductase domain of one NOS monomer to the N-terminal oxygenase domain of the other NOS monomer (Siddhanta et al., 1998). The primary mode of enzyme activation is the binding of calcium-bound calmodulin to the N-terminal CaM-binding domain. This facilitates a structure change and the flow of electrons from NADPH through the flavins to the oxygenase domain of the other eNOS monomer"

reach
"VEGF stimulates NO production initially by increasing intracellular Ca 2 + levels and subsequent Ca 2 + -calmodulin dependent activation of eNOS, and later by increasing intracellular eNOS message and[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
UMOD affects CALM1
| 20
| 20

sparser
"The selective expression of CXCL10 , CXCL11 , and IL1-β by THP-CAM validates their use as a model for CAM."

sparser
"Upon stimulation with LPS, THP-CAM preferentially expressed IFN-β and IFN-λ1, MyD88, STAT1 and the ISGs: IFIT1, Mx1, CXCL10, OAS1 and ISG15."

sparser
"Unlike the primary human macrophages, however, THP-CAM did not express IFN-α1, the lowest affinity IFN-α subtype."

sparser
"Since IFN-α1 is expressed by primary macrophages in response to synthetic ligands and virulent Mycobacterium tuberculosis (MTB), THP-CAM may provide an opportunity to explore the function of this uniq[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"As shown in Fig. 1 B, THP-CAM and -AAM are adherent with typical flat, elongated and branching macrophage morphology."

sparser
"To validate the THP-CAM and -AAM experimental models, we measured the expression of a representative set of pro- and anti-inflammatory genes using qRT-PCR."

sparser
"After polarization ( Fig. 2 A), THP-CAM preferentially expressed pro-inflammatory genes encoding CXCL10 and CXCL11 , whereas THP-AAM preferentially expressed anti-inflammatory genes encoding the manno[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"After stimulating the polarized cells with LPS ( Fig. 2 B), THP-CAM preferentially secreted IFN-γ and IL-1β, whereas THP-AAM preferentially secreted IL-10 and IL-4 into the supernatant."

sparser
"Indeed, Fig. 3 shows that while STAT6 is expressed equally in both THP-CAM and -AAM, it is only activated in THP-AAM."

sparser
"Having demonstrated that THP-1 monocytes can be polarized to express CAM- or AAM-oriented markers, we used the THP-CAM and -AAM models to investigate differential expression of a panel of 84 IFN α/β p[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
TNS3 affects CALM1
| 20
| 20

sparser
"No CAM-S-CAM-TPP or S(CAM-TPP) 2 was formed without Trx1 or Na 2 S 2 (Fig.  xref )."

sparser
"This anticipated increase in H 2 S was confirmed by trapping it as the diagnostic product S(CAM-TPP) 2 ."

sparser
"On the contrary, the longer linker in the CAM-C14-TPP structure results in the inability of this compound to fit snugly in the space between the optimally bound CAM and TPP fragments."

sparser
"Using procedure B to assess RS(S) n S – under these conditions showed minimal S(CAM-TPP) 2 formation, except when there was excess Na 2 S, consistent with its reaction with existing persulfides (Supplementary Fig.  xref )."

sparser
"Here, we tested the abovementioned CAM-TPP derivatives on chemoresistant triple negative breast cancer (TNBC) cell models, as well as on corresponding CSC-like spheroid cells."

sparser
"In the current work, we studied the effect of CAM-TPP derivatives on CSC-like TNBC cell models."

sparser
"The preliminary results with CAM-C10-TPP showed that normal human fibroblasts were less affected by submicromolar concentrations of CAM-TPP derivatives than cancer cells ( xref )."

sparser
"This trapping procedure will also convert H 2 S into S(CAM-TPP) 2 ."

sparser
"Thus, procedure A generates two products tagged with TPP for MS detection: CAM-S-CAM-TPP from the terminal S atom in RSS – and RS(S) n S – and S(CAM-TPP) 2 from H 2 S (Fig.  xref )."

sparser
"Subsequent reduction with TCEP alongside trapping with excess IAM-TPP generates CAM-S-CAM-TPP from the terminal sulfur atom of RS(S) n S – and S(CAM-TPP) 2 from all the internal sulfane sulfur atoms RS(S) n S – (Fig.  xref , Supplementary Fig.  xref )."
IQ affects CALM1
| 3 17
| 3 17

reach
"Indeed, electrophysiological experiments confirmed these results, showing that scoparone did not promote CDF or block CDI in L-VGCC mutants (in which the combination of two key positions, Ile and Gln, in the IQ motif was replaced with Ala) because CaM1 binding to the IQ region of the Ca channel was impaired.Notably, it has been reported that CaM binds to the N-termini of Ca channels [36], which was confirmed in this study."

sparser
"These results demonstrated that scoparone blocked CDI or promoted CDF of L-VGCC mediated by CaM by strengthening the CaM1-IQ interaction."

sparser
"The fission yeast Class I myosin, Myo1 contains an IQ motif neck region which binds Cam1 [ xref , xref ]."

sparser
"There is little evidence supporting this scenario, but the discovery that scoparone facilitates CaM1 binding to the IQ motif is consistent with this hypothesis."

sparser
"Although CaM1 bound to a well-characterized IQ motif, mutations of the IQ motif that markedly weakened CaM1 binding blocked CDF and heightened CDI of Ca 2+ channels during a single depolarizing pulse, suggesting that CaM interactions with the IQ motif actively suppressed inactivation or promoted facilitation of Ca 2+ channels."

sparser
"Indeed, electrophysiological experiments confirmed these results, showing that scoparone did not promote CDF or block CDI in L-VGCC mutants (in which the combination of two key positions, Ile and Gln, in the IQ motif was replaced with Ala) because CaM1 binding to the IQ region of the Ca 2+ channel was impaired."

sparser
"The interaction of Cam1 with the IQ motifs of Myo1 is tightly controlled by cellular calcium concentrations, when local or whole cell calcium concentrations rise, Cam1 dissociates from Myo1 [ xref , xref ]."

sparser
"Both unmodified and acetylated Cam1 bound to the two Myo1 IQ motifs (comparable amplitudes and 2 rates consistent with cooperative binding to the 2 IQ motifs – Fig.  xref )."

sparser
"Thus, we hypothesized that yeast Cam1 may interact with the HsMyo1e IQ domain."

sparser
"This recruitment was specific for the IQ motif-Cam1 interaction as cells overexpressing mGFP-HsMyo1e tail produced no such effect ( xref )."
CALM1 affects UMOD
| 20
| 20

sparser
"The selective expression of CXCL10 , CXCL11 , and IL1-β by THP-CAM validates their use as a model for CAM."

sparser
"Upon stimulation with LPS, THP-CAM preferentially expressed IFN-β and IFN-λ1, MyD88, STAT1 and the ISGs: IFIT1, Mx1, CXCL10, OAS1 and ISG15."

sparser
"Unlike the primary human macrophages, however, THP-CAM did not express IFN-α1, the lowest affinity IFN-α subtype."

sparser
"Since IFN-α1 is expressed by primary macrophages in response to synthetic ligands and virulent Mycobacterium tuberculosis (MTB), THP-CAM may provide an opportunity to explore the function of this uniq[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"As shown in Fig. 1 B, THP-CAM and -AAM are adherent with typical flat, elongated and branching macrophage morphology."

sparser
"To validate the THP-CAM and -AAM experimental models, we measured the expression of a representative set of pro- and anti-inflammatory genes using qRT-PCR."

sparser
"After polarization ( Fig. 2 A), THP-CAM preferentially expressed pro-inflammatory genes encoding CXCL10 and CXCL11 , whereas THP-AAM preferentially expressed anti-inflammatory genes encoding the manno[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"After stimulating the polarized cells with LPS ( Fig. 2 B), THP-CAM preferentially secreted IFN-γ and IL-1β, whereas THP-AAM preferentially secreted IL-10 and IL-4 into the supernatant."

sparser
"Indeed, Fig. 3 shows that while STAT6 is expressed equally in both THP-CAM and -AAM, it is only activated in THP-AAM."

sparser
"Having demonstrated that THP-1 monocytes can be polarized to express CAM- or AAM-oriented markers, we used the THP-CAM and -AAM models to investigate differential expression of a panel of 84 IFN α/β p[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
CALM1 affects TNS3
| 20
| 20

sparser
"No CAM-S-CAM-TPP or S(CAM-TPP) 2 was formed without Trx1 or Na 2 S 2 (Fig.  xref )."

sparser
"This anticipated increase in H 2 S was confirmed by trapping it as the diagnostic product S(CAM-TPP) 2 ."

sparser
"On the contrary, the longer linker in the CAM-C14-TPP structure results in the inability of this compound to fit snugly in the space between the optimally bound CAM and TPP fragments."

sparser
"Using procedure B to assess RS(S) n S – under these conditions showed minimal S(CAM-TPP) 2 formation, except when there was excess Na 2 S, consistent with its reaction with existing persulfides (Supplementary Fig.  xref )."

sparser
"Here, we tested the abovementioned CAM-TPP derivatives on chemoresistant triple negative breast cancer (TNBC) cell models, as well as on corresponding CSC-like spheroid cells."

sparser
"In the current work, we studied the effect of CAM-TPP derivatives on CSC-like TNBC cell models."

sparser
"The preliminary results with CAM-C10-TPP showed that normal human fibroblasts were less affected by submicromolar concentrations of CAM-TPP derivatives than cancer cells ( xref )."

sparser
"This trapping procedure will also convert H 2 S into S(CAM-TPP) 2 ."

sparser
"Thus, procedure A generates two products tagged with TPP for MS detection: CAM-S-CAM-TPP from the terminal S atom in RSS – and RS(S) n S – and S(CAM-TPP) 2 from H 2 S (Fig.  xref )."

sparser
"Subsequent reduction with TCEP alongside trapping with excess IAM-TPP generates CAM-S-CAM-TPP from the terminal sulfur atom of RS(S) n S – and S(CAM-TPP) 2 from all the internal sulfane sulfur atoms RS(S) n S – (Fig.  xref , Supplementary Fig.  xref )."
CALM1 affects IQ
| 3 17
| 3 17

reach
"Indeed, electrophysiological experiments confirmed these results, showing that scoparone did not promote CDF or block CDI in L-VGCC mutants (in which the combination of two key positions, Ile and Gln, in the IQ motif was replaced with Ala) because CaM1 binding to the IQ region of the Ca channel was impaired.Notably, it has been reported that CaM binds to the N-termini of Ca channels [36], which was confirmed in this study."

sparser
"These results demonstrated that scoparone blocked CDI or promoted CDF of L-VGCC mediated by CaM by strengthening the CaM1-IQ interaction."

sparser
"The fission yeast Class I myosin, Myo1 contains an IQ motif neck region which binds Cam1 [ xref , xref ]."

sparser
"There is little evidence supporting this scenario, but the discovery that scoparone facilitates CaM1 binding to the IQ motif is consistent with this hypothesis."

sparser
"Although CaM1 bound to a well-characterized IQ motif, mutations of the IQ motif that markedly weakened CaM1 binding blocked CDF and heightened CDI of Ca 2+ channels during a single depolarizing pulse, suggesting that CaM interactions with the IQ motif actively suppressed inactivation or promoted facilitation of Ca 2+ channels."

sparser
"Indeed, electrophysiological experiments confirmed these results, showing that scoparone did not promote CDF or block CDI in L-VGCC mutants (in which the combination of two key positions, Ile and Gln, in the IQ motif was replaced with Ala) because CaM1 binding to the IQ region of the Ca 2+ channel was impaired."

sparser
"The interaction of Cam1 with the IQ motifs of Myo1 is tightly controlled by cellular calcium concentrations, when local or whole cell calcium concentrations rise, Cam1 dissociates from Myo1 [ xref , xref ]."

sparser
"Both unmodified and acetylated Cam1 bound to the two Myo1 IQ motifs (comparable amplitudes and 2 rates consistent with cooperative binding to the 2 IQ motifs – Fig.  xref )."

sparser
"Thus, we hypothesized that yeast Cam1 may interact with the HsMyo1e IQ domain."

sparser
"This recruitment was specific for the IQ motif-Cam1 interaction as cells overexpressing mGFP-HsMyo1e tail produced no such effect ( xref )."
CALM1 affects HRAS
20 |
CALM1 is a GEF for HRAS. 10 / 20
20 |

No evidence text available

No evidence text available

No evidence text available

No evidence text available

No evidence text available

No evidence text available

No evidence text available

No evidence text available

No evidence text available

No evidence text available
NINL affects CALM1
| 19
| 19

sparser
"Artificial intelligence-based NLP-CAM algorithm, compared to conventional methods, improved delirium detection from electronic health records and holds promise in delirium diagnostics."

sparser
"The agreements between ICD, flowsheet, and CAM-NLP are provided in xref ."

sparser
"Pagali et al. xref found that their NLP-CAM algorithm achieved 80% sensitivity compared to 55% for ICD codes and 43% for nursing flowsheets."

sparser
"We applied NLP-CAM to three test sites (UTH, University of Alabama at Birmingham (UAB), and Vanderbilt University Medical Center (VUMC)) and reported the out-of-the-box performance, as shown in Table  xref ."

sparser
"This study aims to assess the effectiveness of natural language processing-confusion assessment method (NLP-CAM) algorithm when compared to conventional modalities of delirium detection."

sparser
"A multicenter retrospective study analyzed 4351 COVID-19 hospitalized patient records to identify delirium occurrence utilizing three different delirium detection modalities namely clinician diagnosis, nursing documentation, and the NLP-CAM algorithm."

sparser
"NLP-CAM captured 80% of overall delirium, followed by clinician diagnosis at 55%, and nursing flowsheet documentation at 43%."

sparser
"NLP-CAM is an NLP-powered computational phenotyping tool that can identify a patient’s delirium status from the EHR [ xref ]."

sparser
"Agreement between ICD and CAM-NLP was moderate-high (k = 0.61)."

sparser
"Similarly, agreement between CAM-NLP and flowsheet was moderate (k = 0.42)."
RYR2 affects CALM1
2 | 3 13
2 | 3 13

No evidence text available

sparser
"CAM is constitutively associated with the RYR2 either as apoCAM at low Ca 2+ (<100 nM) or as CaCAM at higher Ca 2+ (∼1 μM) [80,116,136] ."

sparser
"These six LR interactions, namely APOE-SORL1, APOE-LRP1, CALM1-CACNA1C, CALM1-RYR2, CALM3-CACNA1C, and CALM3-RYR2 (Fig.  xref c, d), consistently exhibited downregulation patterns in AD in comparative intercellular communication analysis."

sparser
"CALM1 encodes a regulatory protein of RYR2 and is responsible for inhibiting Ca 2+ release from RYR2 in the sarcoplasmic reticulum to maintain a normal contraction‐relaxation cycle. xref Oxidative stress impairs binding of CALM1 to RYR2 , causing aberrant Ca 2+ release, resulting in cardiac hypertrophy and HF in murine and canine models. xref , xref Our results suggest that estradiol treatment led to tighter control of cardiac Ca 2+ physiology and improved diastolic relaxation."

sparser
"Of these, six LR interactions were highlighted by both analyses, including APOE-SORL1 , APOE-LRP1, CALM1-CACNA1C, CALM1-RYR2, CALM3-CACNA1C, CALM3-RYR2 ( xref ). xref illustrates that the LR pair APOE-SORL1 was downregulated in astrocytes-to-neurons and in microglia-to-neurons signaling."

sparser
"The same group performed functional experiments expressing the mutant protein on a cellular model and found a defective interaction of CALM1 with RYR2 at low calcium concentrations."

sparser
"The interactions between CALM1 and RYR2 hub genes were revealed using a cutoff of 21% alteration."

sparser
"Inhibition of [3H]-ryanodine binding by CAM was phosphorylation-independent, had an IC50 of approximately 0.1 microM and was optimal at 10 microM Ca(2+)."

No evidence text available

reach
"RYR2 is a receptor to CALM1, and the binding of CALM1 to RYR2 has been shown to limit neuronal loss in AD [58]."
EGFR affects CALM1
2 7 5 1 | 3
EGFR binds CALM1.
7 1 | 3
7 1 | 3

No evidence text available

No evidence text available

No evidence text available

No evidence text available

No evidence text available

sparser
"Huang et al. [ xref ] obtained the first experimental evidence for CALM binding to the EGFR in a Ca 2+ -dependent manner in rat liver."

No evidence text available

No evidence text available

No evidence text available

sparser
"Over-expressed CALM1 and EGFR were significantly associated with clinical stage, T classification and poor overall prognosis, respectively."
EGFR phosphorylates CALM1.
2 4 1 |
EGFR phosphorylates CALM1 on Y100. 7 / 7
2 4 1 |

No evidence text available

No evidence text available

"Phosphorylation of calmodulin by the epidermal-growth-factor-receptor tyrosine kinase. Phosphorylated calmodulin does not exhibit the characteristic ca2+ shift normally observed with calmodulin in electrophoretic gels, an observation that is consistent with this modification affecting the biological activity of the molecule."

No evidence text available

No evidence text available

No evidence text available

"Phosphorylation of calmodulin by the epidermal-growth-factor-receptor tyrosine kinase. Phosphorylated calmodulin does not exhibit the characteristic ca2+ shift normally observed with calmodulin in electrophoretic gels, an observation that is consistent with this modification affecting the biological activity of the molecule."
| 1 17

reach
"Treatment with CAM for 5 h resulted in an 8-fold increase of newly radiolabelled PtdSer in the medium.We also examined the synthesis of other phospholipids during CAM induced apoptosis."

reach
"Thus, our data indicated that during CAM induced apoptosis in U937 cells, PtdSer synthesis was stimulated and newly synthesized PtdSer was transferred preferentially to CFMV.Caspases are key ' executi[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

reach
"The mechanisms by which CAM induces apoptosis and exerts its well known anti-cancer effects in tumour cells are not fully elucidated."

reach
"On the basis of this, it might be hypothesised that 1alpha,25 (OH) 2 D 3 suppresses CAM induced apoptosis by inhibiting cell proliferation, which then reduces the number of the dividing cells and thus[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

reach
"PtdEtn formation through PtdSer decarboxylation showed little change in apoptotic cells induced by UV irradiation or TNF-alpha and CHX similar to the CAM induced apoptosis, but [3 H] serine derived Pt[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

reach
"Thus, we could show that T cells are relatively resistant to CAM induced apoptosis compared to other peripheral blood mononuclear cells and that both double negative and single positive thymocytes are[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

reach
"Thus, approximately 28% of CAM induced cells demonstrated apoptosis at 6 h in FCM as compared to 10% in the non induced cells."

reach
"Identification of cells undergoing apoptosis in human PBMNC treated with CAM."

eidos
"CaM inhibitors ( CaMi ) and several kinases facilitate Ser-181 phosphorylation , thus promoting apoptosis ."

reach
"Knocking-down CALM1 by CRIPR-Cas9 and inhibiting EGFR activation with Afatinib in these tumor cells synergistically inhibited cell proliferation, migration and invasion in vitro and in vivo and also i[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
CALM1 affects RYR2
2 | 3 13
2 | 3 13

No evidence text available

sparser
"CAM is constitutively associated with the RYR2 either as apoCAM at low Ca 2+ (<100 nM) or as CaCAM at higher Ca 2+ (∼1 μM) [80,116,136] ."

sparser
"These six LR interactions, namely APOE-SORL1, APOE-LRP1, CALM1-CACNA1C, CALM1-RYR2, CALM3-CACNA1C, and CALM3-RYR2 (Fig.  xref c, d), consistently exhibited downregulation patterns in AD in comparative intercellular communication analysis."

sparser
"CALM1 encodes a regulatory protein of RYR2 and is responsible for inhibiting Ca 2+ release from RYR2 in the sarcoplasmic reticulum to maintain a normal contraction‐relaxation cycle. xref Oxidative stress impairs binding of CALM1 to RYR2 , causing aberrant Ca 2+ release, resulting in cardiac hypertrophy and HF in murine and canine models. xref , xref Our results suggest that estradiol treatment led to tighter control of cardiac Ca 2+ physiology and improved diastolic relaxation."

sparser
"Of these, six LR interactions were highlighted by both analyses, including APOE-SORL1 , APOE-LRP1, CALM1-CACNA1C, CALM1-RYR2, CALM3-CACNA1C, CALM3-RYR2 ( xref ). xref illustrates that the LR pair APOE-SORL1 was downregulated in astrocytes-to-neurons and in microglia-to-neurons signaling."

sparser
"The same group performed functional experiments expressing the mutant protein on a cellular model and found a defective interaction of CALM1 with RYR2 at low calcium concentrations."

sparser
"The interactions between CALM1 and RYR2 hub genes were revealed using a cutoff of 21% alteration."

sparser
"Inhibition of [3H]-ryanodine binding by CAM was phosphorylation-independent, had an IC50 of approximately 0.1 microM and was optimal at 10 microM Ca(2+)."

No evidence text available

reach
"RYR2 is a receptor to CALM1, and the binding of CALM1 to RYR2 has been shown to limit neuronal loss in AD [58]."
CALM1 affects PDE
| 17 1
CALM1 activates PDE.
| 10 1
CALM1 activates PDE. 10 / 11
| 10 1

reach
"Cal- modulin when complexed with the drug is unable to activate phosphodiesterase or several other calmodulin dependent systems such as erythrocyte calcium activated ATPase [7]."

reach
"A CAM assay based on the ability of CAM to stimulate PDE was used [21]."

reach
"This conclusion is based on the fact that interference with CAM expression via an antisense approach resulted in (i) negligible steady state levels of cam RNA expression; (ii) highly reduced CAM prote[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"In this study, the EC 50 of scoparone for PDE activation by CaM1 was 4.92 μM, suggesting that scoparone could indirectly activate the CaM1 protein in vitro ( xref a-c)."

reach
"After cultivation for 3 d at 27 °C, CaM1-expressing Sf9 cells were collected and further resuspended to measure the specific activation of PDE by CaM1."

reach
"Effect of various concentrations of CaCk on the ability of cetiedil to inhibit calmodulin stimulated phospho- diesterase activity Calmodulin- stimulated phosphodiesterase activity Cetiedil CaCli [nmol[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

reach
"As mentioned above, calmo- dulin activates a cytosolic phosphodiesterase which displays a low-A " ", value (micromolar) for cyclic GMP."

reach
"In this study, the EC of scoparone for PDE activation by CaM1 was 4.92 μM, suggesting that scoparone could indirectly activate the CaM1 protein in vitro (Fig. 4a-c)."

reach
"Additionally, the CaM1 assay showed that compared with the control treatment, treatment with the LC , LC , and LC doses of scoparone for 48 h markedly increased the specific activation of PDE by extracted CaM in vivo (by 3.67-, 2.79-, and 1.87-fold, respectively), further demonstrating that scoparone is an agonist of CaM1 (Fig. 4d)."

reach
"CaM- modulated PDE, however, did not appear to be the target for the effects of CaM inhibitors on GVBD, since concentrations of W7 that inhibited maturation did not inhibit cAMP hydrolysis in the oocy[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
CALM1 inhibits PDE.
| 7
CALM1 inhibits PDE. 7 / 7
| 7

reach
"The actions of neuroleptic agents on inhibition of calmodulin- activated phosphodiesterase offer exciting new possibilities with regard to understanding the molecular substrates of psychosis."

reach
"Moreover, the sulphoxide analogue of prochlorperazine, which is also less potent in inhibiting calmodulin- activated phosphodiesterase (unpublished) was also ineffective in inhibiting prolactin secret[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

reach
"Table 1 shows that inhibition of CAM stimulated PDE activity occurred with levels reduced by 52 and 72%, respectively, for AS-1 and AS-2."

reach
"Because caM antagonists W-7 and W-13 inhibit PDE activity (IC 50 = 28 mM and 68 mM, respectively), W-7 and W-13 may block IR enhancement of DSB rejoining fidelity by inhibiting Ca 2+ / caM dependent p[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

reach
"* Unit - one unit is defined as 196 inhibition of calmodulin- stimulated phosphodiesterase activity."

reach
"The effects of cal- modulin and various phospholipids were tested on the activity of a partially purified phosphodiesterase which had been deactivated by the removal of cal- modulin."

reach
"This latter value is similar to the dose required for half- maximal effects of trifluoperazine on inhibition of calmodulin- activated phosphodiesterase [20) and on binding to calmodulin [15]."
NAChRbeta2 affects CALM1
| 17

sparser
"At the same time, excision wounds treated with uncapped-CAM after the 14 th day showed the presence of a minimal amount of collagen with regeneration and incomplete tissue regeneration, compared with CAM alone, PVA-CAM, PVP-CAM, TSC-CAM or SBD-CAM, as shown in the xref , xref and xref ."

sparser
"From xref , it is proven that the percentage wound contraction for uncapped-CAM was significantly lower than the values for SBD-CAM, TSC-CAM, PVP-CAM and PVA-CAM on all the respective (3 rd , 6 th , 9 th , 14 th and 20 th ) days, which may be due to the absence of surface coating or capping agents in the uncapped-CAM, which are responsible for nanoparticle stability and healing potential."

sparser
"As shown in xref , wounds treated with PVA-CAM showed a greater percentage wound contraction compared to PVP-CAM, TSC-CAM, SBD-CAM, uncapped-CAM, CAM alone or the control group."

sparser
"From the results of xref , on the 3 rd day, the percentage wound contraction for PVA-CAM, PVP-CAM, TSC-CAM, SBD-CAM, uncapped-CAM, CAM alone and the control group was found to be 69.25%, 65.5%, 34.25%, 32.75%, 20.25%, 29.5% and 18.25%, respectively."

sparser
"Similarly, on the 6 th day, the percentage wound contraction for PVA-CAM, PVP-CAM, TSC-CAM, SBD-CAM, uncapped-CAM, CAM alone and the control group was found to be 81.75%, 78.5%, 44.25%, 37.75%, 31.5%, 35% and 28.25%, respectively."

sparser
"Histopathological analyses of the excision wound models in the control group (without treatment), CAM alone, uncapped-CAM, SBD-CAM, TSC-CAM, PVP-CAM and PVA-CAM on the 9 th and 14 th day after the excision wound injury are depicted using H & E and MT staining in xref , xref and xref ."

sparser
"On the 9 th day, the percentage wound contraction for PVA-CAM, PVP-CAM, TSC-CAM, SBD-CAM, uncapped-CAM, CAM alone and the control group was found to be 95.25%, 90%, 85.25%, 77%, 60.75%, 64% and 55.25%, respectively."

sparser
"Histopathological studies on treatment with PVA-CAM in the excision wound model showed a maximum amount of fibroblast presence and collagen regeneration after the 9 th day of the healing process, which was found to be comparatively more effective than CAM alone, uncapped-CAM, PVP-CAM, TSC-CAM or SBD-CAM that showed a minimal amount of fibroblast and collagen regeneration, with the presence of dense inflammation."

sparser
"These findings indicate that PVA-CAM have a predominant antibacterial activity and accelerate the healing potential of excision wound models in Wistar albino rats by enhancing angiogenesis in the wounded sections and are comparatively more efficient (among polymers) than uncapped-CAM, SBD-CAM or untreated wounds (the control)."

sparser
"On the 14 th day, the percentage wound contraction for PVA-CAM, PVP-CAM, TSC-CAM, SBD-CAM, uncapped-CAM, CAM alone and the control group was found to be 99.5%, 95%, 88.5%, 84.5%, 70.75%, 72% and 68.75%, respectively."
TFS1 affects CALM1
| 17
| 17

sparser
"These rescued recombinant MVs were designated IC-CAM H, IC-AIK-H, and IC-Tanabe H respectively ( Fig. 2 A )."

sparser
"IC-CAM H, however, exhibited slower and less efficient growth than both IC-AIK H and IC-Tanabe H ( Fig. 2 B)."

sparser
"IC-AIK H and IC-Tanabe H induced syncytia in both HeLa cells (data not shown) and NHDF as outlined in Fig. 2 C. However, the induction of syncytia by IC-CAM H was much less extensive in HeLa cells (da[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Accordingly, growth of IC-CAM H was significantly reduced in CD46-expressing HeLa cells and NHDF, and was slightly slower than that of IC323, IC-AIK H, and IC-Tanabe H in SLAM-expressing B95a cells."

sparser
"IC-CAM H was found to grow in PHA-stimulated PBL to a similar degree as the other recombinant MVs studied, although the growth kinetics was slightly slower."

sparser
"In marmoset B-lymphoid B95a cells, where SLAM is available for MV but not CD46 [48,49] , all of the recombinant MVs examined grew efficiently; however, the growth kinetics of IC-CAM H was always sligh[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"IC-CAM H did not grow efficiently in Mo-DC, even though both PHA-stimulated PBL and Mo-DC express CD46 and SLAM [50,51,53] ."

sparser
"Although syncytia formation was observed in all recombinant MV-infected B95a cells, the spreading of syncytium was always slightly slower in the IC-CAM H-infected cells when compared to that in the ce[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"In addition, growth of IC-CAM H was more reduced in CD46-expressing cells compared to SLAM-expressing cells, a result consistent with those described above, indicating that the ability of the CAM-70 H[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Thus in PHA-stimulated PBL, the CD46-dependent entry of IC-CAM H is likely to be much less efficient but the SLAM-dependent entry likely to be only slightly impaired."
GAD1 affects CALM1
1 | 15 1
1 | 15 1

No evidence text available

reach
"In summary, in the Gad1CaM1 complex, one CaM1 molecule attaches to two Gad1–CaMBDs of neighbouring subunits in a homohexameric enzyme, activating two adjacent active sites by relief of the correspond[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

reach
"This suggests that the two adjacent Lys residues are able to rescue each other's function when one of the two is mutated to Ala.In summary, K496 and K497 fulfil a role in modulating the equilibrium be[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

reach
"In the Gad1CaM1 complex, the 415 nm-absorbing ketoenamine species is present over the entire pH range: CaM1, wrapped around two CaMBDs, keeps two AIDs away from the respective active sites."

sparser
"CaM3 interacts with CRLK1 (calcium/calmodulin-regulated receptor-like kinase 1) and AGL24 (MADS box protein) whereas CaM1 interacts with GAD (glutamate decarboxylase 1), LP1 (lipid transfer protein), AK1 (aspartokinase) and HY5 (basic leucine zipper) protein ( xref ) [ xref , xref ]."

reach
"56 Synchrotron X-ray scattering data from solutions of Gad1 and from the Gad1CaM1 complex were collected at the X33 beamline (DESY, Hamburg) using a MAR345 image plate detector."

reach
"64 The ab initio reconstructions were done with P 3 symmetry of hexameric Gad1 and of its complex with CaM1 introduced as a rigid constraint as well as without symmetry restrictions.The program BUNCH [MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

reach
"68 The conformational space of Gad1CaM1 complex was explored using the EOM approach, which takes flexibility into account by allowing for the coexistence of multiple conformations in solution."

reach
"Representative models of the Gad1CaM1 complex were taken from the multiple rigid body modelling runs to yield an initial pool of models."

reach
"14 In contrast to that result, the NMR structure by Yap and co-workers, containing Gad CaMBD peptides bound to CaM, indicated a 1:2 complex, corresponding to a 1:3 stoichiometry for the Gad1CaM1 comp[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
CALM1 affects nAChRbeta2
| 17

sparser
"At the same time, excision wounds treated with uncapped-CAM after the 14 th day showed the presence of a minimal amount of collagen with regeneration and incomplete tissue regeneration, compared with CAM alone, PVA-CAM, PVP-CAM, TSC-CAM or SBD-CAM, as shown in the xref , xref and xref ."

sparser
"From xref , it is proven that the percentage wound contraction for uncapped-CAM was significantly lower than the values for SBD-CAM, TSC-CAM, PVP-CAM and PVA-CAM on all the respective (3 rd , 6 th , 9 th , 14 th and 20 th ) days, which may be due to the absence of surface coating or capping agents in the uncapped-CAM, which are responsible for nanoparticle stability and healing potential."

sparser
"As shown in xref , wounds treated with PVA-CAM showed a greater percentage wound contraction compared to PVP-CAM, TSC-CAM, SBD-CAM, uncapped-CAM, CAM alone or the control group."

sparser
"From the results of xref , on the 3 rd day, the percentage wound contraction for PVA-CAM, PVP-CAM, TSC-CAM, SBD-CAM, uncapped-CAM, CAM alone and the control group was found to be 69.25%, 65.5%, 34.25%, 32.75%, 20.25%, 29.5% and 18.25%, respectively."

sparser
"Similarly, on the 6 th day, the percentage wound contraction for PVA-CAM, PVP-CAM, TSC-CAM, SBD-CAM, uncapped-CAM, CAM alone and the control group was found to be 81.75%, 78.5%, 44.25%, 37.75%, 31.5%, 35% and 28.25%, respectively."

sparser
"Histopathological analyses of the excision wound models in the control group (without treatment), CAM alone, uncapped-CAM, SBD-CAM, TSC-CAM, PVP-CAM and PVA-CAM on the 9 th and 14 th day after the excision wound injury are depicted using H & E and MT staining in xref , xref and xref ."

sparser
"On the 9 th day, the percentage wound contraction for PVA-CAM, PVP-CAM, TSC-CAM, SBD-CAM, uncapped-CAM, CAM alone and the control group was found to be 95.25%, 90%, 85.25%, 77%, 60.75%, 64% and 55.25%, respectively."

sparser
"Histopathological studies on treatment with PVA-CAM in the excision wound model showed a maximum amount of fibroblast presence and collagen regeneration after the 9 th day of the healing process, which was found to be comparatively more effective than CAM alone, uncapped-CAM, PVP-CAM, TSC-CAM or SBD-CAM that showed a minimal amount of fibroblast and collagen regeneration, with the presence of dense inflammation."

sparser
"These findings indicate that PVA-CAM have a predominant antibacterial activity and accelerate the healing potential of excision wound models in Wistar albino rats by enhancing angiogenesis in the wounded sections and are comparatively more efficient (among polymers) than uncapped-CAM, SBD-CAM or untreated wounds (the control)."

sparser
"On the 14 th day, the percentage wound contraction for PVA-CAM, PVP-CAM, TSC-CAM, SBD-CAM, uncapped-CAM, CAM alone and the control group was found to be 99.5%, 95%, 88.5%, 84.5%, 70.75%, 72% and 68.75%, respectively."
CALM1 affects TFS1
| 17
| 17

sparser
"These rescued recombinant MVs were designated IC-CAM H, IC-AIK-H, and IC-Tanabe H respectively ( Fig. 2 A )."

sparser
"IC-CAM H, however, exhibited slower and less efficient growth than both IC-AIK H and IC-Tanabe H ( Fig. 2 B)."

sparser
"IC-AIK H and IC-Tanabe H induced syncytia in both HeLa cells (data not shown) and NHDF as outlined in Fig. 2 C. However, the induction of syncytia by IC-CAM H was much less extensive in HeLa cells (da[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Accordingly, growth of IC-CAM H was significantly reduced in CD46-expressing HeLa cells and NHDF, and was slightly slower than that of IC323, IC-AIK H, and IC-Tanabe H in SLAM-expressing B95a cells."

sparser
"IC-CAM H was found to grow in PHA-stimulated PBL to a similar degree as the other recombinant MVs studied, although the growth kinetics was slightly slower."

sparser
"In marmoset B-lymphoid B95a cells, where SLAM is available for MV but not CD46 [48,49] , all of the recombinant MVs examined grew efficiently; however, the growth kinetics of IC-CAM H was always sligh[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"IC-CAM H did not grow efficiently in Mo-DC, even though both PHA-stimulated PBL and Mo-DC express CD46 and SLAM [50,51,53] ."

sparser
"Although syncytia formation was observed in all recombinant MV-infected B95a cells, the spreading of syncytium was always slightly slower in the IC-CAM H-infected cells when compared to that in the ce[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"In addition, growth of IC-CAM H was more reduced in CD46-expressing cells compared to SLAM-expressing cells, a result consistent with those described above, indicating that the ability of the CAM-70 H[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Thus in PHA-stimulated PBL, the CD46-dependent entry of IC-CAM H is likely to be much less efficient but the SLAM-dependent entry likely to be only slightly impaired."
CALM1 affects PPP3CA
2 2 | 9 4
CALM1 binds PPP3CA.
1 2 | 8 2
1 2 | 8 2

reach
"We found that endogenous CNA-CALM2 interaction requires KIF1Bbeta, which acts as a scaffold to potentiate and stabilize the CNA and CALM2 complex."

reach
"We conclude that KIF1Bbeta acts as a direct scaffold for CALM2 and CNA, facilitating the formation and stabilization of the CALM2 and CNA complex, relieving CNA autoinhibition, and thus enabling full [MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

reach
"Moreover, KIF1Bbeta induced co-precipitation of DRP1, in contrast to non transduced cells where DRP1 failed to co-precipitate with the CALM2 and CNA complex."

reach
"We infer that KIF1Bbeta might stabilize the CNA and CALM2 complex and is potentially required for CNA substrate recognition."

No evidence text available

reach
"We conclude that KIF1Bbeta is required for CNA-CALM2 association and enables DRP1 substrate recognition.We considered the possibility that KIF1Bbeta might potentiate CNA-CALM2 binding by affecting int[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Both CALM1 and PPP3CA play essential roles in the transduction of intracellular Ca(2+)-mediated signals, in that CALM1 encodes calcium binding protein which is a subunits of phosphorylase kinase and can bind PPP3CA regulatory domain and causes a conformational change in removing PPP3CA autoinhibitory domain from its catalytic site, i.e., activating PPP3CA ( xref )."

reach
"In contrast, addition of wild-type Flag-KIF1Bbeta or Flag-KIF1Bbeta600-1400 drastically enhanced S 35 CNA binding to DRP1 peptide and enabled co-precipitation of CALM2 and Flag-KIF1Bbeta, indicating t[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

"Calcium-bound calmodulin associates with calcineurin (cn), releasing the phosphatase from the repressive effects on an autoinhibitory domain."

reach
"We considered the possibility that KIF1Bbeta might enhance CNA-CALM2 binding by affecting the intracellular Ca 2+ concentration, since CNA binds CALM2 with higher affinity in Ca 2+ -saturated conditio[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
CALM1 activates PPP3CA.
1 | 1 2
CALM1 activates PPP3CA. 4 / 4
1 | 1 2

sparser
"The increase of calcium ion concentration directly activates CAM, which in turn activates CnA and CnB."

reach
"In response to an external cue, intracellular Ca binds to the calmodulin protein (Cam1), which then activates the calcineurin phosphatase complex (Cna1 and Cnb1)."

"Calcium-bound calmodulin associates with calcineurin (cn), releasing the phosphatase from the repressive effects on an autoinhibitory domain."

sparser
"In C. neoformans , Cna1 is activated by Cam1 and plays an important role in growth at 37 °C. Under elevated temperatures, Cna1 targets a Crz1 ortholog; the Cna1-Crz1 pathway is required for expression of chitin synthase genes CHS5 and CHS6 , with a role in cell wall structure and fungal cell survival during infection [ xref ]."
CALM1 affects GAD1
1 | 15 1
1 | 15 1

No evidence text available

reach
"In summary, in the Gad1CaM1 complex, one CaM1 molecule attaches to two Gad1–CaMBDs of neighbouring subunits in a homohexameric enzyme, activating two adjacent active sites by relief of the correspond[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

reach
"This suggests that the two adjacent Lys residues are able to rescue each other's function when one of the two is mutated to Ala.In summary, K496 and K497 fulfil a role in modulating the equilibrium be[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

reach
"In the Gad1CaM1 complex, the 415 nm-absorbing ketoenamine species is present over the entire pH range: CaM1, wrapped around two CaMBDs, keeps two AIDs away from the respective active sites."

sparser
"CaM3 interacts with CRLK1 (calcium/calmodulin-regulated receptor-like kinase 1) and AGL24 (MADS box protein) whereas CaM1 interacts with GAD (glutamate decarboxylase 1), LP1 (lipid transfer protein), AK1 (aspartokinase) and HY5 (basic leucine zipper) protein ( xref ) [ xref , xref ]."

reach
"56 Synchrotron X-ray scattering data from solutions of Gad1 and from the Gad1CaM1 complex were collected at the X33 beamline (DESY, Hamburg) using a MAR345 image plate detector."

reach
"64 The ab initio reconstructions were done with P 3 symmetry of hexameric Gad1 and of its complex with CaM1 introduced as a rigid constraint as well as without symmetry restrictions.The program BUNCH [MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

reach
"68 The conformational space of Gad1CaM1 complex was explored using the EOM approach, which takes flexibility into account by allowing for the coexistence of multiple conformations in solution."

reach
"Representative models of the Gad1CaM1 complex were taken from the multiple rigid body modelling runs to yield an initial pool of models."

reach
"14 In contrast to that result, the NMR structure by Yap and co-workers, containing Gad CaMBD peptides bound to CaM, indicated a 1:2 complex, corresponding to a 1:3 stoichiometry for the Gad1CaM1 comp[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
PCL affects CALM1
| 16
PCL binds CALM1. 10 / 16
| 16

sparser
"As previously shown, the drug release kinetics into 10 mL 1 × PBS differ between the two wound dressings, although no differences in the disk diffusion assay (release into the gel) were seen. xref Interestingly, previously reported biofilm assays revealed that the CAM-PCL dressing was more effective compared with the CAM-PCL/PEO dressing on E. coli CFT073, most likely due to the different release kinetics. xref In the current assay, both formulations with the same drug load exhibited a similar antibiofilm effect, as a 6-log difference was observed in bacterial numbers for E. coli and S. epidermidis ( xref A,C)."

sparser
"The CAM-PCL/PEO dressing was statistically more effective in inhibiting biofilm formation than the CAM-PCL dressing."

sparser
"PCL-CIP fibrous wound dressings completely prevented the development of S. aureus and E. coli biofilm, as no viable bacteria were detected in the samples, in contrast to PCL-CAM fibrous wound dressing samples, which occasionally revealed low bacterial counts ( xref A–C, D)."

sparser
"As shown before for the CAM-PCL/PEO dressing, 90% of the drug is released in the first 60 min, but for the CAM-PCL dressing, the amount of drug released is only 40% after 24 h and up to 50% after 48 h. xref Therefore, the available drug concentration after 24 h of treatment is different, being higher when using the CAM-PCL/PEO dressing."

sparser
"Differences between formulations were also observed: the inhibition of biofilm bacteria was more significant for CAM-PCL/PEO than for CAM-PCL wound dressings ( xref )."

sparser
"Strong interactions between PCL and CAM together with hydrophobicity of the system resulted in much slower drug release compared to the hydrophilic ternary system of PCL/PEO/CAM."

sparser
"After treatment of S. aureus and E. coli 24-h biofilms with PCL-CAM fibrous wound dressing or CAM solution, no significant decrease in bacterial counts was seen ( xref D, E)."

sparser
"Drug encapsulation can either increase or decrease the mechanical properties of electrospun PCL fibers. xref , xref It has been shown that incorporation of the antibacterial drug linezolid into PCL scaffolds improved their mechanical properties. xref It is known that drug–polymer interactions affect the mechanical properties of electrospun polyester fibers, xref and as the solid-state analyses in our previous study have revealed, different solvents may have affected the CAMPCL interactions at the molecular level differently. xref This may lead to different mechanical behavior of scaffolds."

sparser
"Previously developed and characterized fibrous wound dressings were used, namely PCL-CAM and pristine PCL (ES using a chloroform–methanol solvent system), xref and PCL-CIP and pristine PCL (ES using a formic acid–acetic acid solvent system), slightly modified from Zupančič et al. xref Different antibiotic-loaded dressings enabled the comparison of the antibacterial efficacy of the dressings with different drugs against dual-species wound infections (CAM vs CIP) and the effect of fibers with different morphologies."

sparser
"PCL-CAM wound dressing was tested only on S. aureus and E. coli biofilm due to the P. aeruginosa resistance to CAM. xref PCL-CIP dressing was tested on all three dual-species biofilm combinations: S. aureus with E. coli , S. aureus with P. aeruginosa , and E. coli with P. aeruginosa ."
| 16
| 16

reach
"The various studies listed above [28-31] showed that such CAM, when expressed in cells lacking CAM activity, can lead to shape changes and specific cell adhesion."

reach
"It is commonly believed that the transendothelial migration of the lymphocyte is governed by the intracellular domain of ICAM-1 ( Millan et al., 2006 ) and by the coordinated expression of adhesion mo[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

reach
"However, the application of anti-CAM Fab to retinal cells cultured through to neurite formation [36], to the outgrowth ofneurites from spinal ganglion cultures [38] and to isolated embryonic retina in[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

reach
"If on the other hand a particular CAM mediates cell to cell adhesion and cells aggregate, they may become more mobile and protected from cytotoxicity."

reach
"It 's worth mentioning that CAM could mediate the adhesion of cancer cells and extracellular matrix [9,10]."

reach
"To examine the function of axoglial CAMs, we tested whether enhanced CAM mediated adhesion between OLs and neurons could affect myelination."

reach
"These observations raise the question as to what kind of agents could be utilized in an attempt to block migration of leukemic blasts in a therapeutic manner during induction therapy, and the candidat[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

reach
"Integrins are a basal and principal CAM that mediate cell adhesion to make solid tumor cells grow in three-dimensional architectures, and integrins are widely expressed in almost all cancer cells orig[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

reach
"We found, as has also been described by others [21,22], that C- CAM 1 could mediate adhesion in vitro."

reach
"The most provocative, however, are those that indicate that CAM mediated adhesion may lead to changes in gene expression and those that suggest that the expression of CAM genes may be regulated by the[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
CALM1 affects PCL
| 16
PCL binds CALM1. 10 / 16
| 16

sparser
"As previously shown, the drug release kinetics into 10 mL 1 × PBS differ between the two wound dressings, although no differences in the disk diffusion assay (release into the gel) were seen. xref Interestingly, previously reported biofilm assays revealed that the CAM-PCL dressing was more effective compared with the CAM-PCL/PEO dressing on E. coli CFT073, most likely due to the different release kinetics. xref In the current assay, both formulations with the same drug load exhibited a similar antibiofilm effect, as a 6-log difference was observed in bacterial numbers for E. coli and S. epidermidis ( xref A,C)."

sparser
"The CAM-PCL/PEO dressing was statistically more effective in inhibiting biofilm formation than the CAM-PCL dressing."

sparser
"PCL-CIP fibrous wound dressings completely prevented the development of S. aureus and E. coli biofilm, as no viable bacteria were detected in the samples, in contrast to PCL-CAM fibrous wound dressing samples, which occasionally revealed low bacterial counts ( xref A–C, D)."

sparser
"As shown before for the CAM-PCL/PEO dressing, 90% of the drug is released in the first 60 min, but for the CAM-PCL dressing, the amount of drug released is only 40% after 24 h and up to 50% after 48 h. xref Therefore, the available drug concentration after 24 h of treatment is different, being higher when using the CAM-PCL/PEO dressing."

sparser
"Differences between formulations were also observed: the inhibition of biofilm bacteria was more significant for CAM-PCL/PEO than for CAM-PCL wound dressings ( xref )."

sparser
"Strong interactions between PCL and CAM together with hydrophobicity of the system resulted in much slower drug release compared to the hydrophilic ternary system of PCL/PEO/CAM."

sparser
"After treatment of S. aureus and E. coli 24-h biofilms with PCL-CAM fibrous wound dressing or CAM solution, no significant decrease in bacterial counts was seen ( xref D, E)."

sparser
"Drug encapsulation can either increase or decrease the mechanical properties of electrospun PCL fibers. xref , xref It has been shown that incorporation of the antibacterial drug linezolid into PCL scaffolds improved their mechanical properties. xref It is known that drug–polymer interactions affect the mechanical properties of electrospun polyester fibers, xref and as the solid-state analyses in our previous study have revealed, different solvents may have affected the CAMPCL interactions at the molecular level differently. xref This may lead to different mechanical behavior of scaffolds."

sparser
"Previously developed and characterized fibrous wound dressings were used, namely PCL-CAM and pristine PCL (ES using a chloroform–methanol solvent system), xref and PCL-CIP and pristine PCL (ES using a formic acid–acetic acid solvent system), slightly modified from Zupančič et al. xref Different antibiotic-loaded dressings enabled the comparison of the antibacterial efficacy of the dressings with different drugs against dual-species wound infections (CAM vs CIP) and the effect of fibers with different morphologies."

sparser
"PCL-CAM wound dressing was tested only on S. aureus and E. coli biofilm due to the P. aeruginosa resistance to CAM. xref PCL-CIP dressing was tested on all three dual-species biofilm combinations: S. aureus with E. coli , S. aureus with P. aeruginosa , and E. coli with P. aeruginosa ."
CALM1 affects AP180
| 16
AP180 binds CALM1. 10 / 13
| 13

sparser
"The CALM and AP180 ANTH domains bind to cargo proteins in the VAMP family [ xref , xref , xref , xref , xref ]."

sparser
"In addition, recent results show that the ENTH (epsin NH2-terminal homology) domain [4] of epsin [5•] and the closely related ENTH-like domain of CALM [6••] and AP180 [7•] bind specifically to[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"The ANTH domain represents an α-helical structure containing a lipid binding site which mediates the association of AP180 and CALM with PI(4,5)P 2 and therefore their membrane recruitment (Ford et al., xref )."

sparser
"AP180 and its ubiquitously expressed close paralog CALM ( Bushlin et al., 2008; Koo et al., 2011; Maritzen et al., 2012; Miller et al., 2011 ) directly interact with and facilitate endocytosis of Syb2[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Nevertheless, if AP180 and CALM are exclusively associated with the CCVs at the plasma membrane, one would expect to see the immunogold particles located in close proximity to the cell surface."

sparser
"This subfamily has limited homology with the Ub-binding region of the CALM-AP180 subfamily and residues that might coordinate Ub-binding in this ANTH subfamily were not obvious by sequence alignment alone."

sparser
"Biochemically, AP180 and CALM can bind to PtdIns(4,5)P 2 and clathrin simultaneously, enabling membrane tethering of clathrin."

sparser
"In addition to their pivotal function in recruiting the endocytic machinery, both AP180 and CALM bind to the N-terminal half of the Syb2 SNARE motif through their ANTH domain (Figure xref )."

sparser
"For Synaptobrevin2 this confinement was shown to depend on its interactions with its endocytic adaptors AP180 and CALM, presumably aided by a presynaptic diffusion barrier of unknown identity (Gimber et al., xref )."

sparser
"The association of Synaptobrevin2 with its adaptors AP180 and CALM or with Synaptophysin1 cannot facilitate the removal of cis-SNARE complexes since these interactions only work with non-SNARE-complexed Synaptobrevin2."
AP180 binds CALM1 and Clathrin. 3 / 3
| 3

sparser
"However, both AP180 and CALM S1&2 mutants did not bind clathrin significantly different to the non-specific binding of GST alone, whereas Site 1 alone was significantly different to GST alone for both AP180 ( P < 0.01) and CALM ( P < 0.001)."

sparser
"The above experiments demonstrated that Site 1, in particular, has a large effect on the interaction of clathrin with AP180 or CALM."

sparser
"Despite that AP180 and CALM are highly abundant components in their respective CME roles, there is no similarly detailed mechanism of AP180 or CALM binding to clathrin, as there is with AP2."
VEGF affects CALM1
| 15
VEGF activates CALM1. 10 / 15
| 15

reach
"(a) VEGF 0 (DMEM soaked implant), VEGF 30 (30 ng/implant), VEGF 100 (100 ng/implant) and VEGF 300 (300 ng / implant) induced CAM angiogenic response in absence of coronary endothelial cells (AcEC) and in presence of coronary endothelial cells (2 A 106 cells/ml, 0.5 A 104 cells and implant) of normal (+ ncEC) rats, diabetic rats 30 ds."

reach
"Effect of eNOS inhibitor, L-NAME (100 mM, l-N), PI3K inhibitor, wortmanin (100 nM, w) and PKC inhibitor, chelerythrine (10 mM, ch) pretreatment on (b) VEGF 100 induced CAM angiogenic response and (c) VEGF 300 (300 ng/ml) induced nitric oxide release activity of + TnircEC."

reach
"(a) VEGF 0 (DMEM soaked implant), VEGF 30 (30 ng/implant), VEGF 100 (100 ng/implant) and VEGF 300 (300 ng / implant) induced CAM angiogenic response in absence of coronary endothelial cells (AcEC), in presence of ischemia reperfusion injured coronary endothelial cells (2 A 106 cells/ml, 0.5 A 104 cells and implant) of diabetic 60 ds."

reach
"Effect of eNOS inhibitor, L-NAME (100 mM, l-N), PI3K inhibitor, wortmanin (100 nM, w) and PKC inhibitor, chelerythrine (10 mM, ch) pretreatment on (b) VEGF 100 induced CAM angiogenic response and (c) VEGF 300 (300 ng/ml) induced nitric oxide release activity of +30 / TdcEC."

reach
"Effect of eNOS inhibitor, L-NAME (100 mM, l-N), PI3K inhibitor, wortmanin (100 nM, w) and PKC inhibitor, chelerythrine (10 mM, ch) pretreatment on (b) VEGF 300 induced CAM angiogenic response and (c) VEGF 300 (300 ng/ml) induced nitric oxide release activity of +60 / TdcEC."

reach
"Effect of eNOS inhibitor, L-NAME (100 mM, l-N), PI3K inhibitor, wortmanin (100 nM, w) and PKC inhibitor, chelerythrine (10 mM, ch) pretreatment on (b) VEGF 100 induced CAM angiogenic response and (c) VEGF 300 induced nitric oxide release activity of + ncEC."

reach
"Effect of eNOS inhibitor, L-NAME (100 mM, l-N), PI3K inhibitor, wortmanin (100 nM, w) and PKC inhibitor, chelerythrine (10 mM, ch) pretreatment on (b) VEGF 100 induced CAM angiogenic response and (c) VEGF 300 (300 ng/ml) induced nitric oxide release activity of + TncEC."

reach
"However, it is possible that VEGF was not present in sufficient concentration to stimulate the CAM in Fuchs et al 's experiments (1985) and that the placental tissue contained other growth factors wit[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

reach
"VEGF stimulates NO production initially by increasing intracellular Ca 2 + levels and subsequent Ca 2 + -calmodulin dependent activation of eNOS, and later by increasing intracellular eNOS message and[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

reach
"Contributions to endothelial activation and proangiogenic processes are made by CAM-1 and ICAM-1, which can be induced by vascular endothelial growth factor (VEGF) and cytokines [65]."
CALM2 affects CALM1
1 | 3 11
1 | 3 7

sparser
"The 3 calmodulin genes ( CALM1-3 ) were scored separately but discussed as a group because they all encode for an identical protein. xref CALM1 and CALM2 were first associated with LQTS by exome sequencing of 2 unrelated infants with QT prolongation where de novo variants were identified. xref Subsequent studies uncovered further genetic evidence for these genes, including CALM3. xref – xref Most recently, the International Calmodulinopthy Registry has published a series of 36 LQTS cases secondary to rare variants distributed among all 3 CALM genes. xref In all cases identified, no other family members were found to be phenotype-positive and were thus concordant with de novo variants, although not in all families was this proven by sequencing of both parents and confirmation of paternity."

reach
"CaM1 Binds to the CaM N-lobe and CaM2 Binds to the CaM C-lobe.."

sparser
"CaM binding decreases the CNG channel-binding affinity for cGMP and causes decreased Ca 2+ influx. xref , xref Two CaM-binding sites are located in CNGB1 called CaM1 (residues 565–589) and CaM2 (residues 1120–1147) ( xref ). xref , xref , xref CaM1 is required for Ca 2+ -dependent modulation of the CNGA1/CNGB1 heteromeric channels. xref , xref The function of CaM2 is not known, but CaM2 is located adjacent to the CNBD where it could affect ligand binding. xref A recent cryoEM structure of the retinal CNG channel revealed that a helix within CNGB1 is bound to the C-terminal domain of CaM (residues 80–149, called the C-lobe). xref However, the cryoEM structure lacked sufficient resolution to distinguish whether the CaM C-lobe is bound to CaM1 or CaM2, and the CaM N-lobe (residues 1–80) was completely missing in the structure."

sparser
"The efficiency of these tools facilitated analysis of the functions of the essential CaM3 gene as well as the synthetic lethal interaction between CaM1 and CaM2 ."

sparser
"Ca 2+ -free CaM Exhibits Very Weak Binding to CaM1 and CaM2."

sparser
"Peptide fragments of CaM1 (residues 565–589) and CaM2 (residues 1120–1147) were shown previously to bind to Ca 2+ -bound CaM, xref , xref but the binding of CaM1 and CaM2 to Ca 2+ -free CaM has not been reported."

sparser
"Ca 2+ -free CaM (apoCaM) exhibits very weak binding to CaM1 or CaM2 that is likely not physiologically relevant."

sparser
"Alternatively, a single CaM might bind to one CNGB1 if the two CaM lobes (from a single CaM) each bind separately to CaM1 and CaM2."

reach
"Interestingly, a difference in fluorescence amplitudes between Cam1 and Cam2 binding to the IQ12 motif indicated an impact upon the conformation of the lever arm (Figure 2G), providing a potential mechanism to control Myo1 motor activity directly."

reach
"Peptide fragments of CaM1 (residues 565–589) and CaM2 (residues 1120–1147) were shown previously to bind to Ca -bound CaM, but the binding of CaM1 and CaM2 to Ca -free CaM has not been reported."
| 4

sparser
"Collectively, these findings indicate that CaM1, CaM2 and CaM3 interact with the molecular motor MyoH at the conoid, likely regulating its activity in a calcium-dependent manner."

sparser
"Mutations in human genes CALM1, CALM2, and CALM3 have been associated with life-threatening heart disorders, such as long QT syndrome (LQTS) and catecholaminergic polymorphic ventricular tachycardia."

sparser
"There are three CaM genes producing identical proteins [20] , which are all expressed in cardiac tissue and mutations in CALM1, CALM2 or CALM3 have been associated with potentially life-threatening a[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Recently, mutations in genes encoding the ubiquitous Ca 2+ sensing protein calmodulin (CaM), have been discovered as a novel genetic basis for congenital arrhythmia susceptibility. xref – xref At least 12 mostly de novo mutations have been discovered in CALM1, CALM2, and CALM3 associated with LQTS, CPVT or idiopathic ventricular fibrillation."
| 10 5
CALM1 activates angiogenesis.
| 8
| 8

reach
"The CAM assay supports the observation that TNFalpha induces neovascularization as reported before [38] and the active principles of Triphala, CA, CI, GA as well as the AlE inhibit angiogenesis induce[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

reach
"Together, these findings suggest that integrin alphavbeta3 and MMP-2 associate on the same vascular sprouts during cytokine induced angiogenesis on the chick CAM or tumor induced angiogenesis within t[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

reach
"The CAM (Chick Chorioallantoic Membrane) model allows the assessment of the degree of angiogenesis, as well as the quality of the newly formed vessels, when intervening vascular endothelial growth factors (VEGF) or conversely, factors that inhibit the development of new blood vessels, such as antiangiogenic drugs."

reach
"The CAM assay supports the observation that TNFalpha induces neovascularization as reported before [38] and the active principles of Triphala, CA, CI, GA as well as the AlE inhibit angiogenesis induce[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

reach
"The anti-angiogenic capacity of Serpin E1 is further supported by in vivo CAM data showing recombinant Serpin E1 preventing FGF2 induced angiogenesis."

reach
"Angiogenesis Inhibition Data were obtained by the chorioallantoic membrane (CAM) test, an accepted in vivo angiogenesis assay [12, 13] that observes the inhibition of the initial embryonic vas- culari[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

reach
"In addition, antimetastatic activities for complexes 1 and 3 were observed by inhibition of cell migration by the wound healing assay and Boyden chamber assay, as well as inhibition of angiogenesis caused by MDA-MB-231 tumor cells in the CAM model."

reach
"Fig. 2 B shows the effects of LY294002 on angiogenin induced angiogenesis in the chick embryo chorioallantoic membrane (CAM) in vivo."
CALM1 inhibits angiogenesis.
| 2 5
| 2 5

sparser
"We have found that CAM inhibits tumor angiogenesis, growth and metastasis of mouse B16 melanoma cells (Yatsunami, unpublished data)."

sparser
"Some, including our group, have reported that CAM inhibits neovascularization [ xref , xref , xref , xref ]."

sparser
"We found that CAM and RXM inhibited angiogenesis induced by human lung cancer cells and mouse melanoma cells in a mouse dorsal air sac model [12,13] ."

reach
"We have found that CAM inhibits tumor angiogenesis, growth and metastasis of mouse B16 melanoma cells (Yatsunami, unpublished data)."

sparser
"In addition to a direct effect on tumour cells, there is evidence that CAM can inhibit tumour-induced angiogenesis in mice [ xref ]."

reach
"We found that CAM and RXM inhibited angiogenesis induced by human lung cancer cells and mouse melanoma cells in a mouse dorsal air sac model [12,13]."

sparser
"These data indicate that inhibition of in vivo angiogenesis by CAM administered systematically may not be attributable to its effects on the implanted lung cancer cells, but rather to its effects on e[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
CALM1 affects CALM2
1 | 3 11
1 | 3 7

sparser
"The 3 calmodulin genes ( CALM1-3 ) were scored separately but discussed as a group because they all encode for an identical protein. xref CALM1 and CALM2 were first associated with LQTS by exome sequencing of 2 unrelated infants with QT prolongation where de novo variants were identified. xref Subsequent studies uncovered further genetic evidence for these genes, including CALM3. xref – xref Most recently, the International Calmodulinopthy Registry has published a series of 36 LQTS cases secondary to rare variants distributed among all 3 CALM genes. xref In all cases identified, no other family members were found to be phenotype-positive and were thus concordant with de novo variants, although not in all families was this proven by sequencing of both parents and confirmation of paternity."

reach
"CaM1 Binds to the CaM N-lobe and CaM2 Binds to the CaM C-lobe.."

sparser
"CaM binding decreases the CNG channel-binding affinity for cGMP and causes decreased Ca 2+ influx. xref , xref Two CaM-binding sites are located in CNGB1 called CaM1 (residues 565–589) and CaM2 (residues 1120–1147) ( xref ). xref , xref , xref CaM1 is required for Ca 2+ -dependent modulation of the CNGA1/CNGB1 heteromeric channels. xref , xref The function of CaM2 is not known, but CaM2 is located adjacent to the CNBD where it could affect ligand binding. xref A recent cryoEM structure of the retinal CNG channel revealed that a helix within CNGB1 is bound to the C-terminal domain of CaM (residues 80–149, called the C-lobe). xref However, the cryoEM structure lacked sufficient resolution to distinguish whether the CaM C-lobe is bound to CaM1 or CaM2, and the CaM N-lobe (residues 1–80) was completely missing in the structure."

sparser
"The efficiency of these tools facilitated analysis of the functions of the essential CaM3 gene as well as the synthetic lethal interaction between CaM1 and CaM2 ."

sparser
"Ca 2+ -free CaM Exhibits Very Weak Binding to CaM1 and CaM2."

sparser
"Peptide fragments of CaM1 (residues 565–589) and CaM2 (residues 1120–1147) were shown previously to bind to Ca 2+ -bound CaM, xref , xref but the binding of CaM1 and CaM2 to Ca 2+ -free CaM has not been reported."

sparser
"Ca 2+ -free CaM (apoCaM) exhibits very weak binding to CaM1 or CaM2 that is likely not physiologically relevant."

sparser
"Alternatively, a single CaM might bind to one CNGB1 if the two CaM lobes (from a single CaM) each bind separately to CaM1 and CaM2."

reach
"Interestingly, a difference in fluorescence amplitudes between Cam1 and Cam2 binding to the IQ12 motif indicated an impact upon the conformation of the lever arm (Figure 2G), providing a potential mechanism to control Myo1 motor activity directly."

reach
"Peptide fragments of CaM1 (residues 565–589) and CaM2 (residues 1120–1147) were shown previously to bind to Ca -bound CaM, but the binding of CaM1 and CaM2 to Ca -free CaM has not been reported."
| 4

sparser
"Collectively, these findings indicate that CaM1, CaM2 and CaM3 interact with the molecular motor MyoH at the conoid, likely regulating its activity in a calcium-dependent manner."

sparser
"Mutations in human genes CALM1, CALM2, and CALM3 have been associated with life-threatening heart disorders, such as long QT syndrome (LQTS) and catecholaminergic polymorphic ventricular tachycardia."

sparser
"There are three CaM genes producing identical proteins [20] , which are all expressed in cardiac tissue and mutations in CALM1, CALM2 or CALM3 have been associated with potentially life-threatening a[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Recently, mutations in genes encoding the ubiquitous Ca 2+ sensing protein calmodulin (CaM), have been discovered as a novel genetic basis for congenital arrhythmia susceptibility. xref – xref At least 12 mostly de novo mutations have been discovered in CALM1, CALM2, and CALM3 associated with LQTS, CPVT or idiopathic ventricular fibrillation."
Rbr affects CALM1
| 14
| 14

sparser
"Further studies are necessary to dissect the mechanisms used by tumour cells and non-tumour cells to overcome CAM-RR and CAM-DR in order to design targeted therapies directed to specific signalling mo[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"As mentioned already, tumor cells grown in a 3D environment have increased resistance to stressors, such as IR, compared to 2D cultures; this phenomenon is known as cell-adhesion mediated radioresistance (CAM-RR)."

sparser
"Searching for specific integrins in CAM-RR or -DR, Kremer et al. [46] found a dependence of radiation-induced G2 cell cycle arrest in human prostate epithelial but not prostate epithelial cancer cells[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Cell adhesion-mediated radiation (CAM-RR) and drug (CAM-DR) resistance hold clinical relevance and are inevitably linked to aggravated tumor control or treatment failure."

sparser
"This resistance to radiation has been contributed to a phenomenon called cell adhesion-mediated radioresistance (CAM-RR) [ xref , xref ]."
| PMC

sparser
"Integrins and adhesion of cells to ECM confer higher resistance to ionizing radiation and cytotoxic drug; a phenomenon known as CAM-RR and CAM-DR [173–184] ."

sparser
"However, some questions related to both CAM-RR and CAM-DR remain largely untouched."

sparser
"This is thought to enable the cell to optimize the repair of the DNA [186,187] and seems at least partly to be responsible for CAM-DR and CAM-RR."

sparser
"This reduced sensitivity has been attributed to CAM-RR which in turn has been shown to be a consequence of strong integrin clustering at the site of cellular adhesion to the matrix, aiding in better cell survival when compared to 2D cells [ xref ]."
| PMC

sparser
"CAM-RR is analogous term of CAM-DR referring to cell adhesion-mediated resistance to radiotherapy [27] ."
USP6 affects CALM1
| 14
| 14

sparser
"Also, among various treatments, the leaves co-infiltrated with pUS-US71GFP and pCAM-USP6 showed the strongest green fluorescence ( xref B)."

sparser
"We then examined the effect of FveIF3g on P6 trans-activating activity by co-infiltrating N. benthamiana leaves with pUS-US71GFP, pCAM-USP6, and pCAM-FveIF3g or pUS-US71GFP, pCAM-USP6, and pCAM-2300 (control)."

sparser
"By 3 days post agro-infiltration (dpai), only the leaves co-infiltrated with pCAM-USP6 and pUS-US71GFP showed strong GFP fluorescence ( xref B)."

sparser
"Western blot assays showed a high amount of the GFP protein had accumulated in the leaves co-infiltrated with pCAM-USP6 and pUS-US71GFP."

sparser
"GFP fluorescence in the leaves co-infiltrated with pUS-US71GFP, pCAM-USP6, and pCAM-FveIF3g was much weaker than it was in the control leaves."

sparser
"In contrast, a strong GFP fluorescence was observed in the pCAM-USP6 and US71GFP co-expressed leaves."

sparser
"Western blot results showed again that the expression level of the P6 protein was much lower in the leaves co-infiltrated with pUS-US71GFP, pCAM-USP6, and pCAM-FveIF3g compared with the control leaves ( xref D,E)."

sparser
"PCAM-USP6 was co-infiltrated with these three bicistronic constructs into N. benthamiana leaves."

sparser
"To determine which SVBV-encoded protein was a translation trans-activator, we cloned individual SVBV-US ORFs into the pCAM-2300 vector to produce pCAM-USP1, pCAM-USP2, pCAM-USP3, pCAM-USP4, pCAM-USP5, and pCAM-USP6."

sparser
"Leaves co-infiltrated with pCAM-USP6 and an empty vector (pCAM-2300) were used as a negative control."
MLO affects CALM1
| 14
| 14

sparser
"This may indicate that CAM binding to MLO proteins is a fine-tuned and balanced process, highlighting its putative physiological relevance in the context of MLO function."

sparser
"Site-directed mutagenesis has revealed key amino acid residues in the barley Mlo calcium-binding domain (CAMBD) that, when mutated, affect the MLO-CAM association."

sparser
"Our data shed further light on the interaction of MLO and CAM proteins and provide a comprehensive comparative assessment of different types of protein-protein interaction assays with wild-type and mutant versions of an integral membrane protein."

sparser
"Site-directed mutagenesis has revealed the importance of key hydrophobic amino acid residues within the CAMBD for the establishment of the MLO-CAM interaction."

sparser
"Amino acid substitutions of these essential residues with positively charged arginines largely prevented the calcium-dependent binding of CAM to the CAMBDs of barley and rice MLO proteins ( xref ; xref )."

sparser
"This mutation is analogous to the one previously found to abolish CAM binding to barley and rice MLO proteins ( xref ; xref )."

sparser
"This may indicate that CAM binding to MLO proteins is a fine-tuned and balanced process, highlighting its putative physiological relevance in the context of MLO function."

sparser
"This binding is prohibited by mutation of two amino acid residues (L 18 R and W 21 R, corresponding to L 456 R and W 459 R in full-length MLO2) that are in analogous positions within the CAMBD to those that were previously identified as being essential for the binding of CAM to barley and rice MLO proteins ( xref ; xref )."

sparser
"Site-directed mutagenesis has revealed key amino acid residues in the barley Mlo calmodulin-binding domain (CAMBD) that, when mutated, affect the MLOCAM association."

sparser
"Our data shed further light on the interaction of MLO and CAM proteins and provide a comprehensive comparative assessment of different types of protein–protein interaction assays with wild-type and mutant versions of an integral membrane protein."
HP affects CALM1
| 14
| 14

sparser
"HP-CAM modification yields a positional isomer of APAP-modification on all cysteines and modified peptides were identified using the same criteria as APAP-modified peptides from database searching."

sparser
"In total, 1466 HP-CAM-modified proteins with 4554 distinct HP-CAM peptides were identified in the mouse control sample; and 1073 HP-CAM-modified proteins with 3599 distinct HP-CAM-peptides were found in the rat control sample."

sparser
"The resulting list of HP-CAM peptides was further filtered to include peptides of a select list of potential protein targets."

sparser
"MRM transitions of modified peptides were also monitored in adjacent fractions as those where they were detected in HP-CAM samples, since peptides can often elute in more than one fraction."

sparser
"APAP-treated and HP-CAM alkylated liver digests were analyzed by scheduled LC-MRM methods specific to each SPE fraction."

sparser
"LC-MRM peaks were integrated, and relative peak areas for each transition (transition/sum of all transitions) as well as retention times were compared with HP-CAM signals for the same peptide. xref shows a representative example of a confirmed target LC-MRM for a mouse CYP 2C29 peptide, found via data-dependent MS/MS and confirmed by MRM analyses."

sparser
"The mouse peptide specifically was a very long peptide with 33 residues and a charge state of 4+, making it quite difficult to screen for via LC-MRM without a corresponding signal in the HP-CAM reference sample."

sparser
"This large peptide was not easily amenable to MRM analysis due to the lack of significantly intense fragment ions, as well as no appropriate HP-CAM peptide for method optimisation."

sparser
"HP-CAM peptides were used to confirm which fractions to monitor for each modified peptide, as well as LC retention time and MS/MS fragmentation behavior, with relatively high signal intensity."

sparser
"An important caveat to the MRM method, however, is that method development is more time-consuming, and in the case of APAP-modified peptides for this study, the custom alkylation HP-CAM peptides were crucial for confirmation."
ERVK-18 affects CALM1
| 14
| 14

sparser
"The ethics application (ZJ‐2021‐1) was approved by the CAMSU Animal Care and Use Committee."

sparser
"Depdc5 floxed mice, originated from the HEPD0734_3_G10 ES clone, were provided by the CAM-SU GRC, Soochow University (Suzhou, China)."

sparser
"We then injected a mutant mouse ES cell obtained from the ES cell bank of CAM-SU, which contained a modified Fadd genome region to induce Fadd knockout."

sparser
"Six-month-old wild-type (WT) and hepcidin knockout ( Hep −/− ) male mice were obtained from the Cambridge-Soochow University Genome Resource Centre (CAM-SU GRC)."

sparser
"Female GPER-null mice were established from CAM-SU Genomic Resource Center (Suzhou, China), the gene information was provided in Table2 in Supplementary materials."

sparser
"Ttbk2 flox/flox mice were obtained from the Center for Animal Model, Soochow University (CAMSU GRC), originally generated by the EUCOMM project."

sparser
"REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Anti-RanGAP1 antibody [EPR3295] Abcam Cat#ab92360; RRID: AB_10564003 Anti-Sp7 / Osterix antibody Abcam Cat#ab209484; RRID: AB_2892207 Goat Anti-mouse I[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"This protocol was approved by the Animal Care and Use Committee of Cambridge-Suda Genomic Resource Center (CAM-SU) at Soochow University."

sparser
"Wild type (Wt) and hepcidin knockout (Hepc −/− ) mice were obtained from the Cambridge-Soochow University Genome Resource Centre (CAM-SU GRC)."

sparser
"On this basis, Ddx20 Gene Systemic Knockout Heterozygous Mice Ddx20 -KO First was constructed from the Cambridge-SU Genome Resource Center (CAM-SU GRC) at Soochow University."
CM affects CALM1
| 14
CM binds CALM1. 10 / 14
| 14

sparser
"Furthermore, A2780 invasion rates showed no differences after culture with Mϕ-CM, Cis-Mϕ-CM, CAM-CM, and Cis-CAM-CM ( Fig. S1A )."

sparser
"This revealed that Cis-CAM-CM led to up-regulation of the mesenchymal markers N-cadherin and Snail, and down-regulation of the epithelial marker E-cadherin in A2780 cells, compared to CAM-CM ( Fig. 1 [MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"In addition, CCK-8 experiments revealed that CAM-CM significantly decreased the survival rates of ovarian cancer cells compared to fresh DMEM and Mϕ-CM, comfirming the anti-tumor effect of CAMs, where[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Moreover, CAM-CM caused significantly more apoptosis in ovarian cancer cells than in fresh DMEM and Mϕ-CM, as demonstrated by flow cytometry-detected increase of annexin V-positive cells."

sparser
"One possible problematic outcome of such dismissal is that patients, who already anticipate this negative response, may choose not to discuss their concurrent use of treatments with their HCP, and as such may assume the entire burden of managing the interactions of CM and CAM without any medical guidance, which puts them at a great health risk [ xref , xref ]."

sparser
"However, there were no significant differences in apoptosis rates between the ovarian cancer cells treated with CAM-CM and Cis-CAM-CM ( Fig. 2 D and E)."

sparser
"After culture of A2780 in DMEM, CAM-CM, and Cis-CAM-CM, there were no significant differences in the 50% inhibitory concentration (IC50) of cisplatin ( Fig. 2 F), similar to the result in SKOV3 cells [MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"To explore the potential mechanism by which cisplatin-stimulated CAMs promote ovarian cancer cell migration, luminex liquid suspension chip detection was adopted to compare the differential expression[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Next, we used anti-CCL20 neutralizing antibody to block the effect of CCL20 in CAM-CM and Cis-CAM-CM, and found that the migration rate of cancer cells remained unchanged after neutralizing CCL20 in C[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"This revealed IL-1β, CCL20, CX3CL1, CXCL2, CXCL1, and MIF as the six most highly upregulated proteins in Cis-CAM-CM compared to levels in CAM-CM ( Fig. 3 A)."
CALM1 affects rbr
| 14
| 14

sparser
"Further studies are necessary to dissect the mechanisms used by tumour cells and non-tumour cells to overcome CAM-RR and CAM-DR in order to design targeted therapies directed to specific signalling mo[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"As mentioned already, tumor cells grown in a 3D environment have increased resistance to stressors, such as IR, compared to 2D cultures; this phenomenon is known as cell-adhesion mediated radioresistance (CAM-RR)."

sparser
"Searching for specific integrins in CAM-RR or -DR, Kremer et al. [46] found a dependence of radiation-induced G2 cell cycle arrest in human prostate epithelial but not prostate epithelial cancer cells[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Cell adhesion-mediated radiation (CAM-RR) and drug (CAM-DR) resistance hold clinical relevance and are inevitably linked to aggravated tumor control or treatment failure."

sparser
"This resistance to radiation has been contributed to a phenomenon called cell adhesion-mediated radioresistance (CAM-RR) [ xref , xref ]."
| PMC

sparser
"Integrins and adhesion of cells to ECM confer higher resistance to ionizing radiation and cytotoxic drug; a phenomenon known as CAM-RR and CAM-DR [173–184] ."

sparser
"However, some questions related to both CAM-RR and CAM-DR remain largely untouched."

sparser
"This is thought to enable the cell to optimize the repair of the DNA [186,187] and seems at least partly to be responsible for CAM-DR and CAM-RR."

sparser
"This reduced sensitivity has been attributed to CAM-RR which in turn has been shown to be a consequence of strong integrin clustering at the site of cellular adhesion to the matrix, aiding in better cell survival when compared to 2D cells [ xref ]."
| PMC

sparser
"CAM-RR is analogous term of CAM-DR referring to cell adhesion-mediated resistance to radiotherapy [27] ."
CALM1 affects USP6
| 14
| 14

sparser
"Also, among various treatments, the leaves co-infiltrated with pUS-US71GFP and pCAM-USP6 showed the strongest green fluorescence ( xref B)."

sparser
"We then examined the effect of FveIF3g on P6 trans-activating activity by co-infiltrating N. benthamiana leaves with pUS-US71GFP, pCAM-USP6, and pCAM-FveIF3g or pUS-US71GFP, pCAM-USP6, and pCAM-2300 (control)."

sparser
"By 3 days post agro-infiltration (dpai), only the leaves co-infiltrated with pCAM-USP6 and pUS-US71GFP showed strong GFP fluorescence ( xref B)."

sparser
"Western blot assays showed a high amount of the GFP protein had accumulated in the leaves co-infiltrated with pCAM-USP6 and pUS-US71GFP."

sparser
"GFP fluorescence in the leaves co-infiltrated with pUS-US71GFP, pCAM-USP6, and pCAM-FveIF3g was much weaker than it was in the control leaves."

sparser
"In contrast, a strong GFP fluorescence was observed in the pCAM-USP6 and US71GFP co-expressed leaves."

sparser
"Western blot results showed again that the expression level of the P6 protein was much lower in the leaves co-infiltrated with pUS-US71GFP, pCAM-USP6, and pCAM-FveIF3g compared with the control leaves ( xref D,E)."

sparser
"PCAM-USP6 was co-infiltrated with these three bicistronic constructs into N. benthamiana leaves."

sparser
"To determine which SVBV-encoded protein was a translation trans-activator, we cloned individual SVBV-US ORFs into the pCAM-2300 vector to produce pCAM-USP1, pCAM-USP2, pCAM-USP3, pCAM-USP4, pCAM-USP5, and pCAM-USP6."

sparser
"Leaves co-infiltrated with pCAM-USP6 and an empty vector (pCAM-2300) were used as a negative control."
CALM1 affects MLO
| 14
| 14

sparser
"This may indicate that CAM binding to MLO proteins is a fine-tuned and balanced process, highlighting its putative physiological relevance in the context of MLO function."

sparser
"Site-directed mutagenesis has revealed key amino acid residues in the barley Mlo calcium-binding domain (CAMBD) that, when mutated, affect the MLO-CAM association."

sparser
"Our data shed further light on the interaction of MLO and CAM proteins and provide a comprehensive comparative assessment of different types of protein-protein interaction assays with wild-type and mutant versions of an integral membrane protein."

sparser
"Site-directed mutagenesis has revealed the importance of key hydrophobic amino acid residues within the CAMBD for the establishment of the MLO-CAM interaction."

sparser
"Amino acid substitutions of these essential residues with positively charged arginines largely prevented the calcium-dependent binding of CAM to the CAMBDs of barley and rice MLO proteins ( xref ; xref )."

sparser
"This mutation is analogous to the one previously found to abolish CAM binding to barley and rice MLO proteins ( xref ; xref )."

sparser
"This may indicate that CAM binding to MLO proteins is a fine-tuned and balanced process, highlighting its putative physiological relevance in the context of MLO function."

sparser
"This binding is prohibited by mutation of two amino acid residues (L 18 R and W 21 R, corresponding to L 456 R and W 459 R in full-length MLO2) that are in analogous positions within the CAMBD to those that were previously identified as being essential for the binding of CAM to barley and rice MLO proteins ( xref ; xref )."

sparser
"Site-directed mutagenesis has revealed key amino acid residues in the barley Mlo calmodulin-binding domain (CAMBD) that, when mutated, affect the MLOCAM association."

sparser
"Our data shed further light on the interaction of MLO and CAM proteins and provide a comprehensive comparative assessment of different types of protein–protein interaction assays with wild-type and mutant versions of an integral membrane protein."
CALM1 affects KRAS
5 5 2 | 2
CALM1 binds KRAS.
5 2 | 2
5 2 | 2

sparser
"SCN5A could activate PKA-dependent MAPK pathways in CRCs [ 27 ], while the current study indicated that the suppression of MAPK/PI3K pathways was attributed to destabilization of the KRas-CALM complex[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

No evidence text available

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sparser
"In addition, KRAS has been shown to bind to both RAF and CALM proteins at the same time and the binding of KRAS to CALM is independent from RAF [ xref ]."
CALM1 phosphorylates KRAS.
5 |
CALM1 phosphorylates KRAS on serine. 5 / 5
5 |

No evidence text available

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CALM1 affects HP
| 14
| 14

sparser
"HP-CAM modification yields a positional isomer of APAP-modification on all cysteines and modified peptides were identified using the same criteria as APAP-modified peptides from database searching."

sparser
"In total, 1466 HP-CAM-modified proteins with 4554 distinct HP-CAM peptides were identified in the mouse control sample; and 1073 HP-CAM-modified proteins with 3599 distinct HP-CAM-peptides were found in the rat control sample."

sparser
"The resulting list of HP-CAM peptides was further filtered to include peptides of a select list of potential protein targets."

sparser
"MRM transitions of modified peptides were also monitored in adjacent fractions as those where they were detected in HP-CAM samples, since peptides can often elute in more than one fraction."

sparser
"APAP-treated and HP-CAM alkylated liver digests were analyzed by scheduled LC-MRM methods specific to each SPE fraction."

sparser
"LC-MRM peaks were integrated, and relative peak areas for each transition (transition/sum of all transitions) as well as retention times were compared with HP-CAM signals for the same peptide. xref shows a representative example of a confirmed target LC-MRM for a mouse CYP 2C29 peptide, found via data-dependent MS/MS and confirmed by MRM analyses."

sparser
"The mouse peptide specifically was a very long peptide with 33 residues and a charge state of 4+, making it quite difficult to screen for via LC-MRM without a corresponding signal in the HP-CAM reference sample."

sparser
"This large peptide was not easily amenable to MRM analysis due to the lack of significantly intense fragment ions, as well as no appropriate HP-CAM peptide for method optimisation."

sparser
"HP-CAM peptides were used to confirm which fractions to monitor for each modified peptide, as well as LC retention time and MS/MS fragmentation behavior, with relatively high signal intensity."

sparser
"An important caveat to the MRM method, however, is that method development is more time-consuming, and in the case of APAP-modified peptides for this study, the custom alkylation HP-CAM peptides were crucial for confirmation."
CALM1 affects ERVK-18
| 14
| 14

sparser
"The ethics application (ZJ‐2021‐1) was approved by the CAMSU Animal Care and Use Committee."

sparser
"Depdc5 floxed mice, originated from the HEPD0734_3_G10 ES clone, were provided by the CAM-SU GRC, Soochow University (Suzhou, China)."

sparser
"We then injected a mutant mouse ES cell obtained from the ES cell bank of CAM-SU, which contained a modified Fadd genome region to induce Fadd knockout."

sparser
"Six-month-old wild-type (WT) and hepcidin knockout ( Hep −/− ) male mice were obtained from the Cambridge-Soochow University Genome Resource Centre (CAM-SU GRC)."

sparser
"Female GPER-null mice were established from CAM-SU Genomic Resource Center (Suzhou, China), the gene information was provided in Table2 in Supplementary materials."

sparser
"Ttbk2 flox/flox mice were obtained from the Center for Animal Model, Soochow University (CAMSU GRC), originally generated by the EUCOMM project."

sparser
"REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Anti-RanGAP1 antibody [EPR3295] Abcam Cat#ab92360; RRID: AB_10564003 Anti-Sp7 / Osterix antibody Abcam Cat#ab209484; RRID: AB_2892207 Goat Anti-mouse I[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"This protocol was approved by the Animal Care and Use Committee of Cambridge-Suda Genomic Resource Center (CAM-SU) at Soochow University."

sparser
"Wild type (Wt) and hepcidin knockout (Hepc −/− ) mice were obtained from the Cambridge-Soochow University Genome Resource Centre (CAM-SU GRC)."

sparser
"On this basis, Ddx20 Gene Systemic Knockout Heterozygous Mice Ddx20 -KO First was constructed from the Cambridge-SU Genome Resource Center (CAM-SU GRC) at Soochow University."
CALM1 affects CM
| 14
CM binds CALM1. 10 / 14
| 14

sparser
"Furthermore, A2780 invasion rates showed no differences after culture with Mϕ-CM, Cis-Mϕ-CM, CAM-CM, and Cis-CAM-CM ( Fig. S1A )."

sparser
"This revealed that Cis-CAM-CM led to up-regulation of the mesenchymal markers N-cadherin and Snail, and down-regulation of the epithelial marker E-cadherin in A2780 cells, compared to CAM-CM ( Fig. 1 [MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"In addition, CCK-8 experiments revealed that CAM-CM significantly decreased the survival rates of ovarian cancer cells compared to fresh DMEM and Mϕ-CM, comfirming the anti-tumor effect of CAMs, where[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Moreover, CAM-CM caused significantly more apoptosis in ovarian cancer cells than in fresh DMEM and Mϕ-CM, as demonstrated by flow cytometry-detected increase of annexin V-positive cells."

sparser
"One possible problematic outcome of such dismissal is that patients, who already anticipate this negative response, may choose not to discuss their concurrent use of treatments with their HCP, and as such may assume the entire burden of managing the interactions of CM and CAM without any medical guidance, which puts them at a great health risk [ xref , xref ]."

sparser
"However, there were no significant differences in apoptosis rates between the ovarian cancer cells treated with CAM-CM and Cis-CAM-CM ( Fig. 2 D and E)."

sparser
"After culture of A2780 in DMEM, CAM-CM, and Cis-CAM-CM, there were no significant differences in the 50% inhibitory concentration (IC50) of cisplatin ( Fig. 2 F), similar to the result in SKOV3 cells [MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"To explore the potential mechanism by which cisplatin-stimulated CAMs promote ovarian cancer cell migration, luminex liquid suspension chip detection was adopted to compare the differential expression[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Next, we used anti-CCL20 neutralizing antibody to block the effect of CCL20 in CAM-CM and Cis-CAM-CM, and found that the migration rate of cancer cells remained unchanged after neutralizing CCL20 in C[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"This revealed IL-1β, CCL20, CX3CL1, CXCL2, CXCL1, and MIF as the six most highly upregulated proteins in Cis-CAM-CM compared to levels in CAM-CM ( Fig. 3 A)."
Dlb affects CALM1
| 13
| 13

sparser
"Blue colonies expressing the lacZ β-galactosidase were observed and selected on LB-CAM plates including X-gal and IPTG."

sparser
"Thereafter, to induce the production of I- Sce I, 1 ml pre-warmed LB-Cam medium + 2% arabinose was added to the culture followed by 1 h incubation at 32 °C and 220 rpm."

sparser
"Transformed cells were spread on LB-Cam agar, and after 16 h at 30 °C, the resulting lawn of colonies was recovered."

sparser
"After 2–3 h incubation at 32 °C in a shaker incubator, the cells were screened on a LB-Cam agar plate supplemented with 1% arabinose."

sparser
"The recovered cells of the epPCR library were regrown in LB-Cam to mid-log phase, washed in 1× Vogel–Bonner salts and plated on the minimal selection medium containing 50 μM IPTG and Cam."

sparser
"35 After 48 h of incubation at 30 °C, the 40 fastest-growing colonies were used to inoculate the LB-Cam medium (120 μL) and grown to saturation."

sparser
"Cells were transformed with pCA24N- purF(1–04) plasmid DNA and used to inoculate an LB-Cam culture (40 mL) directly."

sparser
"Dilutions plated on LB-Cam indicated that the initial inoculum was ∼ 60 transformants."

sparser
"After 24 h of growth at 30 °C, the four largest colonies were picked, grown in LB-Cam and, in the case of variant purF(2–02) , sequenced using the primers pCA24N.for, pCA24N.rev2, pUC rev + 120, purF.[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"In each case, a single colony was used to inoculate LB-Cam (400 μL) and grown to saturation."
| 13

sparser
"Experimentally, capsid disruption in the presence of CAM-As proceeds over hours to days even at high small-molecule concentrations, [ xref ] consistent with the metastable character of CAM-bound capsids observed here on the microsecond timescale."

sparser
"All-atom models of intact, CAM-bound HBV Cp149 capsids were prepared based on crystal structures of pre-formed capsids complexed with AT130 (PDB 4G93, 4.2 Å), [ xref ] HAP1 (PDB 2G34, 5.0 Å), [ xref ] and HAP18 (PDB 5D7Y, 3.9 Å). [ xref ] The AT130- and HAP18-bound capsid models contain CAMs in all B and C sites and are referred to as saturated."

sparser
"The results showed that in HepAD38 and HepG2-HBV1.3 cells, only C-39 and the known type I CAM BAY 41-4109 dramatically inhibited capsid formation, while ETV and the other eight compounds showed much less or no inhibition effects ( xref C)."

sparser
"MD results suggest that the first CAM molecule is most likely to bind the intact capsid in a B site, and that B site occupancy can increase the accessibility of adjacent C sites, indicating potential positive cooperativity during CAM uptake."

sparser
"Figure  xref shows the residue-specific chemical-shift differences between the apo and CAM-bound capsids for the different compounds plotted on the Cp dimer 3D structure (PDB 5d7y xref ) (for chemical-shift perturbations (CSPs) see Supplementary Fig.  xref )."

sparser
"These are not only academic questions as they also relate to the interpretation of capsid-CAM interactions in vivo."
| PMC

sparser
"The CAM (-N), leading to the formation of morphologically normal capsids and the CAM (-A), leading to aberrant HBV capsid structures."

sparser
"Interestingly,dimer pair dynamics in the HAP1-bound case are more similar to the AT130-bound than any other system, despite the fact that these represent the most and least faceted CAM-bound capsids, respectively."

sparser
"Interestingly, CAM binding of assembled capsids induces significant structural changes in the HAP pocket and triggers overall and global structural alterations in Cp dimer, tetramer and capsids."

sparser
"Compared to a cryo-EM analysis of CAM-bound capsids that mostly revealed that CAM induced Cp tertiary and quaternary structural changes, the crystallography of CpY132A heximers revealed a more detailed interaction of the CAM molecule with amino acid residues of Cp at the HAP pocket due to an improved resolution [ xref , xref ]."
TNF affects CALM1
| 8 5
TNF increases the amount of CALM1.
| 5 5
TNF increases the amount of CALM1. 10 / 10
| 5 5

sparser
"Of note, our in vitro experiments suggest a direct inhibitory effect of GCSF on TNFα-induced endothelial CAM expression."

sparser
"Weber et al. investigated the impact of xenon and other anaesthetics on TNFα-induced endothelial CAM expression."

reach
"Node et al. reported that EETs are potent inhibitors of CAM expression induced by TNF-alpha, IL-1alpha and bacterial lipopolysaccharide 4."

reach
"However, cGMP analogs have also been shown not to interfere with CAM expression induced by TNF-alpha [38] or other cytokines in human saphenous vein endothelial cells [39] or by IL-1beta in HUVEC [40][MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

reach
"In cultured endothelial cells, HDL suppresses CAM expression induced by the pro inflammatory cytokine TNF-alpha [58], possibly by interfering with the sphingosine kinase pathway involved in cytokine induced NF-kappaB activation [59]."

sparser
"The effect of flow on the TNFα-induced CAM expression was also studied under the same conditions, with TNFα added for the last 5 h."

reach
"Induction of CAM expression by IL-1beta or TNF-alpha was consistent with other reports [19,20], while positive controls established that this expression was subject to downregulation; addition of the [MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"In cultured endothelial cells, HDL suppresses CAM expression induced by the pro-inflammatory cytokine TNF-α [58], possibly by interfering with the sphingosine kinase pathway involved in cytokine-induced NF-κB activation [59]."

sparser
"Indeed, our current data show that blockage of NF-κB activity by stereocalpin A would impair the TNF-α-induced CAM expression."

reach
"Moreover, sitosterol inhibited NF-κB and suppressed the expression of CAM-1 and ICAM-1 stimulated by TNF-α [50]."
TNF activates CALM1.
| 3
TNF activates CALM1. 3 / 3
| 3

reach
"However, TNF does not simply cause upregula- tion of all CAM : in some cases, instead of an increase in surface expression, it triggers a change in confor- mational structure and/or affinity state."

reach
"TNF-alpha significantly induced CAM mRNA in HUVEC."

reach
"TNFalpha induced a ~ 2-3-fold increase in sI-CAM1 release in both donors at the 18 and 24 h time points compared to the untreated controls."
SVA affects CALM1
| 13
| 13

sparser
"Surgeons should consider obtaining global sagittal alignment radiographs in high-risk patients, particularly elderly individuals or those with evident postural abnormalities, as the CAM-SVA measurement provides valuable prognostic information that can inform patient counseling and surgical planning [ xref ]."

sparser
"This study demonstrated that larger preoperative CAM-SVA values and advanced age independently predict KFC progression following TKA."

sparser
"SVA-C7, SVA-C2, SVA-CAM were larger in males and high PI, and increased significantly after 50 years (Pr>0.9999)."

sparser
"Univariate analysis identified advanced age, preoperative KFC, increased CAM-SVA, and increased SVA as significant predictors of KFC progression (all p < 0.01)."

sparser
"This study was conducted to investigate whether preoperative global sagittal alignment parameters, particularly the center of the acoustic meatus-sagittal vertical axis (CAM-SVA), could predict short-term KFC progression after TKA."

sparser
"In the multivariate logistic regression model (Table  xref ), only CAM-SVA (OR, 1.02; 95% CI 1.01–1.04; p < 0.05) and age (OR, 1.09; 95% CI 1.02–1.17; p < 0.01) remained as independent predictors."

sparser
"Multivariate analysis revealed that CAM-SVA and age were independently associated with KFC progression (odds ratio: 1.02 [95% CI 1.01–1.04], p < 0.05; and 1.09 [95% CI 1.02–1.17], p < 0.01, respectively)."

sparser
"This study identified CAM-SVA and age as independent predictors of KFC progression following TKA."

sparser
"CAM-SVA and advanced age were identified as independent predictors of KFC progression following TKA, supporting the hypothesis that global sagittal malalignment contributes to compensatory knee flexion through biomechanical interdependence of the knee–hip–spine kinetic chain."

sparser
"Each millimeter increase in CAM-SVA was associated with a 2% increased odds of progression, while each year of age conferred a 9% increased risk."
PPP3CA affects CALM1
1 2 | 8 2
1 2 | 8 2

reach
"We found that endogenous CNA-CALM2 interaction requires KIF1Bbeta, which acts as a scaffold to potentiate and stabilize the CNA and CALM2 complex."

reach
"We conclude that KIF1Bbeta acts as a direct scaffold for CALM2 and CNA, facilitating the formation and stabilization of the CALM2 and CNA complex, relieving CNA autoinhibition, and thus enabling full [MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

reach
"Moreover, KIF1Bbeta induced co-precipitation of DRP1, in contrast to non transduced cells where DRP1 failed to co-precipitate with the CALM2 and CNA complex."

reach
"We infer that KIF1Bbeta might stabilize the CNA and CALM2 complex and is potentially required for CNA substrate recognition."

No evidence text available

reach
"We conclude that KIF1Bbeta is required for CNA-CALM2 association and enables DRP1 substrate recognition.We considered the possibility that KIF1Bbeta might potentiate CNA-CALM2 binding by affecting int[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Both CALM1 and PPP3CA play essential roles in the transduction of intracellular Ca(2+)-mediated signals, in that CALM1 encodes calcium binding protein which is a subunits of phosphorylase kinase and can bind PPP3CA regulatory domain and causes a conformational change in removing PPP3CA autoinhibitory domain from its catalytic site, i.e., activating PPP3CA ( xref )."

reach
"In contrast, addition of wild-type Flag-KIF1Bbeta or Flag-KIF1Bbeta600-1400 drastically enhanced S 35 CNA binding to DRP1 peptide and enabled co-precipitation of CALM2 and Flag-KIF1Bbeta, indicating t[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

"Calcium-bound calmodulin associates with calcineurin (cn), releasing the phosphatase from the repressive effects on an autoinhibitory domain."

reach
"We considered the possibility that KIF1Bbeta might enhance CNA-CALM2 binding by affecting the intracellular Ca 2+ concentration, since CNA binds CALM2 with higher affinity in Ca 2+ -saturated conditio[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
Keratins affects CALM1
| 13

sparser
"Malignant spindle cells tested negative for Pan-cytokeratin (CK), CK-CAM5.2, STAT6, CD34, S100, HMB45, and SOX10."

sparser
"Regarding intermediate filament panels, both jejunal and peritoneal tumors expressed vimentin, CK-AE1/AE3, CK-CAM5.2, and CK7."

sparser
"From an immunohistochemical point of view, EMPSGC is usually positive for Cytokeratin 7 (CK7), CK8, CK8/18, CKAE1/AE3, CK-CAM5.2, Epithelial Membrane Antigen (EMA), Gross Cystic Disease Fluid Protein-15 (GCDFP-15), WT1, Estrogen Receptor (ER), and Progesterone Receptor (PgR), but it is very important to underline the positivity for Synaptophysin (Syn) and/or Chromogranin A (CgA), Neuron-Specific Enolase (NSE), and CD56 [ xref , xref , xref ], which are markers of neuroendocrine differentiation."

sparser
"In terms of immunohistochemistry, MCC cells are positive for epithelial markers such as CK-CAM5.2, CKAE1-AE3, CK20, CK34BetaE12, BerEP4, and Epithelial membrane Antigen (EMA), PIEZO2 [ xref ], with some cases showing positivity for CK7 along with markers of neuroendocrine differentiation including chromogranin A (CgA), synaptophysin (Syn), and CD56 (NCAM1)."

sparser
"Immunohistochemically, tumor cells were negative for almost all markers such as CK‐AE1/AE3, CKCAM5.2, EMA, calretinin, desmin, α‐SMA, D2‐40, CD34, S‐100, and neurofilament."

sparser
"Immunohistochemistry shows staining of tumor cells with antibodies against smooth muscle actin, vimentin, S-100, epithelial membrane antigen, p63, BER-EP4, and CK-CAM 5.2.[ xref ]"

sparser
"The small round cells were positive for CK-CAM5.2, cytokeratin 8/18, ERG, and CD31, and negative for HHV-8, SOX-10, TTF-1, S-100, GATA-3, p40, CK5/6, napsin A, with retained SDHB and SMARCA4 expression."

sparser
"Moreover, immunohistochemical (IHC) analysis showed negativity for epithelial markers, such as Cytokeratin AE1/AE3, CK7, CK-CAM5.2, CK5/6, p40 and TTF1; therefore, further immunohistochemical markers were evaluated, and the conclusive diagnosis was based on a diffuse speckled nuclear positivity for NUT1 (clone C52B1)."

sparser
"Of all the reviewed immunohistochemical stains, cytokeratins (CK-PAN, CK-CAM, CK7) were the most represented: 39 of 60 cases (65%) had diffuse immunohistochemical staining to at least one of the cytokeratins, while the remaining 21 cases (35%) had focal or mild positivity for one of them."

sparser
"Most epithelial cells stained positive with the K903 mAb which binds high molecular weight cytokeratins (CK5 and CK14) as well as with Cam 5.2 mAb which binds low molecular weight CK (CK8 and 18) and [MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
FMN1 affects CALM1
| 13
| 13

sparser
"The results showed the conservation of 2 to 5 domains, characterized by the presence of STKc_CAMK, a calmodulin-like domain (CAM-LD), and EF-hands."

sparser
"Specifically, the CAM-LD directly binds calcium, inducing intramolecular conformational changes that result in calcium-specific activation of the catalytic domain [ xref ]."

sparser
"Additionally, CDPKs possess a bipartite nuclear localization signal sequence as a subdomain in their JD, which indicates the absence of consensus binding sites in their respective CAM-LD [ xref , xref , xref ]."

sparser
"Lane Detection with Convolutional Attention Mechanism (LD-CAM) model is proposed to achieve this outcome."

sparser
"Proposed LD-CAM Architecture for Lane Detection."

sparser
"An LD-CAM architecture for lane detection in unstructured roads is proposed in this work."

sparser
"The pre-processed image is then fed to LD-CAM architecture which consists of an encoder, Enhanced Convolutional Block Attention modules (E-CBAM), and a decoder."

sparser
"Figure  xref depicts the general framework of proposed LD-CAM Architecture."

sparser
"Significant findings are shown by comparing the performance of several models, such as U-net, Encoder-decoder SegNet VGG16, SCNN Unet Light ConvGRU, SCNN Unet Light ConvLSTM, SHPDAN (Spatial Hierarchical Dilated Attention Network) and the proposed LD-CAM architecture."

sparser
"Nevertheless, with an accuracy of 97.90%, precision of 98.92%, recall of 98.8%, and an F1 score of 97.70%, the proposed LD-CAM architecture performs better than the other existing models."
Clathrin affects CALM1
| 2 11
| 2 8

sparser
"In vitro studies together with work in non-neuronal cells demonstrated that CALM potently binds to clathrin via a series of degenerate motifs."

reach
"AP180 (and the related protein CALM) binds directly to clathrin but also contains a copy of the epsin amino-terminal homology (ENTH) domain [35]."

sparser
"The CALM protein binds clathrin and regulates clathrin-mediated endocytosis through its ability to regulate the orderly progression of clathrin-coat formation ( xref ; xref )."

sparser
"Previous studies have shown that SMAPs interact with clathrin and CALM, modulating clathrin-coated vesicle formation on the TGN ( xref ; xref ; xref )."

sparser
"Clathrin-CALM interaction seems to be regulated by multiple contact interfaces."

reach
"Both AP180 and CALM bind AP-2 and clathrin."

sparser
"C-terminal fragments approximating the AD, human CALM 414-652 [ xref ] or 256-652 [ xref ], can bind clathrin similar to the full length sequence, but sequences with a truncated C-terminus, i.e. , 1-413, 414-613 [ xref ] or 256-583 [ xref ] bind clathrin poorly."

sparser
"Thus, the entire AD is required for efficient clathrin binding by CALM in vitro and in vivo ."

sparser
"To examine the interaction of truncated CALM with clathrin, we cloned CALM ending at breakpoint 1926 or breakpoint 2091, with or without exon 13, which encodes a DPF motif that binds the endocytic adaptor AP2."

sparser
"Interestingly, however, endocytosis may be more efficient when targeting multiple receptors associated with CAM-mediated and clathrin-mediated endocytosis, rather than targeting multiple receptors associated solely with CAM-mediated endocytosis."
AP180 binds CALM1 and Clathrin. 3 / 3
| 3

sparser
"However, both AP180 and CALM S1&2 mutants did not bind clathrin significantly different to the non-specific binding of GST alone, whereas Site 1 alone was significantly different to GST alone for both AP180 ( P < 0.01) and CALM ( P < 0.001)."

sparser
"The above experiments demonstrated that Site 1, in particular, has a large effect on the interaction of clathrin with AP180 or CALM."

sparser
"Despite that AP180 and CALM are highly abundant components in their respective CME roles, there is no similarly detailed mechanism of AP180 or CALM binding to clathrin, as there is with AP2."
CALM1 affects dlb
| 13
| 13

sparser
"Blue colonies expressing the lacZ β-galactosidase were observed and selected on LB-CAM plates including X-gal and IPTG."

sparser
"Thereafter, to induce the production of I- Sce I, 1 ml pre-warmed LB-Cam medium + 2% arabinose was added to the culture followed by 1 h incubation at 32 °C and 220 rpm."

sparser
"Transformed cells were spread on LB-Cam agar, and after 16 h at 30 °C, the resulting lawn of colonies was recovered."

sparser
"After 2–3 h incubation at 32 °C in a shaker incubator, the cells were screened on a LB-Cam agar plate supplemented with 1% arabinose."

sparser
"The recovered cells of the epPCR library were regrown in LB-Cam to mid-log phase, washed in 1× Vogel–Bonner salts and plated on the minimal selection medium containing 50 μM IPTG and Cam."

sparser
"35 After 48 h of incubation at 30 °C, the 40 fastest-growing colonies were used to inoculate the LB-Cam medium (120 μL) and grown to saturation."

sparser
"Cells were transformed with pCA24N- purF(1–04) plasmid DNA and used to inoculate an LB-Cam culture (40 mL) directly."

sparser
"Dilutions plated on LB-Cam indicated that the initial inoculum was ∼ 60 transformants."

sparser
"After 24 h of growth at 30 °C, the four largest colonies were picked, grown in LB-Cam and, in the case of variant purF(2–02) , sequenced using the primers pCA24N.for, pCA24N.rev2, pUC rev + 120, purF.[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"In each case, a single colony was used to inoculate LB-Cam (400 μL) and grown to saturation."
| 13

sparser
"Experimentally, capsid disruption in the presence of CAM-As proceeds over hours to days even at high small-molecule concentrations, [ xref ] consistent with the metastable character of CAM-bound capsids observed here on the microsecond timescale."

sparser
"All-atom models of intact, CAM-bound HBV Cp149 capsids were prepared based on crystal structures of pre-formed capsids complexed with AT130 (PDB 4G93, 4.2 Å), [ xref ] HAP1 (PDB 2G34, 5.0 Å), [ xref ] and HAP18 (PDB 5D7Y, 3.9 Å). [ xref ] The AT130- and HAP18-bound capsid models contain CAMs in all B and C sites and are referred to as saturated."

sparser
"The results showed that in HepAD38 and HepG2-HBV1.3 cells, only C-39 and the known type I CAM BAY 41-4109 dramatically inhibited capsid formation, while ETV and the other eight compounds showed much less or no inhibition effects ( xref C)."

sparser
"MD results suggest that the first CAM molecule is most likely to bind the intact capsid in a B site, and that B site occupancy can increase the accessibility of adjacent C sites, indicating potential positive cooperativity during CAM uptake."

sparser
"Figure  xref shows the residue-specific chemical-shift differences between the apo and CAM-bound capsids for the different compounds plotted on the Cp dimer 3D structure (PDB 5d7y xref ) (for chemical-shift perturbations (CSPs) see Supplementary Fig.  xref )."

sparser
"These are not only academic questions as they also relate to the interpretation of capsid-CAM interactions in vivo."
| PMC

sparser
"The CAM (-N), leading to the formation of morphologically normal capsids and the CAM (-A), leading to aberrant HBV capsid structures."

sparser
"Interestingly,dimer pair dynamics in the HAP1-bound case are more similar to the AT130-bound than any other system, despite the fact that these represent the most and least faceted CAM-bound capsids, respectively."

sparser
"Interestingly, CAM binding of assembled capsids induces significant structural changes in the HAP pocket and triggers overall and global structural alterations in Cp dimer, tetramer and capsids."

sparser
"Compared to a cryo-EM analysis of CAM-bound capsids that mostly revealed that CAM induced Cp tertiary and quaternary structural changes, the crystallography of CpY132A heximers revealed a more detailed interaction of the CAM molecule with amino acid residues of Cp at the HAP pocket due to an improved resolution [ xref , xref ]."
CALM1 affects SVA
| 13
| 13

sparser
"Surgeons should consider obtaining global sagittal alignment radiographs in high-risk patients, particularly elderly individuals or those with evident postural abnormalities, as the CAM-SVA measurement provides valuable prognostic information that can inform patient counseling and surgical planning [ xref ]."

sparser
"This study demonstrated that larger preoperative CAM-SVA values and advanced age independently predict KFC progression following TKA."

sparser
"SVA-C7, SVA-C2, SVA-CAM were larger in males and high PI, and increased significantly after 50 years (Pr>0.9999)."

sparser
"Univariate analysis identified advanced age, preoperative KFC, increased CAM-SVA, and increased SVA as significant predictors of KFC progression (all p < 0.01)."

sparser
"This study was conducted to investigate whether preoperative global sagittal alignment parameters, particularly the center of the acoustic meatus-sagittal vertical axis (CAM-SVA), could predict short-term KFC progression after TKA."

sparser
"In the multivariate logistic regression model (Table  xref ), only CAM-SVA (OR, 1.02; 95% CI 1.01–1.04; p < 0.05) and age (OR, 1.09; 95% CI 1.02–1.17; p < 0.01) remained as independent predictors."

sparser
"Multivariate analysis revealed that CAM-SVA and age were independently associated with KFC progression (odds ratio: 1.02 [95% CI 1.01–1.04], p < 0.05; and 1.09 [95% CI 1.02–1.17], p < 0.01, respectively)."

sparser
"This study identified CAM-SVA and age as independent predictors of KFC progression following TKA."

sparser
"CAM-SVA and advanced age were identified as independent predictors of KFC progression following TKA, supporting the hypothesis that global sagittal malalignment contributes to compensatory knee flexion through biomechanical interdependence of the knee–hip–spine kinetic chain."

sparser
"Each millimeter increase in CAM-SVA was associated with a 2% increased odds of progression, while each year of age conferred a 9% increased risk."
CALM1 affects Keratins
| 13

sparser
"Malignant spindle cells tested negative for Pan-cytokeratin (CK), CK-CAM5.2, STAT6, CD34, S100, HMB45, and SOX10."

sparser
"Regarding intermediate filament panels, both jejunal and peritoneal tumors expressed vimentin, CK-AE1/AE3, CK-CAM5.2, and CK7."

sparser
"From an immunohistochemical point of view, EMPSGC is usually positive for Cytokeratin 7 (CK7), CK8, CK8/18, CKAE1/AE3, CK-CAM5.2, Epithelial Membrane Antigen (EMA), Gross Cystic Disease Fluid Protein-15 (GCDFP-15), WT1, Estrogen Receptor (ER), and Progesterone Receptor (PgR), but it is very important to underline the positivity for Synaptophysin (Syn) and/or Chromogranin A (CgA), Neuron-Specific Enolase (NSE), and CD56 [ xref , xref , xref ], which are markers of neuroendocrine differentiation."

sparser
"In terms of immunohistochemistry, MCC cells are positive for epithelial markers such as CK-CAM5.2, CKAE1-AE3, CK20, CK34BetaE12, BerEP4, and Epithelial membrane Antigen (EMA), PIEZO2 [ xref ], with some cases showing positivity for CK7 along with markers of neuroendocrine differentiation including chromogranin A (CgA), synaptophysin (Syn), and CD56 (NCAM1)."

sparser
"Immunohistochemically, tumor cells were negative for almost all markers such as CK‐AE1/AE3, CKCAM5.2, EMA, calretinin, desmin, α‐SMA, D2‐40, CD34, S‐100, and neurofilament."

sparser
"Immunohistochemistry shows staining of tumor cells with antibodies against smooth muscle actin, vimentin, S-100, epithelial membrane antigen, p63, BER-EP4, and CK-CAM 5.2.[ xref ]"

sparser
"The small round cells were positive for CK-CAM5.2, cytokeratin 8/18, ERG, and CD31, and negative for HHV-8, SOX-10, TTF-1, S-100, GATA-3, p40, CK5/6, napsin A, with retained SDHB and SMARCA4 expression."

sparser
"Moreover, immunohistochemical (IHC) analysis showed negativity for epithelial markers, such as Cytokeratin AE1/AE3, CK7, CK-CAM5.2, CK5/6, p40 and TTF1; therefore, further immunohistochemical markers were evaluated, and the conclusive diagnosis was based on a diffuse speckled nuclear positivity for NUT1 (clone C52B1)."

sparser
"Of all the reviewed immunohistochemical stains, cytokeratins (CK-PAN, CK-CAM, CK7) were the most represented: 39 of 60 cases (65%) had diffuse immunohistochemical staining to at least one of the cytokeratins, while the remaining 21 cases (35%) had focal or mild positivity for one of them."

sparser
"Most epithelial cells stained positive with the K903 mAb which binds high molecular weight cytokeratins (CK5 and CK14) as well as with Cam 5.2 mAb which binds low molecular weight CK (CK8 and 18) and [MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
CALM1 affects FMN1
| 13
| 13

sparser
"The results showed the conservation of 2 to 5 domains, characterized by the presence of STKc_CAMK, a calmodulin-like domain (CAM-LD), and EF-hands."

sparser
"Specifically, the CAM-LD directly binds calcium, inducing intramolecular conformational changes that result in calcium-specific activation of the catalytic domain [ xref ]."

sparser
"Additionally, CDPKs possess a bipartite nuclear localization signal sequence as a subdomain in their JD, which indicates the absence of consensus binding sites in their respective CAM-LD [ xref , xref , xref ]."

sparser
"Lane Detection with Convolutional Attention Mechanism (LD-CAM) model is proposed to achieve this outcome."

sparser
"Proposed LD-CAM Architecture for Lane Detection."

sparser
"An LD-CAM architecture for lane detection in unstructured roads is proposed in this work."

sparser
"The pre-processed image is then fed to LD-CAM architecture which consists of an encoder, Enhanced Convolutional Block Attention modules (E-CBAM), and a decoder."

sparser
"Figure  xref depicts the general framework of proposed LD-CAM Architecture."

sparser
"Significant findings are shown by comparing the performance of several models, such as U-net, Encoder-decoder SegNet VGG16, SCNN Unet Light ConvGRU, SCNN Unet Light ConvLSTM, SHPDAN (Spatial Hierarchical Dilated Attention Network) and the proposed LD-CAM architecture."

sparser
"Nevertheless, with an accuracy of 97.90%, precision of 98.92%, recall of 98.8%, and an F1 score of 97.70%, the proposed LD-CAM architecture performs better than the other existing models."
CALM1 affects Clathrin
| 2 11
| 2 8

sparser
"In vitro studies together with work in non-neuronal cells demonstrated that CALM potently binds to clathrin via a series of degenerate motifs."

reach
"AP180 (and the related protein CALM) binds directly to clathrin but also contains a copy of the epsin amino-terminal homology (ENTH) domain [35]."

sparser
"The CALM protein binds clathrin and regulates clathrin-mediated endocytosis through its ability to regulate the orderly progression of clathrin-coat formation ( xref ; xref )."

sparser
"Previous studies have shown that SMAPs interact with clathrin and CALM, modulating clathrin-coated vesicle formation on the TGN ( xref ; xref ; xref )."

sparser
"Clathrin-CALM interaction seems to be regulated by multiple contact interfaces."

reach
"Both AP180 and CALM bind AP-2 and clathrin."

sparser
"C-terminal fragments approximating the AD, human CALM 414-652 [ xref ] or 256-652 [ xref ], can bind clathrin similar to the full length sequence, but sequences with a truncated C-terminus, i.e. , 1-413, 414-613 [ xref ] or 256-583 [ xref ] bind clathrin poorly."

sparser
"Thus, the entire AD is required for efficient clathrin binding by CALM in vitro and in vivo ."

sparser
"To examine the interaction of truncated CALM with clathrin, we cloned CALM ending at breakpoint 1926 or breakpoint 2091, with or without exon 13, which encodes a DPF motif that binds the endocytic adaptor AP2."

sparser
"Interestingly, however, endocytosis may be more efficient when targeting multiple receptors associated with CAM-mediated and clathrin-mediated endocytosis, rather than targeting multiple receptors associated solely with CAM-mediated endocytosis."
AP180 binds CALM1 and Clathrin. 3 / 3
| 3

sparser
"However, both AP180 and CALM S1&2 mutants did not bind clathrin significantly different to the non-specific binding of GST alone, whereas Site 1 alone was significantly different to GST alone for both AP180 ( P < 0.01) and CALM ( P < 0.001)."

sparser
"The above experiments demonstrated that Site 1, in particular, has a large effect on the interaction of clathrin with AP180 or CALM."

sparser
"Despite that AP180 and CALM are highly abundant components in their respective CME roles, there is no similarly detailed mechanism of AP180 or CALM binding to clathrin, as there is with AP2."
CALM1 affects AGP
| 13
CALM1 increases the amount of AGP.
| 8
CALM1 increases the amount of AGP. 8 / 8
| 8

reach
"CAM, erythromycin, troleandomycin, spiramycin, and josamycin, but not oleandomycin, increased serum AGP levels at a dose of 25 mg/kg/day for 3 days."

reach
"Finally, we examined the issue of whether the accumulation of AGP mRNA expression by CAM might be a result of transcript stability as well as of post-transcriptional regulation."

reach
"The AGP levels induced by CAM (25 mg/kg/day, for 7 days) was similar to the AGP levels in the rats with inflammation induced by turpentine oil (2 mL/kg, s.c.) (data not shown)."

reach
"As shown in Fig. 5, CAM did not increase serum AGP levels 4 days after administration in the adrenalectomized rats, although CAM increased serum AGP level in sham operated rats."

reach
"In support of this, CAM did not increase AGP levels in serum in adrenalectomized rats."

reach
"However, the issue of whether CAM increases the AGP level at transcriptional level or not remains unclear, because the method employed for the quantitation of AGP in serum is affected by alterations i[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

reach
"If not, does CAM increase AGP mRNA levels?"

reach
"It is possible that macrolides may up-regulate AGP gene expression by increasing the nuclear translocation of GR, although whether CAM increases the nuclear translocation of GR remains to be determine[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
CALM1 activates AGP.
| 5
CALM1 activates AGP. 5 / 5
| 5

reach
"Thus, to determine whether an increase of AGP by CAM is due to the change of AGP glycan heterogeneity, the effect of CAM on the oligosaccharide structure of AGP in serum were examined by Crossed affin[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

reach
"CAM dose-dependently increased AGP mRNA in liver 24 hr after administration."

reach
"To better understand the up-regulation of AGP by CAM, the following experiments were conducted in primary cultured rat hepatocytes."

reach
"We found that CAM may slightly increase the stability of AGP mRNA (t1/2 = 6.8 +/- 0.8 hr for control, t1/2 = 14.8 +/- 1.7 hr for CAM treated)."

reach
"Although CAM slightly increased the stability of AGP mRNA, we assumed that the main mechanism for the up-regulation of AGP mRNA is at the transcriptional activation level."
IQGAP1 affects CALM1
10 2 |
10 2 |

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CSNK2A1 affects CALM1
4 3 4 | 1
CSNK2A1 binds CALM1.
3 4 | 1
3 4 | 1

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sparser
"As indicted from the co-crystal structure of CK2α-CAM187, the biaryl part of this molecule fitted into the α/β interface."

No evidence text available

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CSNK2A1 inhibits CALM1.
4 |
4 |

"Phosphorylation of CaM at four sites by CK2 was found to follow a sequential order, with Ser81 as the first, Thr79 as the second, and Ser101 or Thr117 as the third. We found that in the complex between CaM and CaMKII, residue E115 of CaM is strongly interacting with K299 of the kinase through forming a salt-bridge (PDB entry 1WEL), it is quite likely that the phosphorylation induced structural change can disrupt this interaction and negatively affect the binding between the two proteins"

"Phosphorylation of CaM at four sites by CK2 was found to follow a sequential order, with Ser81 as the first, Thr79 as the second, and Ser101 or Thr117 as the third."

"Phosphorylation of CaM at four sites by CK2 was found to follow a sequential order, with Ser81 as the first, Thr79 as the second, and Ser101 or Thr117 as the third."

"Phosphorylation of CaM at four sites by CK2 was found to follow a sequential order, with Ser81 as the first, Thr79 as the second, and Ser101 or Thr117 as the third."
CALM3 affects CALM1
| 12
| 8

sparser
"CALM3 has now been associated with CPVT and both CALM1 and CALM3 mutations evoke arrhythmogenic Ca disturbances via ryanodine receptor 2 dysregulation [ xref ]."

sparser
"Several reports exist of mutations in the CALM1CALM3 genes, each encoding the ubiquitous Ca 2+ sensing protein calmodulin, in relation to LQTS and sinus bradycardia (Table xref and Table xref )."

sparser
"Although it is difficult to compare the frequencies of different hits directly due to differences in protein target abundance and efficiency of detection, these findings are consistent with CaM1 and CaM3 interacting with a number of apical complex proteins, including MyoH."

sparser
"In Table xref and Table xref , we, like others ( xref , xref ), used LQT14–LQT16 in relation to mutations in CALM1CALM3 ."

sparser
"The expression of calmodulin 1–3 (CALM1CALM3), ER chaperone calreticulin (CALR), calnexin (CANX), voltage gated calcium influx channel Cav1.2, calcium efflux channel plasma membrane Ca2+ ATPase (PMCA[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"CALM1‐3 encoded by three independent genes ( Calm1Calm3 ) express the identical calmodulin (CaM) proteins, [ xref ] which possess intracellular Ca 2+ ‐binding functions. [ xref ] To assess the exact binding site of alnustone on CaM, we carried out molecular docking."

sparser
"Interestingly, analysis of the STRING database () suggests that there is an interaction network involving Slc27a2, SCD, Lep, and Adipog, as well as between TRPV4 and its potential interacting partners Calm3 and Calm1."

sparser
"Ca 2+ acts as a second messenger and an early response factor in the heat stress response by binding to CAM1 and CAM3 and potentially influencing HSFA2 gene expression."
| 4

sparser
"Collectively, these findings indicate that CaM1, CaM2 and CaM3 interact with the molecular motor MyoH at the conoid, likely regulating its activity in a calcium-dependent manner."

sparser
"Mutations in human genes CALM1, CALM2, and CALM3 have been associated with life-threatening heart disorders, such as long QT syndrome (LQTS) and catecholaminergic polymorphic ventricular tachycardia."

sparser
"There are three CaM genes producing identical proteins [20] , which are all expressed in cardiac tissue and mutations in CALM1, CALM2 or CALM3 have been associated with potentially life-threatening a[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Recently, mutations in genes encoding the ubiquitous Ca 2+ sensing protein calmodulin (CaM), have been discovered as a novel genetic basis for congenital arrhythmia susceptibility. xref – xref At least 12 mostly de novo mutations have been discovered in CALM1, CALM2, and CALM3 associated with LQTS, CPVT or idiopathic ventricular fibrillation."
CALM1 affects IQGAP1
10 2 |
10 2 |

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CALM1 affects CALM3
| 12
| 8

sparser
"CALM3 has now been associated with CPVT and both CALM1 and CALM3 mutations evoke arrhythmogenic Ca disturbances via ryanodine receptor 2 dysregulation [ xref ]."

sparser
"Several reports exist of mutations in the CALM1CALM3 genes, each encoding the ubiquitous Ca 2+ sensing protein calmodulin, in relation to LQTS and sinus bradycardia (Table xref and Table xref )."

sparser
"Although it is difficult to compare the frequencies of different hits directly due to differences in protein target abundance and efficiency of detection, these findings are consistent with CaM1 and CaM3 interacting with a number of apical complex proteins, including MyoH."

sparser
"In Table xref and Table xref , we, like others ( xref , xref ), used LQT14–LQT16 in relation to mutations in CALM1CALM3 ."

sparser
"The expression of calmodulin 1–3 (CALM1CALM3), ER chaperone calreticulin (CALR), calnexin (CANX), voltage gated calcium influx channel Cav1.2, calcium efflux channel plasma membrane Ca2+ ATPase (PMCA[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"CALM1‐3 encoded by three independent genes ( Calm1Calm3 ) express the identical calmodulin (CaM) proteins, [ xref ] which possess intracellular Ca 2+ ‐binding functions. [ xref ] To assess the exact binding site of alnustone on CaM, we carried out molecular docking."

sparser
"Interestingly, analysis of the STRING database () suggests that there is an interaction network involving Slc27a2, SCD, Lep, and Adipog, as well as between TRPV4 and its potential interacting partners Calm3 and Calm1."

sparser
"Ca 2+ acts as a second messenger and an early response factor in the heat stress response by binding to CAM1 and CAM3 and potentially influencing HSFA2 gene expression."
| 4

sparser
"Collectively, these findings indicate that CaM1, CaM2 and CaM3 interact with the molecular motor MyoH at the conoid, likely regulating its activity in a calcium-dependent manner."

sparser
"Mutations in human genes CALM1, CALM2, and CALM3 have been associated with life-threatening heart disorders, such as long QT syndrome (LQTS) and catecholaminergic polymorphic ventricular tachycardia."

sparser
"There are three CaM genes producing identical proteins [20] , which are all expressed in cardiac tissue and mutations in CALM1, CALM2 or CALM3 have been associated with potentially life-threatening a[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Recently, mutations in genes encoding the ubiquitous Ca 2+ sensing protein calmodulin (CaM), have been discovered as a novel genetic basis for congenital arrhythmia susceptibility. xref – xref At least 12 mostly de novo mutations have been discovered in CALM1, CALM2, and CALM3 associated with LQTS, CPVT or idiopathic ventricular fibrillation."
CALM1 affects AURKA
| 12
| 12

sparser
"In order to achieve this, the region between nucleotides 7242 and 8082 of the CAM-70 H cDNA was replaced with the corresponding region of the AIK-C H gene using the restriction enzymes PacI and NdeI, [MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Similarly, the region between nucleotides 8082 and 9175 of the CAM H cDNA was replaced with the corresponding region of the AIK-C H gene using NdeI and SpeI, generating CAM-AIK H II cDNA."

sparser
"The chimeric CAM-AIK H I and II cDNA were cloned into the pME18S vector, generating pME-CAM-AIK H I and pME-CAM-AIK H II."

sparser
"CAM-AIK H I, in which region II originated from the CAM-70 H protein, was unable to induce any syncytia at this time point ( Fig. 5 B)."

sparser
"In CHO/SLAM cells, CAM-AIK H II induced syncytia to a similar extent as the AIK-C H protein at 24 h p."

sparser
"In CHO/CD46 cells, CAM-AIK H II, in which region II was derived from the AIK-C H protein, induced syncytium formation, although the extent was less than that induced by the AIK-C H protein ( Fig. 5 B)[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"CAM-AIK H I did not produce any syncytia at this time point ( Fig. 5 C)."

sparser
"Region I was also thought to play a role in the low CD46-dependent fusion-inducing ability of the CAM-70 H protein, given that the fusion-inducing ability of CAM-AIK H II in CHO/CD46 cells was observe[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Given that the fusion-inducing ability of the CAM H N455T mutant was still lower than that of CAM-AIK H II, it was expected that either G505 or E603 in addition to N455 could result in the lower CD46-[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"However, fusion-inducing ability of the CAM H N455T + E603G combination mutant was still lower than that of CAM-AIK H II ( Fig. 5 B)."
Nat affects CALM1
| 11
| 11

sparser
"The aim of CAM-NAt in this sense is to go beyond empiricism, transcending the nature/culture binomial, retrieving analogism, the ability to feel, and using the only thing that the market apparently cannot check as a strategy of resistance: transcendence."

sparser
"Due to this link and for practical reasons, in this article, I frequently mention CAM and NAt (CAM-NAt) as if they belong to a unique ensemble."

sparser
"As holism is one of the main features that most of the practices defined (by Western) alternative or New Age share, I also refer to CAM-NAt as holistic practices. Anthropology & Medicine 3 Several studies have found that middle-class women (Kligman 1998; Ross 2012; Woodhead 2007) are those who are most frequently drawn to CAM and NAt."

sparser
"To avoid the risk of rebuilding the logic of the system in the act of replacing it, it is necessary to see both the positive and the negative aspects of CAM-NAt in the West."

sparser
"You are the creator, you are God Many CAM-NAt practices assign not only great consideration but also great power to the individual (especially all practices involving the concept of energy)."

sparser
"For most of CAM-NAt practices, an imbalance of the energetic fluids is what generates the rise of pathological problems, and thus a harmony of energies is necessary to promote the healthy condition of the individual."

sparser
"While, on one hand, these represent a form of resistance to capitalist culture, on the other there is a risk that CAM-NAt could end up reinforcing capitalistic logic through the establishment of an ‘individualistic holism’."

sparser
"Both can help us to understand the role of CAM-NAt within the movement against certain features of biomedicine, as well as the capitalist system."

sparser
"For the purposes of magic and folk medicine rituals, belief was crucial for the triggering of certain mechanisms of symbolic effectiveness (Lévi-Strauss 1958), but we can note that following capitalist logic, as well as that of the CAM-NAt, is still indispensable."

sparser
"Through their experiences, it is possible to highlight the contradictions of CAM-NAt in the West."
TSC affects CALM1
| 11
| 11

sparser
"Treatment was given on predetermined days, in which the prepared matrix scaffolds were used as substrates for impregnation of AgNPs. xref The process includes the exposure of various synthesized scaffolds ( i.e. , CAM alone, uncapped-CAM, capped = TSC-CAM, PVP-CAM and PVA-CAM, SBD-CAM) which were allowed to react on alternate days with the wound area in order to initiate the inflammatory phase followed by the other phases."

sparser
"At the same time, excision wounds treated with uncapped-CAM after the 14 th day showed the presence of a minimal amount of collagen with regeneration and incomplete tissue regeneration, compared with CAM alone, PVA-CAM, PVP-CAM, TSC-CAM or SBD-CAM, as shown in the xref , xref and xref ."

sparser
"From xref , it is proven that the percentage wound contraction for uncapped-CAM was significantly lower than the values for SBD-CAM, TSC-CAM, PVP-CAM and PVA-CAM on all the respective (3 rd , 6 th , 9 th , 14 th and 20 th ) days, which may be due to the absence of surface coating or capping agents in the uncapped-CAM, which are responsible for nanoparticle stability and healing potential."

sparser
"As shown in xref , wounds treated with PVA-CAM showed a greater percentage wound contraction compared to PVP-CAM, TSC-CAM, SBD-CAM, uncapped-CAM, CAM alone or the control group."

sparser
"Histopathological analyses of the excision wound models in the control group (without treatment), CAM alone, uncapped-CAM, SBD-CAM, TSC-CAM, PVP-CAM and PVA-CAM on the 9 th and 14 th day after the excision wound injury are depicted using H & E and MT staining in xref , xref and xref ."

sparser
"Histopathological studies on treatment with PVA-CAM in the excision wound model showed a maximum amount of fibroblast presence and collagen regeneration after the 9 th day of the healing process, which was found to be comparatively more effective than CAM alone, uncapped-CAM, PVP-CAM, TSC-CAM or SBD-CAM that showed a minimal amount of fibroblast and collagen regeneration, with the presence of dense inflammation."

sparser
"Finally, PVA-AgNPs, PVP-AgNPs, TSC-AgNPs, uncapped-AgNPs and SBD-suspensions were incorporated into the formulated polymeric matrix to form PVA-AgNP impregnated CAM (PVA-CAM), PVP-AgNP impregnated CAM (PVP-CAM), TSC-AgNP impregnated CAM (TSC-CAM), uncapped-AgNP impregnated CAM (uncapped-CAM) and SBD-suspension impregnated CAM (SBD-CAM), respectively, and freeze dried for further analysis."

sparser
"Wound treatment with uncapped-CAM after the 9 th day of observation showed skin tissue with dense inflammation, an absence of fibroblast development and a very minimal amount of collagen regeneration, and was found to be comparatively less effective than CAM alone, PVA-CAM, PVP-CAM, TSC-CAM or SBD-CAM."

sparser
"Group I was treated as the control (no treatment), Group II was treated with CAM alone, Groups III, IV, V and VI were treated with uncapped-CAM, TSC-CAM, PVP-CAM and PVA-CAM, respectively."

sparser
"Although the percentage wound contraction for PVP-CAM, TSC-CAM and SBD-CAM was quite a bit higher than for uncapped-CAM and the control group, wounds treated with PVA-CAM show the maximum significant wound contraction ( p ≤ 0.001) efficiency due to their biocompatibility with wound tissue."
SAM affects CALM1
| 11
| 11

sparser
"The simpler spatial attention mechanism in SAM-CAM yields excellent results, suggesting that the model emphasized spatial features in the image data while relying on channel-based adjustments for indicators."

sparser
"All tests of SAM-CAM differences were replicated, as were the SAM-alcohol alone comparisons for the infrequent SAM group."

sparser
"0056) for experiencing eight of the nine consequences, with the only exception that social and risk-related consequences did not differ for the SAM-CAM comparison only."

sparser
"The SAM-CAM configuration achieves the highest accuracy (92.76%), improving by 3.17% over CAM-CAM (the lowest accuracy)."

sparser
"SAM-CAM also outperforms other configurations in F1-score (0.8095), with an improvement of 0.0679 over CAM-CAM (0.7416, the lowest)."

sparser
"The SAM-to-CAM synapses were formed by a variety of swellings of the SAM neuritic trunk, containing clear, small vesicle-filled profiles synapsing onto clear postsynaptic profiles of the CAM twigs ( xref )."

sparser
"In contrast, the approach of using channel attention followed by spatial attention (CAM-SAM) offers distinct advantages compared to the serial connection of spatial attention followed by channel attention."

sparser
"xref compares ResNeXt50+IPAM (CAM-SAM in parallel) with the CAM and SAM of IPAM connected serially (CAM-SAM)."

sparser
"Overall, SAM-CAM delivers the best performance, highlighting the complementary roles of spatial features from RGB data and channel features from indicator data for Benggang classification."

sparser
"The combined CBAM ( xref ) dynamically learns both channel-wise and spatial attention distributions through the synergistic interaction of CAM and SAM, thereby improving feature extraction efficiency and network representational capacity, ultimately optimizing model performance ( xref , xref )."
CEBPB affects CALM1
| 11
| 11

sparser
"The negative charge of Lipoid E80 applied in this CAM-Lip formulation might, in combination with the positive charge of the CS-hydrogel, also cause an interaction between the polymer chains of the gel[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Drug release from different vehicles (CS-CAM, CS-CAM-Lip and CAM-Lip) and further permeation through the pig skin, were investigated using Franz diffusion cells (PermeGear, Bethlehem, USA) with a 5 ml[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"However, the CS-CAM-Lip only enhanced the penetration of CAM as compared to the CAM-Lip formulation (two-tailed t -test, p < 0.05), and showed a higher retention of CAM on the skin surface than the CS[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"The total drug recovery was found to be good and of the same magnitude for all the formulations; 95.37 ± 4.61%, 93.84 ± 3.27%, 96.52 ± 5.71 and 94.26 ± 5.39%, for the CAM-Sol, CAM-Lip, CS-CAM and CS-C[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"The observed sustained release from our CAM-Lip formulation could, however, according to Hurler et al. (2013) , theoretically have been increased by changing the lipid composition of the liposome carr[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"When comparing the amount of drug remaining on the skin surface after 8 h from the different formulations; 69.76 ± 4.83%, 55.29 ± 4.04%, 44.15 ± 5.50% and 48.86 ± 2.37%, for the CAM-Sol, CAM-Lip, CS-C[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"However, the negative charge of CAM-Lip could also influence the permeation of CAM through the pig skin, as mentioned in Section 3.1 ."

sparser
"It appears that all the test formulations (CAM-Lip, CS-CAM, CS-CAM-Lip), although acting as the penetration enhancers for CAM, also serve to increase the drug concentration in the skin."

sparser
"Based on the determined MIC-values ( Table 3 ), and the typically applied CAM concentrations in the marketed product, (0.5% or 1%), the CAM-Lip formulations were tested for their antibiotic activity a[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Only small differences between the diameter of the inhibition zones were observed between the CAM-Lip and CAM-Sol formulations ( Table 4 ), and only for the 750 mg/ml CAM-concentration samples, a sign[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
CALM1 affects nat
| 11
| 11

sparser
"The aim of CAM-NAt in this sense is to go beyond empiricism, transcending the nature/culture binomial, retrieving analogism, the ability to feel, and using the only thing that the market apparently cannot check as a strategy of resistance: transcendence."

sparser
"Due to this link and for practical reasons, in this article, I frequently mention CAM and NAt (CAM-NAt) as if they belong to a unique ensemble."

sparser
"As holism is one of the main features that most of the practices defined (by Western) alternative or New Age share, I also refer to CAM-NAt as holistic practices. Anthropology & Medicine 3 Several studies have found that middle-class women (Kligman 1998; Ross 2012; Woodhead 2007) are those who are most frequently drawn to CAM and NAt."

sparser
"To avoid the risk of rebuilding the logic of the system in the act of replacing it, it is necessary to see both the positive and the negative aspects of CAM-NAt in the West."

sparser
"You are the creator, you are God Many CAM-NAt practices assign not only great consideration but also great power to the individual (especially all practices involving the concept of energy)."

sparser
"For most of CAM-NAt practices, an imbalance of the energetic fluids is what generates the rise of pathological problems, and thus a harmony of energies is necessary to promote the healthy condition of the individual."

sparser
"While, on one hand, these represent a form of resistance to capitalist culture, on the other there is a risk that CAM-NAt could end up reinforcing capitalistic logic through the establishment of an ‘individualistic holism’."

sparser
"Both can help us to understand the role of CAM-NAt within the movement against certain features of biomedicine, as well as the capitalist system."

sparser
"For the purposes of magic and folk medicine rituals, belief was crucial for the triggering of certain mechanisms of symbolic effectiveness (Lévi-Strauss 1958), but we can note that following capitalist logic, as well as that of the CAM-NAt, is still indispensable."

sparser
"Through their experiences, it is possible to highlight the contradictions of CAM-NAt in the West."
CALM1 affects TSC
| 11
| 11

sparser
"Treatment was given on predetermined days, in which the prepared matrix scaffolds were used as substrates for impregnation of AgNPs. xref The process includes the exposure of various synthesized scaffolds ( i.e. , CAM alone, uncapped-CAM, capped = TSC-CAM, PVP-CAM and PVA-CAM, SBD-CAM) which were allowed to react on alternate days with the wound area in order to initiate the inflammatory phase followed by the other phases."

sparser
"At the same time, excision wounds treated with uncapped-CAM after the 14 th day showed the presence of a minimal amount of collagen with regeneration and incomplete tissue regeneration, compared with CAM alone, PVA-CAM, PVP-CAM, TSC-CAM or SBD-CAM, as shown in the xref , xref and xref ."

sparser
"From xref , it is proven that the percentage wound contraction for uncapped-CAM was significantly lower than the values for SBD-CAM, TSC-CAM, PVP-CAM and PVA-CAM on all the respective (3 rd , 6 th , 9 th , 14 th and 20 th ) days, which may be due to the absence of surface coating or capping agents in the uncapped-CAM, which are responsible for nanoparticle stability and healing potential."

sparser
"As shown in xref , wounds treated with PVA-CAM showed a greater percentage wound contraction compared to PVP-CAM, TSC-CAM, SBD-CAM, uncapped-CAM, CAM alone or the control group."

sparser
"Histopathological analyses of the excision wound models in the control group (without treatment), CAM alone, uncapped-CAM, SBD-CAM, TSC-CAM, PVP-CAM and PVA-CAM on the 9 th and 14 th day after the excision wound injury are depicted using H & E and MT staining in xref , xref and xref ."

sparser
"Histopathological studies on treatment with PVA-CAM in the excision wound model showed a maximum amount of fibroblast presence and collagen regeneration after the 9 th day of the healing process, which was found to be comparatively more effective than CAM alone, uncapped-CAM, PVP-CAM, TSC-CAM or SBD-CAM that showed a minimal amount of fibroblast and collagen regeneration, with the presence of dense inflammation."

sparser
"Finally, PVA-AgNPs, PVP-AgNPs, TSC-AgNPs, uncapped-AgNPs and SBD-suspensions were incorporated into the formulated polymeric matrix to form PVA-AgNP impregnated CAM (PVA-CAM), PVP-AgNP impregnated CAM (PVP-CAM), TSC-AgNP impregnated CAM (TSC-CAM), uncapped-AgNP impregnated CAM (uncapped-CAM) and SBD-suspension impregnated CAM (SBD-CAM), respectively, and freeze dried for further analysis."

sparser
"Wound treatment with uncapped-CAM after the 9 th day of observation showed skin tissue with dense inflammation, an absence of fibroblast development and a very minimal amount of collagen regeneration, and was found to be comparatively less effective than CAM alone, PVA-CAM, PVP-CAM, TSC-CAM or SBD-CAM."

sparser
"Group I was treated as the control (no treatment), Group II was treated with CAM alone, Groups III, IV, V and VI were treated with uncapped-CAM, TSC-CAM, PVP-CAM and PVA-CAM, respectively."

sparser
"Although the percentage wound contraction for PVP-CAM, TSC-CAM and SBD-CAM was quite a bit higher than for uncapped-CAM and the control group, wounds treated with PVA-CAM show the maximum significant wound contraction ( p ≤ 0.001) efficiency due to their biocompatibility with wound tissue."
CALM1 affects SAM
| 11
| 11

sparser
"The simpler spatial attention mechanism in SAM-CAM yields excellent results, suggesting that the model emphasized spatial features in the image data while relying on channel-based adjustments for indicators."

sparser
"All tests of SAM-CAM differences were replicated, as were the SAM-alcohol alone comparisons for the infrequent SAM group."

sparser
"0056) for experiencing eight of the nine consequences, with the only exception that social and risk-related consequences did not differ for the SAM-CAM comparison only."

sparser
"The SAM-CAM configuration achieves the highest accuracy (92.76%), improving by 3.17% over CAM-CAM (the lowest accuracy)."

sparser
"SAM-CAM also outperforms other configurations in F1-score (0.8095), with an improvement of 0.0679 over CAM-CAM (0.7416, the lowest)."

sparser
"The SAM-to-CAM synapses were formed by a variety of swellings of the SAM neuritic trunk, containing clear, small vesicle-filled profiles synapsing onto clear postsynaptic profiles of the CAM twigs ( xref )."

sparser
"In contrast, the approach of using channel attention followed by spatial attention (CAM-SAM) offers distinct advantages compared to the serial connection of spatial attention followed by channel attention."

sparser
"xref compares ResNeXt50+IPAM (CAM-SAM in parallel) with the CAM and SAM of IPAM connected serially (CAM-SAM)."

sparser
"Overall, SAM-CAM delivers the best performance, highlighting the complementary roles of spatial features from RGB data and channel features from indicator data for Benggang classification."

sparser
"The combined CBAM ( xref ) dynamically learns both channel-wise and spatial attention distributions through the synergistic interaction of CAM and SAM, thereby improving feature extraction efficiency and network representational capacity, ultimately optimizing model performance ( xref , xref )."
CALM1 affects EGFR
7 1 | 3
7 1 | 3

No evidence text available

No evidence text available

No evidence text available

No evidence text available

No evidence text available

sparser
"Huang et al. [ xref ] obtained the first experimental evidence for CALM binding to the EGFR in a Ca 2+ -dependent manner in rat liver."

No evidence text available

No evidence text available

No evidence text available

sparser
"Over-expressed CALM1 and EGFR were significantly associated with clinical stage, T classification and poor overall prognosis, respectively."
CALM1 affects CEBPB
| 11
| 11

sparser
"The negative charge of Lipoid E80 applied in this CAM-Lip formulation might, in combination with the positive charge of the CS-hydrogel, also cause an interaction between the polymer chains of the gel[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Drug release from different vehicles (CS-CAM, CS-CAM-Lip and CAM-Lip) and further permeation through the pig skin, were investigated using Franz diffusion cells (PermeGear, Bethlehem, USA) with a 5 ml[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"However, the CS-CAM-Lip only enhanced the penetration of CAM as compared to the CAM-Lip formulation (two-tailed t -test, p < 0.05), and showed a higher retention of CAM on the skin surface than the CS[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"The total drug recovery was found to be good and of the same magnitude for all the formulations; 95.37 ± 4.61%, 93.84 ± 3.27%, 96.52 ± 5.71 and 94.26 ± 5.39%, for the CAM-Sol, CAM-Lip, CS-CAM and CS-C[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"The observed sustained release from our CAM-Lip formulation could, however, according to Hurler et al. (2013) , theoretically have been increased by changing the lipid composition of the liposome carr[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"When comparing the amount of drug remaining on the skin surface after 8 h from the different formulations; 69.76 ± 4.83%, 55.29 ± 4.04%, 44.15 ± 5.50% and 48.86 ± 2.37%, for the CAM-Sol, CAM-Lip, CS-C[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"However, the negative charge of CAM-Lip could also influence the permeation of CAM through the pig skin, as mentioned in Section 3.1 ."

sparser
"It appears that all the test formulations (CAM-Lip, CS-CAM, CS-CAM-Lip), although acting as the penetration enhancers for CAM, also serve to increase the drug concentration in the skin."

sparser
"Based on the determined MIC-values ( Table 3 ), and the typically applied CAM concentrations in the marketed product, (0.5% or 1%), the CAM-Lip formulations were tested for their antibiotic activity a[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Only small differences between the diameter of the inhibition zones were observed between the CAM-Lip and CAM-Sol formulations ( Table 4 ), and only for the 750 mg/ml CAM-concentration samples, a sign[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
TM affects CALM1
| 10
TM binds CALM1. 10 / 10
| 10

sparser
"Experimental points at identical protein concentration (1.10 mg/mL) for carboxyamidomethylated tropomyosin (CAM-Tm) are shown as open squares in Fig. 1."

sparser
"CD) vs mg/mL. spline are T (&quot;C) for Tm, CAM-Tm, and CM-Tm in Dotted curve is spline through data through data for CAM-Tm (see Fig. 1). for CM-Tm."

sparser
"Of the sample, 62.9% had used at least 1 form of CAM or TM."

sparser
"Fraction helix (from CD) vs T (&quot;C) for Tm and CAM-Tm in NaCl,,,NaPi,, (7.4)."

sparser
"A number of physical studies have Abbreviations are; IAA, iodoacetic acid; IAM, iodoacetamide; Tm, reduced cardiac (au) tropomyosin; CAM-Tm, carboxyamidomethylated tropomyosin; CM-Tm, carboxymethylated tropomyosin; DTT, dithiothreitol; CD, circular dichroism."

sparser
"Experimental points (open squares) are for CAM-Tm."

sparser
"The data for CAM-Tm fall very close to those for the parent, but the former define a slightly, but distinctly, biphasic curve (three inflection points) that is below that of the parent in the range 40-50°C. The data for carboxymethylated tropomyosin (CM-Tm) are shown as open circles in Fig. 2, along with spline curves for Tm (dotted) and CAM-Tm (solid)."

sparser
"The data for CM-Tm fall on a drastically biphasic curve, markedly below that of both parent and of CAM-Tm in the range 30-50°C. The last stage of unfolding (> 50°C) seems to be indistinguishable in the three cases."

sparser
"3, 1990 BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS From the empirical point of view, then, it is clear that CAM-Tm unfolds roughly, but not precisely, like the parent, but that CM-Tm unfolds rather differently from it."

sparser
"The World Health Organization (WHO) reported that between 70% and 90% of the populations of Canada, France, Germany, and Italy have used some form of TM or CAM and that 110 of the 193 WHO member states reported having some type of policy in place regarding regulation and/or registration of traditional medications in 2007 [ xref ]."
SP affects CALM1
| 10
CALM1 binds SP. 10 / 10
| 10

sparser
"Comparing CAM5‐GCM, CAM6‐GCM, SAM0‐UNICON, SPCAM, and SPX‐CAM can reveal how the representation of convection affects the RCE state across the same parent model."

sparser
"SPCAM and SPX‐CAM differ only in how surface enthalpy fluxes are calculated (i.e., on the parent GCM grid or superparameterized by the embedded CRMs)."

sparser
"Beucler et al. apply these methods to a climate model, SP-CAM with an aquaplanet boundary condition, similar to Gentine et al. ( xref ) and Rasp et al. ( xref )."

sparser
"Brenowitz et al. ( xref ) investigate both SP-CAM, the climate model investigated by Gentine et al. ( xref ) and Rasp et al. ( xref ), and the coarse-grained global cloud resolving model investigated by Brenowitz and Bretherton ( xref , xref )."

sparser
"This phenomenon occurs for both SP-CAM and the coarse-grained global cloud resolving model."

sparser
"Using QuickBeam, the vertical reflectivity structure of DCCs is analyzed in two versions of the Superparameterized Community Atmospheric Model (SP-CAM) with single-moment (no graupel) and double-moment (with graupel) microphysics."

sparser
"In this section, we will examine the ability of SP-CAM to replicate the properties of DCCs observed by CloudSat, in particular the double-arc reflectivity structure."

sparser
"There are two obvious, simple, possible causes for the lack of a double-arc CFAD structure in the CRM component of SP-CAM, beyond the lack of prognosed graupel in SPV4 and SPG4."

sparser
"If the discontinuous jump in reflectivity exists in reality, but the CRM fails to replicate it, then a missing double-arc structure in SP-CAM is not simply caused by weak updrafts in the CRM."

sparser
"While SP-CAM (in particular SPV5) can represent certain properties of organized convection, such as diurnal propagation ( xref ), the CRM does not allow realistic organization of convection."
NOS3 affects CALM1
1 7 | 2
1 7 | 2

"Electrons flow from the C-terminal reductase domain of one NOS monomer to the N-terminal oxygenase domain of the other NOS monomer (Siddhanta et al., 1998). The primary mode of enzyme activation is the binding of calcium-bound calmodulin to the N-terminal CaM-binding domain. This facilitates a structure change and the flow of electrons from NADPH through the flavins to the oxygenase domain of the other eNOS monomer"

No evidence text available

No evidence text available

sparser
"We did not observe any interaction between eNOS and CAV1, despite showing a specific and calcium-dependent interaction of eNOS and CALM1 using the same cf expression system."

No evidence text available

No evidence text available

sparser
"Additionally, CR can act on the genes of the upstream pathway, such as IL1B and TNF, which are proinflammatory mediators [ xref , xref ], while ATR can act on downstream genes, such as CALM1 and NOS3, which are associated with learning and memory and anti-inflammatory processes."

No evidence text available

No evidence text available

No evidence text available
CALM1 affects TM
| 10
TM binds CALM1. 10 / 10
| 10

sparser
"Experimental points at identical protein concentration (1.10 mg/mL) for carboxyamidomethylated tropomyosin (CAM-Tm) are shown as open squares in Fig. 1."

sparser
"CD) vs mg/mL. spline are T (&quot;C) for Tm, CAM-Tm, and CM-Tm in Dotted curve is spline through data through data for CAM-Tm (see Fig. 1). for CM-Tm."

sparser
"Of the sample, 62.9% had used at least 1 form of CAM or TM."

sparser
"Fraction helix (from CD) vs T (&quot;C) for Tm and CAM-Tm in NaCl,,,NaPi,, (7.4)."

sparser
"A number of physical studies have Abbreviations are; IAA, iodoacetic acid; IAM, iodoacetamide; Tm, reduced cardiac (au) tropomyosin; CAM-Tm, carboxyamidomethylated tropomyosin; CM-Tm, carboxymethylated tropomyosin; DTT, dithiothreitol; CD, circular dichroism."

sparser
"Experimental points (open squares) are for CAM-Tm."

sparser
"The data for CAM-Tm fall very close to those for the parent, but the former define a slightly, but distinctly, biphasic curve (three inflection points) that is below that of the parent in the range 40-50°C. The data for carboxymethylated tropomyosin (CM-Tm) are shown as open circles in Fig. 2, along with spline curves for Tm (dotted) and CAM-Tm (solid)."

sparser
"The data for CM-Tm fall on a drastically biphasic curve, markedly below that of both parent and of CAM-Tm in the range 30-50°C. The last stage of unfolding (> 50°C) seems to be indistinguishable in the three cases."

sparser
"3, 1990 BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS From the empirical point of view, then, it is clear that CAM-Tm unfolds roughly, but not precisely, like the parent, but that CM-Tm unfolds rather differently from it."

sparser
"The World Health Organization (WHO) reported that between 70% and 90% of the populations of Canada, France, Germany, and Italy have used some form of TM or CAM and that 110 of the 193 WHO member states reported having some type of policy in place regarding regulation and/or registration of traditional medications in 2007 [ xref ]."
CALM1 affects SP
| 10
CALM1 binds SP. 10 / 10
| 10

sparser
"Comparing CAM5‐GCM, CAM6‐GCM, SAM0‐UNICON, SPCAM, and SPX‐CAM can reveal how the representation of convection affects the RCE state across the same parent model."

sparser
"SPCAM and SPX‐CAM differ only in how surface enthalpy fluxes are calculated (i.e., on the parent GCM grid or superparameterized by the embedded CRMs)."

sparser
"Beucler et al. apply these methods to a climate model, SP-CAM with an aquaplanet boundary condition, similar to Gentine et al. ( xref ) and Rasp et al. ( xref )."

sparser
"Brenowitz et al. ( xref ) investigate both SP-CAM, the climate model investigated by Gentine et al. ( xref ) and Rasp et al. ( xref ), and the coarse-grained global cloud resolving model investigated by Brenowitz and Bretherton ( xref , xref )."

sparser
"This phenomenon occurs for both SP-CAM and the coarse-grained global cloud resolving model."

sparser
"Using QuickBeam, the vertical reflectivity structure of DCCs is analyzed in two versions of the Superparameterized Community Atmospheric Model (SP-CAM) with single-moment (no graupel) and double-moment (with graupel) microphysics."

sparser
"In this section, we will examine the ability of SP-CAM to replicate the properties of DCCs observed by CloudSat, in particular the double-arc reflectivity structure."

sparser
"There are two obvious, simple, possible causes for the lack of a double-arc CFAD structure in the CRM component of SP-CAM, beyond the lack of prognosed graupel in SPV4 and SPG4."

sparser
"If the discontinuous jump in reflectivity exists in reality, but the CRM fails to replicate it, then a missing double-arc structure in SP-CAM is not simply caused by weak updrafts in the CRM."

sparser
"While SP-CAM (in particular SPV5) can represent certain properties of organized convection, such as diurnal propagation ( xref ), the CRM does not allow realistic organization of convection."
CALM1 affects CYP3A4
| 10
| 10

sparser
"Several in vitro studies determined whether CAM can inhibit CYP3A4, but these studies revealed contradictory results."

sparser
"Furthermore, the applicability of this assay for the determination of CYP3A4 inhibition in complex matrix mixtures was successfully demonstrated in an in vitro experiment in which CYP3A4 inhibition by known CAM (β-carotene, green tea, milk thistle and St."

sparser
"CAM inhibits cytochrome P450 3A4 (CYP3A4) and organic anion-transporting polypeptide 1B1 (OATP1B1) and OATP1B3, which influence the drug plasma concentrations not metabolized by CYP3A4, while AZM shows no such effect xref , xref , xref ."

sparser
"Since CAM inhibits CYP3A4, the coadministration of CAM with some drugs metabolised by CYP3A4 should be carefully done."

sparser
"Therefore, the aim was to validate and optimize an LC-MS/MS method for the adequate determination of CYP3A4 inhibition by CAM in human liver microsomes."

sparser
"CAM inhibits cytochrome P450 3A4 (CYP3A4) which is involved in the hepatic metabolism of many drugs."

sparser
"CAM inhibits CYP3A4, one of the enzymes involved in theophylline metabolism [ 39 , 51–53 ], which may explain the mechanism of the theophylline-CAM interaction [ 54 ]."

sparser
"Therefore, it is recommended to combine multiple test systems and methods of quantification to confirm CYP3A4 inhibition by CAM."

sparser
"Besides inhibition of CYP3A4 by CAM, CAM can also induce this CYP enzyme by affecting the gene expression of CYP3A4."

sparser
"However, validated LC-MS/MS methods to determine in vitro CYP3A4 inhibition in human liver microsomes are scarce and not optimized for evaluating CYP3A4 inhibition by CAM."
CALM1 affects CAMKK2
3 2 3 2 |
CALM1 binds CAMKK2.
1 3 2 |
1 3 2 |

No evidence text available

No evidence text available

No evidence text available

No evidence text available

No evidence text available

"The ca2+-calmodulin-dependent protein kinase (cam kinase) cascade includes three kinases: cam-kinase kinase (camkk);and the cam kinases camki and camkiv, which are phosphorylated and activated by camkk."
CALM1 activates CAMKK2.
3 1 |
CALM1 activates CAMKK2. 4 / 4
3 1 |

No evidence text available

"The ca2+-calmodulin-dependent protein kinase (cam kinase) cascade includes three kinases: cam-kinase kinase (camkk);and the cam kinases camki and camkiv, which are phosphorylated and activated by camkk."

No evidence text available

No evidence text available
Chitosan affects CALM1
| 9

sparser
"When comparing the amount of drug remaining on the skin surface after 8 h from the different formulations; 69.76 ± 4.83%, 55.29 ± 4.04%, 44.15 ± 5.50% and 48.86 ± 2.37%, for the CAM-Sol, CAM-Lip, CS-C[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"The bioadhesion of the different hydrogel formulations (CS-hydrogel, CS-CAM and CS-CAM-Lip) to the pig skin was tested using a TA."

sparser
"However, the CS-CAM-Lip only enhanced the penetration of CAM as compared to the CAM-Lip formulation (two-tailed t -test, p < 0.05), and showed a higher retention of CAM on the skin surface than the CS[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"The bioadhesive properties of the final liposome-in-hydrogel formulation (CS-CAM-Lip) were compared with the plain CS-hydrogel and hydrogel containing unentrapped CAM (CS-CAM)."

sparser
"It appears that all the test formulations (CAM-Lip, CS-CAM, CS-CAM-Lip), although acting as the penetration enhancers for CAM, also serve to increase the drug concentration in the skin."

sparser
"The results in Fig. 1 also indicate decreased skin permeation of CAM from liposome dispersion (CAM-Lip), compared to the hydrogel formulation with unentrapped CAM (CS-CAM) after 8 h."

sparser
"Drug release from different vehicles (CS-CAM, CS-CAM-Lip and CAM-Lip) and further permeation through the pig skin, were investigated using Franz diffusion cells (PermeGear, Bethlehem, USA) with a 5 ml[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"This might be explained by the absence of a liposomal carrier in the CS-CAM formulation, as the liposomes are expected to retain the drug in the skin and improve drug deposition."

sparser
"The total drug recovery was found to be good and of the same magnitude for all the formulations; 95.37 ± 4.61%, 93.84 ± 3.27%, 96.52 ± 5.71 and 94.26 ± 5.39%, for the CAM-Sol, CAM-Lip, CS-CAM and CS-C[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
ZAR1 affects CALM1
| 9
| 6

sparser
"The interaction between ZAR1 and CaM1 was independent of the concentration of Calcium, but the interaction was enhanced when the concentration of Calcium increased from 2 to 10 μmol/L ( xref )."

sparser
"To further confirm the above in vitro interaction between ZAR1 and CaM1 in plant cells, bimolecular fluorescent complementation (BiFC) and co-immunoprecipitation (Co-IP) assay were carried out."

sparser
"YFP fluorescence is only detected in the plasma membrane in cells co-expressing p35S : ZAR1-cYFP and p35S : CaM1-nYFP ( xref ), indicating that the interaction between ZAR1 and CaM1 occurs at plasma membrane."

sparser
"This strongly indicates that CaM1 interacts with ZAR1 via the CaMBD domain in vivo ."

sparser
"Together, these data showed that ZAR1 interacts with CaM1 via its CaM-binding domain at the plasma membrane in planta ."

sparser
"It indicates that the interaction between ZAR1 and CaM1 is required for the asymmetric division of zygote."
ZAR1 binds CALM1 and GB1. 3 / 3
| 3

sparser
"To check if ZAR1, CaM1 and AGB1 can form complex in vivo , we co-express pZAR1-cYFP , pAGB1-nYFP and pCaM1-RFP in Arabidopsis protoplast."

sparser
"To investigate whether ZAR1, CaM1 and AGB1 form complex since ZAR1 interacts with both CaM1 and AGB1, an in vitro pull-down experiment was conducted."

sparser
"This indicates that ZAR1, CaM1 and AGB1 are able to form a complex in vitro ."
REG1A affects CALM1
| 9
| 9

sparser
"In particular, a Register-based Content-Addressable Memory (Reg-CAM) is used to accelerate the generation of the non-repeating key stream blocks."

sparser
"Specifically, the implemented controllers of Reg-CAM and SG-DMA are introduced as follows:"

sparser
"CAM implemented in FPGA can be categorized into two types: Register-based CAM (REG-CAM) and RAM-based CAM (MEM-CAM) [ xref ]."

sparser
"Furthermore, to accelerate the processing speed of NR-PRNG for real-time stream processing, the performance of implemented REG-CAM controller introduced in xref was evaluated."

sparser
"As shown in the experimental results in xref b, when the micro-processor employs the REG-CAM controller (μP + HW Accelerator) to operate ten thousand key stream blocks for duplication checking, it takes 27,601 μs."

sparser
"We have integrated this REG-CAM module as part of the system bus (as indicated in the green box in xref ), providing the REG-CAM with a bus interface for the micro-processor to access its relevant control and status registers."

sparser
"This allows the micro-processor to input key stream blocks generated by the KS-Generator controller (as shown in the other green box in xref ) into the REG-CAM controller."

sparser
"In this scenario, as the quantity of generated blocks accumulates, the use of REG-CAM for a hardware-accelerated comparison becomes even more effective compared to the time-consuming software-only approach."

sparser
"This enables the micro-processor (μP in xref ) to retrieve the key block generated by the “KS-Generator” controller, then performs a check on the generated key block using the REG-CAM controller (c."
NTS affects CALM1
| 9
NTS acetylates CALM1.
| 5
NTS acetylates CALM1. 5 / 5
| 5

sparser
"Thus, the disruption on CaM dynamics and endocytic function observed in naa15∆ cells is specifically due to lack of Nt‐acetylation of Cam1."

sparser
"Second, Nt-acetylated Cam1."

sparser
"This indicates that Nt‐acetylation of Cam1 increases the affinity for binding to Myo1 IQ domains, specifically affinity of the second molecule of Cam1."

sparser
"To explore whether Cam1 Nt‐acetylation affects this interaction, changes in FRET signal of the Myo1 IQ12 ‐FRET protein induced by binding of half saturating concentrations of Cam1 (2.5 µ m of Cam1, 0.80 µ m of ACE Cam1) were observed over a range of pCa conditions."

sparser
"To confirm whether the differences observed in calmodulin dynamics is specifically due to Nt‐acetylation of Cam1 alone, or a consequence of Nt‐acetylation of other proteins, equivalent comparative analyses were undertaken betweennaa15 + and naa15∆ cells expressing GFP‐Cam1 [ xref ]."
NTS binds CALM1.
| 4
| 4

sparser
"In the absence or presence of scoparone (EC 50 , 5.54 μM), a pull-down assay was performed to compare the binding of CaM1 (K df , 0.61 μM) to peptides such as NT, CT1, CT1B, PreIQ, and IQ under 1 mM Ca 2+ ."

sparser
"Pull-down assays demonstrated that CaM1 was markedly bound to the NT, CT1, CT1B, PreIQ, and IQ peptides, whereas its binding to CT2, CT3, and CT1A was negligible ( xref a-d)."

sparser
"These findings indicated that CaM1 bound to both the NT and proximal CT motifs of L-VGCC."

sparser
"Although CaM1 binding to the NT region and PreIQ tended to be decreased, while binding to CT1 and CT1B tended to be only slightly increased, CaM1 binding to the IQ domain was markedly increased in the presence of scoparone (47.06%, xref a-b)."
Myo1 affects CALM1
| 9
Myo1 binds CALM1. 9 / 9
| 9

sparser
"Replacing serine 742 within the IQ neck region with a phosphomimetic aspartic acid residue had no significant impact upon the affinity, calcium sensitivity or cooperative nature of the interaction between Myo1 and Cam1 ( xref )."

sparser
"Myo1 and Cam1 associated with the cell membrane in two distinct ways: we observed both (i) rapid, transient, binding of single Myo1 molecules to the cell membrane, characterized by low-intensity, single, stepwise, changes in intensity ( xref ), alongside (ii) longer endocytic events that were much brighter and took much longer ( xref )."

sparser
"The rapid, single-molecule, interactions of Myo1 and Cam1 with the membrane had low mobility (0.03 µm 2 ."

sparser
"If TORC2 does indeed phosphorylate Myo1, it would be important to know, first, whether TORC2 function is elevated in meiotic cells compared to mitotic cells and, second, what the effect of different growth conditions (vegetative, sexual, and nutrient limiting) is on the association of Myo1 with Cam1 vs. Cam2 as assessed via co-immunoprecipitations."

sparser
"Therefore, although Myo1 S742 phosphorylation does not impact the assembly of Myo1Cam1 endocytic foci, it regulates myosin-1 to modulate the activity and function of the ensemble of endocytic proteins during bipolar growth."

sparser
"To correlate Myo1-Cam1 dynamics at sites of endocytosis with the internalization of the mature endosome into the cytoplasm, we followed Cam1 and Cam2 dynamics simultaneously in cam1."

sparser
"Calcium levels within log phase yeast cells are relatively low (100–200 nM) ( xref ; xref ), and so provide conditions that favor the association of Cam1 with Myo1 (pCa, 5.87)."

sparser
"These relative protein levels, binding affinities and low Ca 2+ concentrations favor Cam1 binding to Myo1, over Cam2 at both IQ sites ( xref ), consistent with in vivo observations."

sparser
"These conditions favor interactions between Myo1 and Cam2 over an association of Cam1 with Myo1 ( xref ), which is consistent with important roles for both Myo1 and Cam2 at the leading edge of forespore membrane formation during meiosis ( xref ; xref )."
MXD1 affects CALM1
| 9
| 9

sparser
"This is an important difference compared to the homing into GALT, where the adhesion is driven by the binding of α4β7 integrins to Mad-CAM1 ( xref )."

sparser
"The migration of alloreactive donor T cells to the GI tract is mediated by the binding of the α4β7 integrin on T cells to its ligand, mucosal addressing cellular adhesion molecule (Mad-CAM1), on gut-associated endothelium[ xref ]."

sparser
"Vedolizumab is a monoclonal antibody specific for α4β7 that blocks its binding to MAd-CAM1."

sparser
"These ligands include PSGL-1, the hemopoietic stem cell marker CD34, glycosylation-dependent cell adhesion molecule 1 (GlyCAM1) and mucosal addressin cell adhesion molecule 1 (MAd-CAM1), all of which contain a sulphated form of the sLe x tetrasaccharide. xref - xref However, there are other selectin ligands that occur naturally in humans which do not contain sLe x , the similar tetrasaccharide sLe a , nor structurally related carbohydrate moieties."

sparser
"α4β1 binds to fibronectin splice variants at the CS-1 domain, and to vascular cell adhesion protein 1 (VCAM-1) which is expressed on activated endothelia near sites of inflammation, whereas α4β7 binds[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"The gene NCAN , a CNS-specific extracellular matrix protein whose expression has been linked to malignant behavior of neuroblastoma, xref and additional genes encoding cell surface proteins relevant for adhesion of neurons and leukocytes ( DSCAML1 , MAD-CAM1 ) also correlated significantly with OMAS neuroimmune symptoms."

sparser
"Its mechanism of action comprises blocking the interaction between the α4-β7 integrin in lymphocytes and the MAD-CAM1 adressin at the endothelial wall."

sparser
"Throughout foetal development in mice, chemokines such as CXCL12 and -13, CCL19, -20 and -21, and adhesion molecules including vascular cell adhesion molecule 1 (VCAM-1), mucosal vascular addressing cell adhesion molecule 1 (MAD-CAM1) and intercellular adhesion molecule 1 (ICAM-1), altogether signal to promote the circulation of LTi cells and the migration of T- and B-lymphocytes into primordia resembling Peyer’s patches (Kunkel et al. xref ; Patel et al. xref )."

sparser
"Moreover, hypersialylation promotes tumor dissemination and metastasis by modulating the function of different integrins. xref For example, inhibiting sialylation in MM impairs interactions between tumor cells, VCAM1 and mucosal vascular addressin cell adhesion molecule 1 (MAD-CAM1) by altering the maturation of CD49d. xref Sialylation also participates in the generation of selectin ligands."
MIP affects CALM1
2 2 | 5
CALM1 binds MIP. 5 / 5
| 5

sparser
"Then the imprinted polymer membrane (MIPs-CAM) was developed via boron affinity surface imprinting polymerization."

sparser
"The as-prepared MIPs-CAM showed homogeneous and abundant imprinted layer, good thermal stability."

sparser
"The batch adsorption results showed that the MIPs-CAM had fast adsorption kinetics, specific recognition ability, and the adsorption capacity could obtain 63.598 mg g -1 , which was two times higher than that of non-imprinted membrane (NIPs-CAM)."

sparser
"Additionally, the adsorption capacity of MIPs-CAM still reached 85% of the initial result after five cycles."

sparser
"These results indicate that boron affinity MIPs-CAM with high performance will provide a promising platform for the separation and purification of other cis-diol drug molecules from environmental resources."
2 2 |

No evidence text available

No evidence text available

No evidence text available

No evidence text available
MAPT affects CALM1
2 1 | 1 5
2 1 | 1 2

No evidence text available

reach
"CALM1, a phosphorylase kinase, binds with α-synuclein and tau ( Lee et al., 1996, 2002; Padilla et al., 1990; Pankratz et al., 2012; Zhang et al., 2013 )."

sparser
"The accelerated degeneration following CALM overexpression was associated with increased tau phosphorylation and accumulation of thioflavin- S -positive tangles ( xref and xref )."

sparser
"Also, CALM was found to be cleaved in diseased brain tissue and associated with hyper-phosphorylated tau in neurofibrillary tangles [ xref ] ( xref )."

No evidence text available

No evidence text available
CALM1 binds SNCA and MAPT. 3 / 3
| 3

sparser
"Although the function of protein encoded by was still unclear, RIT2 protein was reported to bind to calmodulin 1, a phosphorylase kinase, which also binds to α-synuclein and tau (, ; )."

sparser
"RIT2 protein was found to bind to the product of calmodulin 1 ( Lee et al., 1996 ) which binds to human SNCA and MAPT, suggesting RIT2 may also be part of PD pathways as MAPT and SNCA ( Lee et al., [MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Researches showed that RIT2 protein to bind to a phosphorylase kinase, calmodulin 1, which binds to SNCA and MAPT ( Lee et al., 1996, 2002; Padilla et al., 1990 )."
LEC affects CALM1
| 9
| 9

sparser
"Selectin (32) or LEC-CAM (33) include lymphocyte homing receptor (MEL-14), endothelial leucocyte adhesion molecule 1(ELAM- l), and granule membrane protein (GMP- 140)."

sparser
"l The LEC-CAM Family At least three other adhesion molecules (ELAM-1, GMP-140, and LAM-l) that influence neutrophils have been characterized."

sparser
"This is illus- trated in the elucidation of the LEC-CAM ligands de- scribed below."

sparser
"Granule membrane protein 140 (GMP- 140) and endothelial leukocyte adhesion molecule 1 (ELAM-1) are members of the LEC-CAM family."

sparser
"Since adhesion and homing involve multiple, structurally distinct receptodligand molecules, it is possible that LEC-CAM 1 does not cover a central role in the ALL blast localization in lymphoid organs, but requires the contribution of additional cytoadhesion structures."

sparser
"Final confirmation that the oligosaccharides described here are indeed LEC-CAM ligands must await de novo synthesis and confirmation of their binding activity."

sparser
"Recent evidence from cloning the Hermes-l/CD44 and MEL-14 genes indicates the MEL-14 belongs to a structurally different family of molecules (termed Lectin, EGF, Complement-cellular adhesion molecule [LEC-CAM])'o'*'0&quot;'07."

sparser
"The expression of some adhesion molecules on BM mononuclear cells was assessed by a panel of MoAbs directed against: CD1 la, CDI lb, CDI lc, CD44, CD49d(VLA4), CD49e(VLA-5), LEC-CAM I. P-170 expression P-170 expression was evaluated by the MoAb C219 (Cis International, Centocor Diagnostics), which is an IgG2b antibody that recognizes a cytoplasmic antigen."

sparser
"Here we will briefly describe these ap- proaches and the considerable amount of information ob- tained about the LEC-CAM carbohydrate ligands."
KRAS affects CALM1
5 2 | 2
5 2 | 2

sparser
"SCN5A could activate PKA-dependent MAPK pathways in CRCs [ 27 ], while the current study indicated that the suppression of MAPK/PI3K pathways was attributed to destabilization of the KRas-CALM complex[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

No evidence text available

No evidence text available

No evidence text available

No evidence text available

No evidence text available

No evidence text available

No evidence text available

sparser
"In addition, KRAS has been shown to bind to both RAF and CALM proteins at the same time and the binding of KRAS to CALM is independent from RAF [ xref ]."
HR affects CALM1
| 9
CALM1 binds HR. 9 / 9
| 9

sparser
"Generalized CAM methods, like Grad-CAM [ xref ], Grad-CAM++ [ xref ], Score-CAM [ xref ], Poly-CAM [ xref ], and HR-CAM [ xref ], explore the decision-making of an arbitrary CNN."

sparser
"For examples, two particular CAMS, the Gradient Weighted CAM (Grad-CAM) and High Resolution CAM (HR-CAM) have been shown to provide insights into the process of AI decision-making for oral cancer and other cancer types, with improved diagnostic performance and positive user feedback ( xref – xref )."

sparser
"We applied Explainable AI techniques, namely Grad-CAM and HR-CAM, to both networks and explored important features that contributed to their decisions."

sparser
"Additionally, we aimed to explore which features were responsible for both networks’ decisions, using the two Explainable AI methods Grad-CAM [ xref ] and HR-CAM [ xref ]."

sparser
"The techniques Grad-CAM and HR-CAM were used to create visual explanations."

sparser
"Another limitation relates to the use of HR-CAM for the segmentation network."

sparser
"HR-CAM relies on adding a global average pooling layer and a dense layer on top of the trained network [ xref ]."

sparser
"For explaining the predictions of a segmentation network, Grad-CAM is more suitable than HR-CAM."

sparser
"Specifically, Grad-CAM generates heatmaps by computing the gradients of the target class score with respect to the feature maps of the last convolutional layers in the CNN while HR-CAM aggregates feature maps from several layers to create a high-resolution localization map ( xref )."
FHL2 affects CALM1
| 9
| 9

sparser
"CALM interacts with FHL2 in vitro ."

sparser
"CALM interacts with FHL2 in vivo ."

sparser
"To learn more about the interaction between CALM and FHL2, colocalization experiments were performed."

sparser
"However, more studies will be required to understand the role of the CALMFHL2 interaction in leukemogenesis and especially its role in erythroleukemia."

sparser
"The interaction between CALM and FHL2 was confirmed by glutathione S -transferase-pulldown assay and co-immunoprecipitation experiments."

sparser
"To confirm the interaction between CALM and FHL2 in vitro , a glutathione S -transferase (GST)-pulldown assay was performed."

sparser
"These results indicate a direct physical interaction between CALM and FHL2."

sparser
"The N-terminal domain (aa 22–138) of CALM contains the ANTH domain, which specifically binds to lipids (PtdIns(4,5)P 2 ) in the plasma membrane. xref , xref , xref , xref The three-dimensional structure of the N-terminal 280 amino acids of CALM has been solved and consists of 10 α-helices, which aggregate to form a globular protein. xref The C-terminal half of CALM, on the other hand, has most likely a poorly ordered structure that contains multiple short protein interaction motifs, functioning like a flexible ‘fishing line'. xref This composition of CALM permits the establishment of interactions during clathrin-coated pit assembly. xref Interestingly, FHL2 binds to β-integrin, xref which together with clathrin, a major binding partner of CALM, has been shown to be involved in endocytosis. xref , xref Taken together, these data suggest a role for the CALMFHL2 interaction in the complex interaction network in endocytosis."

sparser
"The in vivo interaction between CALM and FHL2 was confirmed by co-immunoprecipitation experiments."
DRG affects CALM1
| 9
DRG binds CALM1. 9 / 9
| 9

sparser
"The CAM-DRG model allows investigation of interactions between the nerve and cancer during PNI."

sparser
"We suggest using the CAM-DRG model for mechanistic studies of PNI."

sparser
"Our laboratory uses a CAM-DRG model in which a mammalian DRG is isolated and grafted onto the surface of the upper CAM."

sparser
"The impact of ND on tumor growth was evaluated in chick chorioallantoic-dorsal root ganglia (CAM-DRG) and murine surgical denervation models."

sparser
"Some advantages to the CAM-DRG approach include assessment of PNI and other phenotypes, such as tumor growth, metastasis and angiogenesis."

sparser
"The CAM-DRG method has some limitations, including short observation time frame."

sparser
"Increasing the number of DRG, in the CAM-DRG model, increased tumor size."

sparser
"Using the chick CAM-DRG in vivo model ( xref ), we grafted one or three rat DRG onto the CAM."

sparser
"These findings are supported by two different in vivo approaches; mouse surgical denervation and CAM-DRG models."
CAO affects CALM1
| 9
| 9

sparser
"We recruited 25 lower-grade children for the examination of test-retest reliability, 75 children from all grade levels, and 10 senior schoolteachers for the examination of the CAM-CHL's convergent validity and the investigation of handwriting legibility."

sparser
"We used the CAM-CHL to assess handwriting legibility in four domains: Size, Orientation, Position, and Deformation."

sparser
"The CAM-CHL demonstrated good to excellent test-retest reliability and acceptable random measurement error in all legibility domains."

sparser
"The CAM-CHL had fair to moderate convergent validity with schoolteachers' perceptions."

sparser
"The CAM-CHL, a comprehensive and objective method of assessing Chinese handwriting legibility, has sound reliability and acceptable validity, suggesting its potential as an outcome measure for school-age children."

sparser
"What This Article Adds: The CAM-CHL can be used in comprehensive evaluations of Chinese handwriting legibility in school-age children."

sparser
"The CAM-CHL has acceptable psychometrics for use as an outcome measure."

sparser
"Development and Psychometric Evaluation of the Computer-Aided Measure of Chinese Handwriting Legibility (CAM-CHL) for School-Age Children."

sparser
"To evaluate the psychometrics of the Computer-Aided Measure of Chinese Handwriting Legibility (CAM-CHL) and to investigate Chinese handwriting legibility in school-age children using the CAM-CHL."
CALM1 affects chitosan
| 9

sparser
"When comparing the amount of drug remaining on the skin surface after 8 h from the different formulations; 69.76 ± 4.83%, 55.29 ± 4.04%, 44.15 ± 5.50% and 48.86 ± 2.37%, for the CAM-Sol, CAM-Lip, CS-C[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"The bioadhesion of the different hydrogel formulations (CS-hydrogel, CS-CAM and CS-CAM-Lip) to the pig skin was tested using a TA."

sparser
"However, the CS-CAM-Lip only enhanced the penetration of CAM as compared to the CAM-Lip formulation (two-tailed t -test, p < 0.05), and showed a higher retention of CAM on the skin surface than the CS[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"The bioadhesive properties of the final liposome-in-hydrogel formulation (CS-CAM-Lip) were compared with the plain CS-hydrogel and hydrogel containing unentrapped CAM (CS-CAM)."

sparser
"It appears that all the test formulations (CAM-Lip, CS-CAM, CS-CAM-Lip), although acting as the penetration enhancers for CAM, also serve to increase the drug concentration in the skin."

sparser
"The results in Fig. 1 also indicate decreased skin permeation of CAM from liposome dispersion (CAM-Lip), compared to the hydrogel formulation with unentrapped CAM (CS-CAM) after 8 h."

sparser
"Drug release from different vehicles (CS-CAM, CS-CAM-Lip and CAM-Lip) and further permeation through the pig skin, were investigated using Franz diffusion cells (PermeGear, Bethlehem, USA) with a 5 ml[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"This might be explained by the absence of a liposomal carrier in the CS-CAM formulation, as the liposomes are expected to retain the drug in the skin and improve drug deposition."

sparser
"The total drug recovery was found to be good and of the same magnitude for all the formulations; 95.37 ± 4.61%, 93.84 ± 3.27%, 96.52 ± 5.71 and 94.26 ± 5.39%, for the CAM-Sol, CAM-Lip, CS-CAM and CS-C[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"
CALM1 affects ZAR1
| 9
| 6

sparser
"The interaction between ZAR1 and CaM1 was independent of the concentration of Calcium, but the interaction was enhanced when the concentration of Calcium increased from 2 to 10 μmol/L ( xref )."

sparser
"To further confirm the above in vitro interaction between ZAR1 and CaM1 in plant cells, bimolecular fluorescent complementation (BiFC) and co-immunoprecipitation (Co-IP) assay were carried out."

sparser
"YFP fluorescence is only detected in the plasma membrane in cells co-expressing p35S : ZAR1-cYFP and p35S : CaM1-nYFP ( xref ), indicating that the interaction between ZAR1 and CaM1 occurs at plasma membrane."

sparser
"This strongly indicates that CaM1 interacts with ZAR1 via the CaMBD domain in vivo ."

sparser
"Together, these data showed that ZAR1 interacts with CaM1 via its CaM-binding domain at the plasma membrane in planta ."

sparser
"It indicates that the interaction between ZAR1 and CaM1 is required for the asymmetric division of zygote."
ZAR1 binds CALM1 and GB1. 3 / 3
| 3

sparser
"To check if ZAR1, CaM1 and AGB1 can form complex in vivo , we co-express pZAR1-cYFP , pAGB1-nYFP and pCaM1-RFP in Arabidopsis protoplast."

sparser
"To investigate whether ZAR1, CaM1 and AGB1 form complex since ZAR1 interacts with both CaM1 and AGB1, an in vitro pull-down experiment was conducted."

sparser
"This indicates that ZAR1, CaM1 and AGB1 are able to form a complex in vitro ."
CALM1 affects REG1A
| 9
| 9

sparser
"In particular, a Register-based Content-Addressable Memory (Reg-CAM) is used to accelerate the generation of the non-repeating key stream blocks."

sparser
"Specifically, the implemented controllers of Reg-CAM and SG-DMA are introduced as follows:"

sparser
"CAM implemented in FPGA can be categorized into two types: Register-based CAM (REG-CAM) and RAM-based CAM (MEM-CAM) [ xref ]."

sparser
"Furthermore, to accelerate the processing speed of NR-PRNG for real-time stream processing, the performance of implemented REG-CAM controller introduced in xref was evaluated."

sparser
"As shown in the experimental results in xref b, when the micro-processor employs the REG-CAM controller (μP + HW Accelerator) to operate ten thousand key stream blocks for duplication checking, it takes 27,601 μs."

sparser
"We have integrated this REG-CAM module as part of the system bus (as indicated in the green box in xref ), providing the REG-CAM with a bus interface for the micro-processor to access its relevant control and status registers."

sparser
"This allows the micro-processor to input key stream blocks generated by the KS-Generator controller (as shown in the other green box in xref ) into the REG-CAM controller."

sparser
"In this scenario, as the quantity of generated blocks accumulates, the use of REG-CAM for a hardware-accelerated comparison becomes even more effective compared to the time-consuming software-only approach."

sparser
"This enables the micro-processor (μP in xref ) to retrieve the key block generated by the “KS-Generator” controller, then performs a check on the generated key block using the REG-CAM controller (c."
CALM1 affects Myo1
| 9
Myo1 binds CALM1. 9 / 9
| 9

sparser
"Replacing serine 742 within the IQ neck region with a phosphomimetic aspartic acid residue had no significant impact upon the affinity, calcium sensitivity or cooperative nature of the interaction between Myo1 and Cam1 ( xref )."

sparser
"Myo1 and Cam1 associated with the cell membrane in two distinct ways: we observed both (i) rapid, transient, binding of single Myo1 molecules to the cell membrane, characterized by low-intensity, single, stepwise, changes in intensity ( xref ), alongside (ii) longer endocytic events that were much brighter and took much longer ( xref )."

sparser
"The rapid, single-molecule, interactions of Myo1 and Cam1 with the membrane had low mobility (0.03 µm 2 ."

sparser
"If TORC2 does indeed phosphorylate Myo1, it would be important to know, first, whether TORC2 function is elevated in meiotic cells compared to mitotic cells and, second, what the effect of different growth conditions (vegetative, sexual, and nutrient limiting) is on the association of Myo1 with Cam1 vs. Cam2 as assessed via co-immunoprecipitations."

sparser
"Therefore, although Myo1 S742 phosphorylation does not impact the assembly of Myo1Cam1 endocytic foci, it regulates myosin-1 to modulate the activity and function of the ensemble of endocytic proteins during bipolar growth."

sparser
"To correlate Myo1-Cam1 dynamics at sites of endocytosis with the internalization of the mature endosome into the cytoplasm, we followed Cam1 and Cam2 dynamics simultaneously in cam1."

sparser
"Calcium levels within log phase yeast cells are relatively low (100–200 nM) ( xref ; xref ), and so provide conditions that favor the association of Cam1 with Myo1 (pCa, 5.87)."

sparser
"These relative protein levels, binding affinities and low Ca 2+ concentrations favor Cam1 binding to Myo1, over Cam2 at both IQ sites ( xref ), consistent with in vivo observations."

sparser
"These conditions favor interactions between Myo1 and Cam2 over an association of Cam1 with Myo1 ( xref ), which is consistent with important roles for both Myo1 and Cam2 at the leading edge of forespore membrane formation during meiosis ( xref ; xref )."
CALM1 affects MXD1
| 9
| 9

sparser
"This is an important difference compared to the homing into GALT, where the adhesion is driven by the binding of α4β7 integrins to Mad-CAM1 ( xref )."

sparser
"The migration of alloreactive donor T cells to the GI tract is mediated by the binding of the α4β7 integrin on T cells to its ligand, mucosal addressing cellular adhesion molecule (Mad-CAM1), on gut-associated endothelium[ xref ]."

sparser
"Vedolizumab is a monoclonal antibody specific for α4β7 that blocks its binding to MAd-CAM1."

sparser
"These ligands include PSGL-1, the hemopoietic stem cell marker CD34, glycosylation-dependent cell adhesion molecule 1 (GlyCAM1) and mucosal addressin cell adhesion molecule 1 (MAd-CAM1), all of which contain a sulphated form of the sLe x tetrasaccharide. xref - xref However, there are other selectin ligands that occur naturally in humans which do not contain sLe x , the similar tetrasaccharide sLe a , nor structurally related carbohydrate moieties."

sparser
"α4β1 binds to fibronectin splice variants at the CS-1 domain, and to vascular cell adhesion protein 1 (VCAM-1) which is expressed on activated endothelia near sites of inflammation, whereas α4β7 binds[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"The gene NCAN , a CNS-specific extracellular matrix protein whose expression has been linked to malignant behavior of neuroblastoma, xref and additional genes encoding cell surface proteins relevant for adhesion of neurons and leukocytes ( DSCAML1 , MAD-CAM1 ) also correlated significantly with OMAS neuroimmune symptoms."

sparser
"Its mechanism of action comprises blocking the interaction between the α4-β7 integrin in lymphocytes and the MAD-CAM1 adressin at the endothelial wall."

sparser
"Throughout foetal development in mice, chemokines such as CXCL12 and -13, CCL19, -20 and -21, and adhesion molecules including vascular cell adhesion molecule 1 (VCAM-1), mucosal vascular addressing cell adhesion molecule 1 (MAD-CAM1) and intercellular adhesion molecule 1 (ICAM-1), altogether signal to promote the circulation of LTi cells and the migration of T- and B-lymphocytes into primordia resembling Peyer’s patches (Kunkel et al. xref ; Patel et al. xref )."

sparser
"Moreover, hypersialylation promotes tumor dissemination and metastasis by modulating the function of different integrins. xref For example, inhibiting sialylation in MM impairs interactions between tumor cells, VCAM1 and mucosal vascular addressin cell adhesion molecule 1 (MAD-CAM1) by altering the maturation of CD49d. xref Sialylation also participates in the generation of selectin ligands."
CALM1 affects MIP
2 2 | 5
CALM1 binds MIP. 5 / 5
| 5

sparser
"Then the imprinted polymer membrane (MIPs-CAM) was developed via boron affinity surface imprinting polymerization."

sparser
"The as-prepared MIPs-CAM showed homogeneous and abundant imprinted layer, good thermal stability."

sparser
"The batch adsorption results showed that the MIPs-CAM had fast adsorption kinetics, specific recognition ability, and the adsorption capacity could obtain 63.598 mg g -1 , which was two times higher than that of non-imprinted membrane (NIPs-CAM)."

sparser
"Additionally, the adsorption capacity of MIPs-CAM still reached 85% of the initial result after five cycles."

sparser
"These results indicate that boron affinity MIPs-CAM with high performance will provide a promising platform for the separation and purification of other cis-diol drug molecules from environmental resources."
2 2 |

No evidence text available

No evidence text available

No evidence text available

No evidence text available
CALM1 affects MAPT
2 1 | 1 5
2 1 | 1 2

No evidence text available

reach
"CALM1, a phosphorylase kinase, binds with α-synuclein and tau ( Lee et al., 1996, 2002; Padilla et al., 1990; Pankratz et al., 2012; Zhang et al., 2013 )."

sparser
"The accelerated degeneration following CALM overexpression was associated with increased tau phosphorylation and accumulation of thioflavin- S -positive tangles ( xref and xref )."

sparser
"Also, CALM was found to be cleaved in diseased brain tissue and associated with hyper-phosphorylated tau in neurofibrillary tangles [ xref ] ( xref )."

No evidence text available

No evidence text available
CALM1 binds SNCA and MAPT. 3 / 3
| 3

sparser
"Although the function of protein encoded by was still unclear, RIT2 protein was reported to bind to calmodulin 1, a phosphorylase kinase, which also binds to α-synuclein and tau (, ; )."

sparser
"RIT2 protein was found to bind to the product of calmodulin 1 ( Lee et al., 1996 ) which binds to human SNCA and MAPT, suggesting RIT2 may also be part of PD pathways as MAPT and SNCA ( Lee et al., [MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Researches showed that RIT2 protein to bind to a phosphorylase kinase, calmodulin 1, which binds to SNCA and MAPT ( Lee et al., 1996, 2002; Padilla et al., 1990 )."
CALM1 affects LEC
| 9
| 9

sparser
"Selectin (32) or LEC-CAM (33) include lymphocyte homing receptor (MEL-14), endothelial leucocyte adhesion molecule 1(ELAM- l), and granule membrane protein (GMP- 140)."

sparser
"l The LEC-CAM Family At least three other adhesion molecules (ELAM-1, GMP-140, and LAM-l) that influence neutrophils have been characterized."

sparser
"This is illus- trated in the elucidation of the LEC-CAM ligands de- scribed below."

sparser
"Granule membrane protein 140 (GMP- 140) and endothelial leukocyte adhesion molecule 1 (ELAM-1) are members of the LEC-CAM family."

sparser
"Since adhesion and homing involve multiple, structurally distinct receptodligand molecules, it is possible that LEC-CAM 1 does not cover a central role in the ALL blast localization in lymphoid organs, but requires the contribution of additional cytoadhesion structures."

sparser
"Final confirmation that the oligosaccharides described here are indeed LEC-CAM ligands must await de novo synthesis and confirmation of their binding activity."

sparser
"Recent evidence from cloning the Hermes-l/CD44 and MEL-14 genes indicates the MEL-14 belongs to a structurally different family of molecules (termed Lectin, EGF, Complement-cellular adhesion molecule [LEC-CAM])'o'*'0&quot;'07."

sparser
"The expression of some adhesion molecules on BM mononuclear cells was assessed by a panel of MoAbs directed against: CD1 la, CDI lb, CDI lc, CD44, CD49d(VLA4), CD49e(VLA-5), LEC-CAM I. P-170 expression P-170 expression was evaluated by the MoAb C219 (Cis International, Centocor Diagnostics), which is an IgG2b antibody that recognizes a cytoplasmic antigen."

sparser
"Here we will briefly describe these ap- proaches and the considerable amount of information ob- tained about the LEC-CAM carbohydrate ligands."
CALM1 affects HR
| 9
CALM1 binds HR. 9 / 9
| 9

sparser
"Generalized CAM methods, like Grad-CAM [ xref ], Grad-CAM++ [ xref ], Score-CAM [ xref ], Poly-CAM [ xref ], and HR-CAM [ xref ], explore the decision-making of an arbitrary CNN."

sparser
"For examples, two particular CAMS, the Gradient Weighted CAM (Grad-CAM) and High Resolution CAM (HR-CAM) have been shown to provide insights into the process of AI decision-making for oral cancer and other cancer types, with improved diagnostic performance and positive user feedback ( xref – xref )."

sparser
"We applied Explainable AI techniques, namely Grad-CAM and HR-CAM, to both networks and explored important features that contributed to their decisions."

sparser
"Additionally, we aimed to explore which features were responsible for both networks’ decisions, using the two Explainable AI methods Grad-CAM [ xref ] and HR-CAM [ xref ]."

sparser
"The techniques Grad-CAM and HR-CAM were used to create visual explanations."

sparser
"Another limitation relates to the use of HR-CAM for the segmentation network."

sparser
"HR-CAM relies on adding a global average pooling layer and a dense layer on top of the trained network [ xref ]."

sparser
"For explaining the predictions of a segmentation network, Grad-CAM is more suitable than HR-CAM."

sparser
"Specifically, Grad-CAM generates heatmaps by computing the gradients of the target class score with respect to the feature maps of the last convolutional layers in the CNN while HR-CAM aggregates feature maps from several layers to create a high-resolution localization map ( xref )."
CALM1 affects FHL2
| 9
| 9

sparser
"CALM interacts with FHL2 in vitro ."

sparser
"CALM interacts with FHL2 in vivo ."

sparser
"To learn more about the interaction between CALM and FHL2, colocalization experiments were performed."

sparser
"However, more studies will be required to understand the role of the CALMFHL2 interaction in leukemogenesis and especially its role in erythroleukemia."

sparser
"The interaction between CALM and FHL2 was confirmed by glutathione S -transferase-pulldown assay and co-immunoprecipitation experiments."

sparser
"To confirm the interaction between CALM and FHL2 in vitro , a glutathione S -transferase (GST)-pulldown assay was performed."

sparser
"These results indicate a direct physical interaction between CALM and FHL2."

sparser
"The N-terminal domain (aa 22–138) of CALM contains the ANTH domain, which specifically binds to lipids (PtdIns(4,5)P 2 ) in the plasma membrane. xref , xref , xref , xref The three-dimensional structure of the N-terminal 280 amino acids of CALM has been solved and consists of 10 α-helices, which aggregate to form a globular protein. xref The C-terminal half of CALM, on the other hand, has most likely a poorly ordered structure that contains multiple short protein interaction motifs, functioning like a flexible ‘fishing line'. xref This composition of CALM permits the establishment of interactions during clathrin-coated pit assembly. xref Interestingly, FHL2 binds to β-integrin, xref which together with clathrin, a major binding partner of CALM, has been shown to be involved in endocytosis. xref , xref Taken together, these data suggest a role for the CALMFHL2 interaction in the complex interaction network in endocytosis."

sparser
"The in vivo interaction between CALM and FHL2 was confirmed by co-immunoprecipitation experiments."
CALM1 affects DRG
| 9
DRG binds CALM1. 9 / 9
| 9

sparser
"The CAM-DRG model allows investigation of interactions between the nerve and cancer during PNI."

sparser
"We suggest using the CAM-DRG model for mechanistic studies of PNI."

sparser
"Our laboratory uses a CAM-DRG model in which a mammalian DRG is isolated and grafted onto the surface of the upper CAM."

sparser
"The impact of ND on tumor growth was evaluated in chick chorioallantoic-dorsal root ganglia (CAM-DRG) and murine surgical denervation models."

sparser
"Some advantages to the CAM-DRG approach include assessment of PNI and other phenotypes, such as tumor growth, metastasis and angiogenesis."

sparser
"The CAM-DRG method has some limitations, including short observation time frame."

sparser
"Increasing the number of DRG, in the CAM-DRG model, increased tumor size."

sparser
"Using the chick CAM-DRG in vivo model ( xref ), we grafted one or three rat DRG onto the CAM."

sparser
"These findings are supported by two different in vivo approaches; mouse surgical denervation and CAM-DRG models."
CALM1 affects CAO
| 9
| 9

sparser
"We recruited 25 lower-grade children for the examination of test-retest reliability, 75 children from all grade levels, and 10 senior schoolteachers for the examination of the CAM-CHL's convergent validity and the investigation of handwriting legibility."

sparser
"We used the CAM-CHL to assess handwriting legibility in four domains: Size, Orientation, Position, and Deformation."

sparser
"The CAM-CHL demonstrated good to excellent test-retest reliability and acceptable random measurement error in all legibility domains."

sparser
"The CAM-CHL had fair to moderate convergent validity with schoolteachers' perceptions."

sparser
"The CAM-CHL, a comprehensive and objective method of assessing Chinese handwriting legibility, has sound reliability and acceptable validity, suggesting its potential as an outcome measure for school-age children."

sparser
"What This Article Adds: The CAM-CHL can be used in comprehensive evaluations of Chinese handwriting legibility in school-age children."

sparser
"The CAM-CHL has acceptable psychometrics for use as an outcome measure."

sparser
"Development and Psychometric Evaluation of the Computer-Aided Measure of Chinese Handwriting Legibility (CAM-CHL) for School-Age Children."

sparser
"To evaluate the psychometrics of the Computer-Aided Measure of Chinese Handwriting Legibility (CAM-CHL) and to investigate Chinese handwriting legibility in school-age children using the CAM-CHL."
CALM1 affects APS
| 9
APS binds CALM1. 9 / 9
| 9

sparser
"People with type 1 diabetes using four different AID systems [Minimed™780G (MM780G), Accu-Chek® Insight-Diabeloop (DBLG), Tandem-Control-IQ, and Ypsopump Cambridge HCL-app (Cam-APS)] were included in the study."

sparser
"174 patients (60: MM780G, 45: DBLG, 30: Control-IQ, 39: Cam-APS), aged 18–73, predominantly women, were enrolled."

sparser
"Among the 174 participants in the study, 4 different systems were used: 60 with MM780G, 45 with DBLG, 30 with Control-IQ and 39 with Cam-APS."

sparser
"Specifically, the use of previous insulin pump was significantly higher (87%) in MM780G-group and lower (59%) in CAM-APS group and DLBG system users had significantly longer duration of diabetes than the other groups."

sparser
"After three months, 50% of MM780G and Cam-APS users, as well as approximately 40% of Control-IQ and DBLG users, had achieved the goal."

sparser
"Our sample shows a similar phenomenon, with a significant increase in TIR after 12 months of the implementation of an AID system, which is achieved at 3 months, regardless of the system used, with the exception of the Cam-APS system where TIR values decrease from the first 3 months to 1 year."

sparser
"In contrast, although 50% of patients in the Cam-APS group achieved the target at three months, only 28.7% maintained this control at 1 year."

sparser
"To enhance clinical applicability and interpretation, our meta-analysis incorporated focused subgroup analyses of two prominent HCL systems extensively studied in individual trials: the Cam-APS FX Closed-Loop system and the Medtronic MiniMed 670G HCL system."

sparser
"Interestingly, despite the Cam-APS FX being the only licensed system to utilize ultra-rapid-acting insulin (URAI) analogs ( xref ), our analysis uncovered a lack of substantial glycemic improvement coupled with a higher frequency of adverse events when using URAI analogs with this system."
8 |
Valproic acid increases the amount of CALM1. 8 / 8
8 |

No evidence text available

No evidence text available

No evidence text available

No evidence text available

No evidence text available

No evidence text available

No evidence text available

No evidence text available
Sestd1 affects CALM1
| 8
| 8

sparser
"The results indicated that CAM release from all formulations best fit the first-order kinetics model, as evidenced by higher correlation coefficients: 0.9981 ± 0.025 for CAM gel, 0.9894 ± 0.011 for CAM-BE gel, 0.9782 ± 0.021 for CAM-ES gel, and 0.9922 ± 0.018 for CAM-SOL."

sparser
"These values were significantly higher than those obtained from the zero-order model (0.5145 ± 0.014, 0.6242 ± 0.011, 0.5751 ± 0.024, and 0.4150 ± 0.10 for CAM gel, CAM-BE gel, CAM-ES gel, and CAM-SOL, respectively) and the Higuchi diffusion model (0.8081 ± 0.096, 0.8475 ± 0.017, 0.8203 ± 0.035, and 0.7240 ± 0.016, respectively)."

sparser
"Every CAM hydrogel preparation had n values in the range of 0.5 and 1.0 with values of 0.9151 ± 0.022 for CAM gel, 0.8602 ± 0.021 for CAM-BE gel, 0.8481 ± 0.035 for CAM-ES gel, and 0.8674 ± 0.012 for CAM-SOL, suggesting non-Fickian (anomalous) spread."

sparser
"According to xref , the results showed that after 36 h, the amount of CAM that penetrated the CAM-BE gel formulation was considerably (P<0.001) higher, at 154.37 ± 3.92 μg/cm 2 compared to 101.38 ± 2.79 μg/cm 2 , 136.02 ± 3.35 μg/cm 2 and 129.08 ± 5.10 μg/cm 2 obtained from CAM gel, CAM-ES gel and CAM-SOL."

sparser
"The synergistic effect of ethanol and PG association may be responsible for the higher skin deposition of 17.77 ± 1.13 μg/cm 2 of CAM-BE gel compared to 7.560 ± 0.86 μg/cm 2 , 14.01 ± 0.58 μg/cm 2 , and 5.434 ± 1.19 μg/cm 2 of CAM gel, CAM-ES gel, and CAM-SOL, respectively."

sparser
"The higher deposition showed that CAM-BE gel accumulated for a longer period of time in the skin, serving as a reservoir and permitting CAM to function for an extended period of time at the nearby tissue of the skin’s deep layers in between treatments. xref , xref When compared to both CAM gel and CAM-SOL, the ethosomes’ ethanol, phospholipid, and edge activator considerably enhanced CAM penetration and epidermal deposition, according to earlier experimental findings."

sparser
"Related studies have shown that it is of quite interest to study the changes in lipid CH 2 in the stratum corneum, xref and the literature suggests that the position of the peaks in the spectra is due to the stretching vibrations of SC lipids, and the (-CH 2 ) asymmetric stretching vibration band of the treated skin in the PBS group appeared at 2926.31 cm −1 , which shifted to higher wave numbers after the CAM-SOL and CAM-ES, and CAM-BE treatment shifted to higher wave numbers (2927.56 cm −1 , 2929.49 cm −1 and 2940.60 cm −1 ), respectively."

sparser
"The Area 2850 peak’s decline indicated that the sample had an impact on the stratum corneum that included lipid extraction. xref Additionally, the peak’s shift to a higher wavenumber suggested that the stratum corneum’s intercellular lipid problem had increased and the CH 2 symmetric (2850 cm −1 ) vibration band of the treated skin in the CAM-SOL group appeared at 2854.27 cm −1 , which shifted to higher wave numbers after the PBS and CAM-ES, and CAM-BE treatment shifted to higher wave numbers (2853.31 cm −1 , 2852.34 cm −1 , and 2850.85 cm −1 ), respectively."
XPO1 affects MLLT10
| 8
| 8

sparser
"The observation that CRM1 binds Hoxa chromatin in CALM-AF10 expressing MEFs led us to question whether CRM1 is also present at HOXA loci in leukemia cells."

sparser
"We have demonstrated that in addition to mediating nuclear export of CALM-AF10, the interaction of CRM1 with CALM-AF10 directly regulates HOXA cluster gene expression."

sparser
"We have demonstrated that a CRM1-AF10 fusion protein phenocopies CALM-AF10 in its ability to bind and activate Hoxa and Meis1 genes and to induce leukemia, supporting a model in which CRM1 enables the tethering of CALM-AF10 to Hoxa and Meis1 effector genes, thereby recruiting the AF10/DOT1L transcriptional complex and causing leukemia."

sparser
"CALM-AF10 interacts with Crm1 via a Nuclear Export Signal (NES) contained in the CALM moiety, and mutation of the NES or pharmacological inhibition of the Crm1/NES interaction abolishes the ability of CALM-AF10 to bind to and activate the transcription of Hoxa genes."

sparser
"Interaction of CALM-AF10 with CRM1 is necessary to upregulate Hoxa gene expression."

sparser
"Together, these results suggest that the interaction of CALM-AF10 with CRM1 is necessary for upregulation of Hoxa cluster gene expression."

sparser
"Our results thus far support a model in which CALM-AF10 must interact with CRM1 (via the NES) to upregulate Hoxa gene transcription."

sparser
"Our observation that CALM-AF10 interacts with Hoxa chromatin in a CRM1-dependent manner led us to hypothesize that CRM1 itself may bind Hoxa loci thus allowing for recruitment of CALM-AF10."
RIT2 affects CALM1
1 1 | 1 5
1 1 | 1 5

reach
"RIT2 binds with human CALM1, which interacts with SNCA and MAPT; thus, RIT2 may be involved in the same pathogenic pathway as SNCA and MAPT in PD ( Pankratz et al., 2012 )."

No evidence text available

sparser
"GTP-binding protein Rit2 binds to calmodulin 1 (phosphorylase kinase, delta), which also binds to both tau and αsyn [ xref ]."

sparser
"It is likely that in this manner, i.e., via ROC2-CAM interactions, rolB also exerts its modulating effect on calcium-dependent protein kinases xref ."

sparser
"RIT2 binds to calmodulin 1, a phosphorylase kinase, which binds to the products of SNCA and MAPT , susceptibility genes for PD xref ."

sparser
"Some researchers found that RIT2 protein binds to calmodulin 1, a phosphorylase kinase, which binds to alpha-synuclein and microtubule-associated protein tau, suggesting RIT2 may share the same pathwa[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

No evidence text available

sparser
"RIT2 binds with human CALM1, which interacts with SNCA and MAPT; thus, RIT2 may be involved in the same pathogenic pathway as SNCA and MAPT in PD ( Pankratz et al., 2012 )."
MLLT10 affects XPO1
| 8
| 8

sparser
"The observation that CRM1 binds Hoxa chromatin in CALM-AF10 expressing MEFs led us to question whether CRM1 is also present at HOXA loci in leukemia cells."

sparser
"We have demonstrated that in addition to mediating nuclear export of CALM-AF10, the interaction of CRM1 with CALM-AF10 directly regulates HOXA cluster gene expression."

sparser
"We have demonstrated that a CRM1-AF10 fusion protein phenocopies CALM-AF10 in its ability to bind and activate Hoxa and Meis1 genes and to induce leukemia, supporting a model in which CRM1 enables the tethering of CALM-AF10 to Hoxa and Meis1 effector genes, thereby recruiting the AF10/DOT1L transcriptional complex and causing leukemia."

sparser
"CALM-AF10 interacts with Crm1 via a Nuclear Export Signal (NES) contained in the CALM moiety, and mutation of the NES or pharmacological inhibition of the Crm1/NES interaction abolishes the ability of CALM-AF10 to bind to and activate the transcription of Hoxa genes."

sparser
"Interaction of CALM-AF10 with CRM1 is necessary to upregulate Hoxa gene expression."

sparser
"Together, these results suggest that the interaction of CALM-AF10 with CRM1 is necessary for upregulation of Hoxa cluster gene expression."

sparser
"Our results thus far support a model in which CALM-AF10 must interact with CRM1 (via the NES) to upregulate Hoxa gene transcription."

sparser
"Our observation that CALM-AF10 interacts with Hoxa chromatin in a CRM1-dependent manner led us to hypothesize that CRM1 itself may bind Hoxa loci thus allowing for recruitment of CALM-AF10."
LFA_1 affects CALM1
| 2 6
| 2 6

sparser
"Perhaps the interaction of LFA-1 with I-CAM delivers signals to the CTL which can act in an additive way with signals via the TcR/CD3 complex for optimal killing activity."

sparser
"Recent studies have shown that hepatic CD8 + Trm cells adhere to the liver via LFA-1, and the residence of CD8 + T cells in the hepatic sinusoid depends on the LFA-1-I/CAM-1 interaction ( xref )."

sparser
"The prevention of LFA-1 and CAM-1 interaction by lifitegrast presumably reduces further T-cell mediated inflammation [86] ."

reach
"Some of the bicyclic [5,5] hydantoin scaffold having fluorine and chlorine are found to be potent inhibitors of the LFA-1 and CAM interaction and farnesyl transferase [24]."

sparser
"Our investigations show no response to LFA-1/ICAM-1 alone, but that costimulation by LFA-1/CAM-1 interaction induces prolonged inositol phospholipid hydrolysis (up to 4 h), resulting in generation of both inositol(1,4,5)phosphate3 and inositol(1,3,4,5)phosphate4 and their derivatives."

reach
"The prevention of LFA-1 and CAM-1 interaction by lifitegrast presumably reduces further T-cell mediated inflammation [86] ."

sparser
"Stimulation of the CXCR2 receptor leads to the activation of the ß2-integrins LFA-1 and Mac-1, which interact with I-CAM on the surface of the endothelial cell leading to firm adhesion [5] ."

sparser
"A = lack of M H C classI antigen expression by tumour cells permitting escape from cytolytic T-cells; B=sheddingofI-CAM-1 into circulation may block T-cell receptors for this molecule and prevent tumour cell/cytolytic cell interactions; C=Tcells binding to classI antigen and D = stabilisation in association with I-CAM-1/LFA-1 interaction."
KCNQ2 affects CALM1
3 1 | 4
3 1 | 4

No evidence text available

No evidence text available

reach
"These results indicated that SUMOylation of Kv7.2 and Kv7.3 specifically regulates their binding with CaM1.To verify the role of SUMOylation of Kv7.2 and Kv7.3 in their binding with CaM1, these plasmids were transfected with SUMO2, and the co-IP results showed that SUMO2 significantly enhanced the binding of both Kv7.2 and Kv7.3 with CaM1 (Fig. 4F)."

reach
"To further investigate the role of SUMOylation in the binding of Kv7.2 and Kv7.3 with CaM1, we detected whether loss of SUMOylation of Kv7.2 and Kv7.3 affects the interaction between Kv7.2 or Kv7.3 and CaM1."

No evidence text available

reach
"Taken together, these results showed that SUMOylation plays a critical role in the interaction of Kv7.2 and Kv7.3 with CaM1 and the assembly of Kv7.2 and Kv7.3."

reach
"Because SUMOylation regulates the interaction between Kv7.2 or Kv7.3 and CaM1, we asked whether retigabine regulates the interaction between Kv7.2 or Kv7.3 and CaM1."

No evidence text available
HSPA5 affects CALM1
| 8
| 8

sparser
"This shows directly that the increase of ATPase activity upon addition to the BiP/C H 3-CAM complex results from the displacement of the protein substrate and not the formation of a ternary complex in[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"To address this question, we formed complexes of BiP and C H 3-CAM as described previously."

sparser
"On binary logistic regression analysis, serum GRP78 was independently associated with CAM (OR [95% CI], 1.011 [1.002–1.019]) after adjusting for diabetes mellitus and hypoxemia during acute COVID-19 (Table xref )."

sparser
"However, the multivariate analysis and the subgroup analysis suggest GRP78 to be independently associated with CAM after adjusting for diabetes."

sparser
"In order to investigate whether this interaction involves the peptide-binding site of BiP, we determined the influence of peptides HD14 (PGRSLRL) and HD125 (SSASTKG) derived from the sequence of the a[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"According to equation (2) , the K D value for peptide HD14 was determined to be 3.4 μM, which is in good agreement with values obtained earlier for viral or antibody pepti[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Therefore, we investigated whether the presence of ATP had any effect on the formation of the C H 3-CAMBiP complex."

sparser
"However, even at low concentrations of ATP (50 μM), it was not possible to detect any interaction between BiP and C H 3-CAM by analytical gel-filtration."
CARF affects CALM1
| 8
| 8

sparser
"We found that cA 6 occupies, but does not entirely fit, the same pocket of the Nh Cam1-CARF dimer that binds cA 4 (Extended Data Fig. xref )."

sparser
"Notably, the apo Nh Cam1-CARF dimer crystal structure aligned to the CARF domain of the model with a root mean-squared deviation of 0.44 Å."

sparser
"Structural and biochemical analyses reveal that the CARF domains of a Cam1 dimer bind cyclic tetra-adenylate second messengers."

sparser
"We next grew crystals and solved the structure Nh Cam1-CARF (residues 42–206) in the absence and presence of bound cA 4 ."

sparser
"The 2.2 Å-resolution X-ray structure without the ligand showed that Nh Cam1-CARF adopts a domain-swapped dimeric topology, in which the β7 strand of one monomer completes the folding topology of a second monomer by pairing with its β6 strand (Fig. xref and Extended Data Fig. xref )."

sparser
"By contrast, the 2.1 Å X-ray structure of Nh Cam1-CARF bound to cA 4 shows that it adopts a dimeric fold with no domain swap between the monomers (Fig. xref )."

sparser
"Loop L2 adopts different conformations in each monomer of the Nh Cam1-CARF dimer in the complex, with the N and C termini being in close proximity in one monomer but far apart in the other monomer, owing to crystal packing forces."

sparser
"Finally, despite not observing binding of cA 6 in our ITC experiments (Extended Data Fig. xref ), we were able to crystallize and solve the 1.9 Å X-ray structure of Nh Cam1-CARF (residues 42–206) bound to this ligand."
CALM1 affects sestd1
| 8
| 8

sparser
"The results indicated that CAM release from all formulations best fit the first-order kinetics model, as evidenced by higher correlation coefficients: 0.9981 ± 0.025 for CAM gel, 0.9894 ± 0.011 for CAM-BE gel, 0.9782 ± 0.021 for CAM-ES gel, and 0.9922 ± 0.018 for CAM-SOL."

sparser
"These values were significantly higher than those obtained from the zero-order model (0.5145 ± 0.014, 0.6242 ± 0.011, 0.5751 ± 0.024, and 0.4150 ± 0.10 for CAM gel, CAM-BE gel, CAM-ES gel, and CAM-SOL, respectively) and the Higuchi diffusion model (0.8081 ± 0.096, 0.8475 ± 0.017, 0.8203 ± 0.035, and 0.7240 ± 0.016, respectively)."

sparser
"Every CAM hydrogel preparation had n values in the range of 0.5 and 1.0 with values of 0.9151 ± 0.022 for CAM gel, 0.8602 ± 0.021 for CAM-BE gel, 0.8481 ± 0.035 for CAM-ES gel, and 0.8674 ± 0.012 for CAM-SOL, suggesting non-Fickian (anomalous) spread."

sparser
"According to xref , the results showed that after 36 h, the amount of CAM that penetrated the CAM-BE gel formulation was considerably (P<0.001) higher, at 154.37 ± 3.92 μg/cm 2 compared to 101.38 ± 2.79 μg/cm 2 , 136.02 ± 3.35 μg/cm 2 and 129.08 ± 5.10 μg/cm 2 obtained from CAM gel, CAM-ES gel and CAM-SOL."

sparser
"The synergistic effect of ethanol and PG association may be responsible for the higher skin deposition of 17.77 ± 1.13 μg/cm 2 of CAM-BE gel compared to 7.560 ± 0.86 μg/cm 2 , 14.01 ± 0.58 μg/cm 2 , and 5.434 ± 1.19 μg/cm 2 of CAM gel, CAM-ES gel, and CAM-SOL, respectively."

sparser
"The higher deposition showed that CAM-BE gel accumulated for a longer period of time in the skin, serving as a reservoir and permitting CAM to function for an extended period of time at the nearby tissue of the skin’s deep layers in between treatments. xref , xref When compared to both CAM gel and CAM-SOL, the ethosomes’ ethanol, phospholipid, and edge activator considerably enhanced CAM penetration and epidermal deposition, according to earlier experimental findings."

sparser
"Related studies have shown that it is of quite interest to study the changes in lipid CH 2 in the stratum corneum, xref and the literature suggests that the position of the peaks in the spectra is due to the stretching vibrations of SC lipids, and the (-CH 2 ) asymmetric stretching vibration band of the treated skin in the PBS group appeared at 2926.31 cm −1 , which shifted to higher wave numbers after the CAM-SOL and CAM-ES, and CAM-BE treatment shifted to higher wave numbers (2927.56 cm −1 , 2929.49 cm −1 and 2940.60 cm −1 ), respectively."

sparser
"The Area 2850 peak’s decline indicated that the sample had an impact on the stratum corneum that included lipid extraction. xref Additionally, the peak’s shift to a higher wavenumber suggested that the stratum corneum’s intercellular lipid problem had increased and the CH 2 symmetric (2850 cm −1 ) vibration band of the treated skin in the CAM-SOL group appeared at 2854.27 cm −1 , which shifted to higher wave numbers after the PBS and CAM-ES, and CAM-BE treatment shifted to higher wave numbers (2853.31 cm −1 , 2852.34 cm −1 , and 2850.85 cm −1 ), respectively."
CALM1 affects endocytosis
| 6 2
CALM1 activates endocytosis.
| 6
| 6

reach
"Postsynaptically, CALM can modulate the abundance of GluA2 at the postsynaptic membrane by influencing its endocytosis, indicating a possible role of CALM in AMPA receptor dysfunction in AD."

reach
"Recent studies by Muro et al. [35,37] revealed that to internalise anti-ICAM and anti-PECAM conjugates via constitutively non internalisable determinants ECs employ a novel, previously unknown internalisation pathway, which differs from clathrin- and caveoli mediated endocytosis and CAM mediated endocytosis."

reach
"Amiloride hinders Na +/H+ exchange in macropinocytosis and nonclassical CAM mediated endocytosis [16,17]."

reach
"The fact that this process takes place only in the case of multimeric ligands incubated with cells at 37degreesC, but not at 4degreesC, indicates that CAM mediated endocytosis is an active process, with close similarities to typical receptor mediated endocytosis (Muro et al., 2008)."

reach
"Multivalent conjugates of 100 - 300 nm diameter, consisting of antioxidant enzymes (AOE, Cat and SOD) and carrier PECAM-1 or ICAM-1 antibodies, bind to ECs, enter cells via CAM mediated endocytosis and detoxify ROS in the cell interior."

reach
"Anti-ICAM and ASM nanocarriers were found to enter cells by means of CAM mediated endocytosis, that is, to bypass the clathrin dependent pathway, and to traffic to lysosomes."
CALM1 inhibits endocytosis.
| 2
| 2

sparser
"Although the presence of this domain was required for CALM-AF10 to inhibit transferrin endocytosis in a transfected human cell line, internalization of growth factor receptors and their signaling was not affected in leukemia cells lines or in primary leukemia cells isolated from mice transplanted with cells transduced with CALM-AF10."

sparser
"CALM-AF10 inhibits clathrin-mediated endocytosis in 293T cells."
CALM1 affects XPO1
| 8
| 8

sparser
"The observation that CRM1 binds Hoxa chromatin in CALM-AF10 expressing MEFs led us to question whether CRM1 is also present at HOXA loci in leukemia cells."

sparser
"We have demonstrated that in addition to mediating nuclear export of CALM-AF10, the interaction of CRM1 with CALM-AF10 directly regulates HOXA cluster gene expression."

sparser
"We have demonstrated that a CRM1-AF10 fusion protein phenocopies CALM-AF10 in its ability to bind and activate Hoxa and Meis1 genes and to induce leukemia, supporting a model in which CRM1 enables the tethering of CALM-AF10 to Hoxa and Meis1 effector genes, thereby recruiting the AF10/DOT1L transcriptional complex and causing leukemia."

sparser
"CALM-AF10 interacts with Crm1 via a Nuclear Export Signal (NES) contained in the CALM moiety, and mutation of the NES or pharmacological inhibition of the Crm1/NES interaction abolishes the ability of CALM-AF10 to bind to and activate the transcription of Hoxa genes."

sparser
"Interaction of CALM-AF10 with CRM1 is necessary to upregulate Hoxa gene expression."

sparser
"Together, these results suggest that the interaction of CALM-AF10 with CRM1 is necessary for upregulation of Hoxa cluster gene expression."

sparser
"Our results thus far support a model in which CALM-AF10 must interact with CRM1 (via the NES) to upregulate Hoxa gene transcription."

sparser
"Our observation that CALM-AF10 interacts with Hoxa chromatin in a CRM1-dependent manner led us to hypothesize that CRM1 itself may bind Hoxa loci thus allowing for recruitment of CALM-AF10."
CALM1 affects RIT2
1 1 | 1 5
1 1 | 1 5

reach
"RIT2 binds with human CALM1, which interacts with SNCA and MAPT; thus, RIT2 may be involved in the same pathogenic pathway as SNCA and MAPT in PD ( Pankratz et al., 2012 )."

No evidence text available

sparser
"GTP-binding protein Rit2 binds to calmodulin 1 (phosphorylase kinase, delta), which also binds to both tau and αsyn [ xref ]."

sparser
"It is likely that in this manner, i.e., via ROC2-CAM interactions, rolB also exerts its modulating effect on calcium-dependent protein kinases xref ."

sparser
"RIT2 binds to calmodulin 1, a phosphorylase kinase, which binds to the products of SNCA and MAPT , susceptibility genes for PD xref ."

sparser
"Some researchers found that RIT2 protein binds to calmodulin 1, a phosphorylase kinase, which binds to alpha-synuclein and microtubule-associated protein tau, suggesting RIT2 may share the same pathwa[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

No evidence text available

sparser
"RIT2 binds with human CALM1, which interacts with SNCA and MAPT; thus, RIT2 may be involved in the same pathogenic pathway as SNCA and MAPT in PD ( Pankratz et al., 2012 )."
CALM1 affects MLLT10, and XPO1
| 8
| 8

sparser
"The observation that CRM1 binds Hoxa chromatin in CALM-AF10 expressing MEFs led us to question whether CRM1 is also present at HOXA loci in leukemia cells."

sparser
"We have demonstrated that in addition to mediating nuclear export of CALM-AF10, the interaction of CRM1 with CALM-AF10 directly regulates HOXA cluster gene expression."

sparser
"We have demonstrated that a CRM1-AF10 fusion protein phenocopies CALM-AF10 in its ability to bind and activate Hoxa and Meis1 genes and to induce leukemia, supporting a model in which CRM1 enables the tethering of CALM-AF10 to Hoxa and Meis1 effector genes, thereby recruiting the AF10/DOT1L transcriptional complex and causing leukemia."

sparser
"CALM-AF10 interacts with Crm1 via a Nuclear Export Signal (NES) contained in the CALM moiety, and mutation of the NES or pharmacological inhibition of the Crm1/NES interaction abolishes the ability of CALM-AF10 to bind to and activate the transcription of Hoxa genes."

sparser
"Interaction of CALM-AF10 with CRM1 is necessary to upregulate Hoxa gene expression."

sparser
"Together, these results suggest that the interaction of CALM-AF10 with CRM1 is necessary for upregulation of Hoxa cluster gene expression."

sparser
"Our results thus far support a model in which CALM-AF10 must interact with CRM1 (via the NES) to upregulate Hoxa gene transcription."

sparser
"Our observation that CALM-AF10 interacts with Hoxa chromatin in a CRM1-dependent manner led us to hypothesize that CRM1 itself may bind Hoxa loci thus allowing for recruitment of CALM-AF10."
CALM1 affects LFA_1
| 2 6
| 2 6

sparser
"Perhaps the interaction of LFA-1 with I-CAM delivers signals to the CTL which can act in an additive way with signals via the TcR/CD3 complex for optimal killing activity."

sparser
"Recent studies have shown that hepatic CD8 + Trm cells adhere to the liver via LFA-1, and the residence of CD8 + T cells in the hepatic sinusoid depends on the LFA-1-I/CAM-1 interaction ( xref )."

sparser
"The prevention of LFA-1 and CAM-1 interaction by lifitegrast presumably reduces further T-cell mediated inflammation [86] ."

reach
"Some of the bicyclic [5,5] hydantoin scaffold having fluorine and chlorine are found to be potent inhibitors of the LFA-1 and CAM interaction and farnesyl transferase [24]."

sparser
"Our investigations show no response to LFA-1/ICAM-1 alone, but that costimulation by LFA-1/CAM-1 interaction induces prolonged inositol phospholipid hydrolysis (up to 4 h), resulting in generation of both inositol(1,4,5)phosphate3 and inositol(1,3,4,5)phosphate4 and their derivatives."

reach
"The prevention of LFA-1 and CAM-1 interaction by lifitegrast presumably reduces further T-cell mediated inflammation [86] ."

sparser
"Stimulation of the CXCR2 receptor leads to the activation of the ß2-integrins LFA-1 and Mac-1, which interact with I-CAM on the surface of the endothelial cell leading to firm adhesion [5] ."

sparser
"A = lack of M H C classI antigen expression by tumour cells permitting escape from cytolytic T-cells; B=sheddingofI-CAM-1 into circulation may block T-cell receptors for this molecule and prevent tumour cell/cytolytic cell interactions; C=Tcells binding to classI antigen and D = stabilisation in association with I-CAM-1/LFA-1 interaction."
CALM1 affects KCNQ2
3 1 | 4
3 1 | 4

No evidence text available

No evidence text available

reach
"These results indicated that SUMOylation of Kv7.2 and Kv7.3 specifically regulates their binding with CaM1.To verify the role of SUMOylation of Kv7.2 and Kv7.3 in their binding with CaM1, these plasmids were transfected with SUMO2, and the co-IP results showed that SUMO2 significantly enhanced the binding of both Kv7.2 and Kv7.3 with CaM1 (Fig. 4F)."

reach
"To further investigate the role of SUMOylation in the binding of Kv7.2 and Kv7.3 with CaM1, we detected whether loss of SUMOylation of Kv7.2 and Kv7.3 affects the interaction between Kv7.2 or Kv7.3 and CaM1."

No evidence text available

reach
"Taken together, these results showed that SUMOylation plays a critical role in the interaction of Kv7.2 and Kv7.3 with CaM1 and the assembly of Kv7.2 and Kv7.3."

reach
"Because SUMOylation regulates the interaction between Kv7.2 or Kv7.3 and CaM1, we asked whether retigabine regulates the interaction between Kv7.2 or Kv7.3 and CaM1."

No evidence text available
CALM1 affects HSPA5
| 8
| 8

sparser
"This shows directly that the increase of ATPase activity upon addition to the BiP/C H 3-CAM complex results from the displacement of the protein substrate and not the formation of a ternary complex in[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"To address this question, we formed complexes of BiP and C H 3-CAM as described previously."

sparser
"On binary logistic regression analysis, serum GRP78 was independently associated with CAM (OR [95% CI], 1.011 [1.002–1.019]) after adjusting for diabetes mellitus and hypoxemia during acute COVID-19 (Table xref )."

sparser
"However, the multivariate analysis and the subgroup analysis suggest GRP78 to be independently associated with CAM after adjusting for diabetes."

sparser
"In order to investigate whether this interaction involves the peptide-binding site of BiP, we determined the influence of peptides HD14 (PGRSLRL) and HD125 (SSASTKG) derived from the sequence of the a[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"According to equation (2) , the K D value for peptide HD14 was determined to be 3.4 μM, which is in good agreement with values obtained earlier for viral or antibody pepti[MISSING/INVALID CREDENTIALS: limited to 200 char for Elsevier]"

sparser
"Therefore, we investigated whether the presence of ATP had any effect on the formation of the C H 3-CAMBiP complex."

sparser
"However, even at low concentrations of ATP (50 μM), it was not possible to detect any interaction between BiP and C H 3-CAM by analytical gel-filtration."
CALM1 affects CSNK2A1
3 4 | 1
3 4 | 1

No evidence text available

No evidence text available

No evidence text available

sparser
"As indicted from the co-crystal structure of CK2α-CAM187, the biaryl part of this molecule fitted into the α/β interface."

No evidence text available

No evidence text available

No evidence text available

No evidence text available
CALM1 affects CARF
| 8
| 8

sparser
"We found that cA 6 occupies, but does not entirely fit, the same pocket of the Nh Cam1-CARF dimer that binds cA 4 (Extended Data Fig. xref )."

sparser
"Notably, the apo Nh Cam1-CARF dimer crystal structure aligned to the CARF domain of the model with a root mean-squared deviation of 0.44 Å."

sparser
"Structural and biochemical analyses reveal that the CARF domains of a Cam1 dimer bind cyclic tetra-adenylate second messengers."

sparser
"We next grew crystals and solved the structure Nh Cam1-CARF (residues 42–206) in the absence and presence of bound cA 4 ."

sparser
"The 2.2 Å-resolution X-ray structure without the ligand showed that Nh Cam1-CARF adopts a domain-swapped dimeric topology, in which the β7 strand of one monomer completes the folding topology of a second monomer by pairing wit